Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2225 and Echvi_2226 are separated by 210 nucleotides Echvi_2226 and Echvi_2227 are separated by 397 nucleotides
Echvi_2225: Echvi_2225 - Transposase DDE domain./Transposase domain (DUF772)., at 2,648,306 to 2,649,658
_2225
Echvi_2226: Echvi_2226 - hypothetical protein, at 2,649,869 to 2,650,105
_2226
Echvi_2227: Echvi_2227 - Predicted signal-transduction protein containing cAMP-binding and CBS domains, at 2,650,503 to 2,652,392
_2227
Position (kb)
2649
2650
2651 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2648.950 kb on - strand, within Echvi_2225 at 2648.950 kb on - strand, within Echvi_2225 at 2649.764 kb on + strand at 2649.764 kb on + strand at 2649.783 kb on + strand at 2649.804 kb on + strand at 2649.809 kb on + strand at 2649.809 kb on + strand at 2649.870 kb on + strand at 2649.874 kb on + strand at 2649.875 kb on - strand at 2649.945 kb on - strand, within Echvi_2226 at 2649.948 kb on - strand, within Echvi_2226 at 2649.950 kb on + strand, within Echvi_2226 at 2649.963 kb on - strand, within Echvi_2226 at 2649.963 kb on - strand, within Echvi_2226 at 2649.963 kb on - strand, within Echvi_2226 at 2649.995 kb on + strand, within Echvi_2226 at 2650.018 kb on + strand, within Echvi_2226 at 2650.018 kb on + strand, within Echvi_2226 at 2650.018 kb on + strand, within Echvi_2226 at 2650.019 kb on - strand, within Echvi_2226 at 2650.120 kb on - strand at 2650.199 kb on - strand at 2650.292 kb on - strand at 2650.317 kb on + strand at 2650.317 kb on + strand at 2650.317 kb on + strand at 2650.317 kb on + strand at 2650.317 kb on + strand at 2650.318 kb on - strand at 2650.318 kb on - strand at 2650.319 kb on + strand at 2650.399 kb on + strand at 2650.400 kb on - strand at 2650.453 kb on + strand at 2650.454 kb on - strand at 2650.504 kb on + strand at 2650.688 kb on - strand at 2650.690 kb on + strand at 2650.690 kb on + strand at 2650.690 kb on + strand at 2650.690 kb on + strand at 2650.694 kb on - strand, within Echvi_2227 at 2650.694 kb on - strand, within Echvi_2227 at 2650.705 kb on - strand, within Echvi_2227 at 2650.710 kb on + strand, within Echvi_2227 at 2650.710 kb on + strand, within Echvi_2227 at 2650.711 kb on - strand, within Echvi_2227 at 2650.713 kb on + strand, within Echvi_2227 at 2650.714 kb on - strand, within Echvi_2227 at 2650.730 kb on + strand, within Echvi_2227 at 2650.730 kb on + strand, within Echvi_2227 at 2650.769 kb on + strand, within Echvi_2227 at 2650.832 kb on + strand, within Echvi_2227 at 2650.832 kb on + strand, within Echvi_2227 at 2650.913 kb on - strand, within Echvi_2227 at 2650.913 kb on - strand, within Echvi_2227 at 2650.965 kb on + strand, within Echvi_2227 at 2650.965 kb on + strand, within Echvi_2227 at 2650.965 kb on + strand, within Echvi_2227 at 2650.982 kb on - strand, within Echvi_2227 at 2651.021 kb on + strand, within Echvi_2227 at 2651.093 kb on - strand, within Echvi_2227 at 2651.093 kb on - strand, within Echvi_2227
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 2,648,950 - Echvi_2225 0.48 +0.4 2,648,950 - Echvi_2225 0.48 +2.5 2,649,764 + -0.4 2,649,764 + +0.5 2,649,783 + +0.2 2,649,804 + +1.0 2,649,809 + +0.2 2,649,809 + +1.6 2,649,870 + +1.1 2,649,874 + -0.2 2,649,875 - -0.7 2,649,945 - Echvi_2226 0.32 -0.6 2,649,948 - Echvi_2226 0.33 -1.1 2,649,950 + Echvi_2226 0.34 +1.0 2,649,963 - Echvi_2226 0.40 -0.9 2,649,963 - Echvi_2226 0.40 +0.5 2,649,963 - Echvi_2226 0.40 +0.2 2,649,995 + Echvi_2226 0.53 -1.8 2,650,018 + Echvi_2226 0.63 -0.6 2,650,018 + Echvi_2226 0.63 +0.6 2,650,018 + Echvi_2226 0.63 +0.5 2,650,019 - Echvi_2226 0.63 +1.4 2,650,120 - +0.4 2,650,199 - -0.4 2,650,292 - -1.2 2,650,317 + -0.5 2,650,317 + -0.2 2,650,317 + -0.0 2,650,317 + -0.2 2,650,317 + +0.3 2,650,318 - -0.0 2,650,318 - -0.3 2,650,319 + -0.8 2,650,399 + +0.3 2,650,400 - -0.2 2,650,453 + -0.5 2,650,454 - -0.8 2,650,504 + -0.2 2,650,688 - -1.2 2,650,690 + +0.2 2,650,690 + -1.0 2,650,690 + +1.5 2,650,690 + +0.4 2,650,694 - Echvi_2227 0.10 +0.7 2,650,694 - Echvi_2227 0.10 -0.2 2,650,705 - Echvi_2227 0.11 +0.2 2,650,710 + Echvi_2227 0.11 +0.6 2,650,710 + Echvi_2227 0.11 -1.0 2,650,711 - Echvi_2227 0.11 +1.3 2,650,713 + Echvi_2227 0.11 -0.8 2,650,714 - Echvi_2227 0.11 -1.0 2,650,730 + Echvi_2227 0.12 -1.0 2,650,730 + Echvi_2227 0.12 -0.4 2,650,769 + Echvi_2227 0.14 -0.0 2,650,832 + Echvi_2227 0.17 -0.2 2,650,832 + Echvi_2227 0.17 +1.1 2,650,913 - Echvi_2227 0.22 -2.5 2,650,913 - Echvi_2227 0.22 -0.2 2,650,965 + Echvi_2227 0.24 +1.5 2,650,965 + Echvi_2227 0.24 +0.6 2,650,965 + Echvi_2227 0.24 -0.2 2,650,982 - Echvi_2227 0.25 +0.1 2,651,021 + Echvi_2227 0.27 -0.6 2,651,093 - Echvi_2227 0.31 +0.0 2,651,093 - Echvi_2227 0.31 +0.5
Or see this region's nucleotide sequence