Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1727 and Echvi_1728 are separated by 13 nucleotides Echvi_1728 and Echvi_1729 are separated by 220 nucleotides
Echvi_1727: Echvi_1727 - ABC-type multidrug transport system, ATPase and permease components, at 2,035,800 to 2,037,575
_1727
Echvi_1728: Echvi_1728 - pseudouridylate synthase I, at 2,037,589 to 2,038,344
_1728
Echvi_1729: Echvi_1729 - hypothetical protein, at 2,038,565 to 2,039,044
_1729
Position (kb)
2037
2038
2039 Strain fitness (log2 ratio)
-1
0
1
2 at 2036.620 kb on - strand, within Echvi_1727 at 2036.680 kb on - strand, within Echvi_1727 at 2036.689 kb on + strand, within Echvi_1727 at 2036.696 kb on + strand, within Echvi_1727 at 2036.697 kb on - strand, within Echvi_1727 at 2036.697 kb on - strand, within Echvi_1727 at 2036.709 kb on + strand, within Echvi_1727 at 2036.710 kb on - strand, within Echvi_1727 at 2036.722 kb on - strand, within Echvi_1727 at 2036.744 kb on + strand, within Echvi_1727 at 2036.753 kb on - strand, within Echvi_1727 at 2036.807 kb on - strand, within Echvi_1727 at 2036.818 kb on + strand, within Echvi_1727 at 2036.818 kb on + strand, within Echvi_1727 at 2036.818 kb on + strand, within Echvi_1727 at 2036.819 kb on - strand, within Echvi_1727 at 2036.819 kb on - strand, within Echvi_1727 at 2036.819 kb on - strand, within Echvi_1727 at 2036.823 kb on + strand, within Echvi_1727 at 2036.901 kb on + strand, within Echvi_1727 at 2036.901 kb on + strand, within Echvi_1727 at 2036.902 kb on - strand, within Echvi_1727 at 2036.925 kb on - strand, within Echvi_1727 at 2036.927 kb on + strand, within Echvi_1727 at 2036.927 kb on + strand, within Echvi_1727 at 2036.927 kb on + strand, within Echvi_1727 at 2036.927 kb on + strand, within Echvi_1727 at 2036.927 kb on + strand, within Echvi_1727 at 2036.927 kb on + strand, within Echvi_1727 at 2036.928 kb on - strand, within Echvi_1727 at 2036.928 kb on - strand, within Echvi_1727 at 2036.928 kb on - strand, within Echvi_1727 at 2036.985 kb on + strand, within Echvi_1727 at 2037.008 kb on + strand, within Echvi_1727 at 2037.010 kb on + strand, within Echvi_1727 at 2037.042 kb on + strand, within Echvi_1727 at 2037.070 kb on - strand, within Echvi_1727 at 2037.099 kb on + strand, within Echvi_1727 at 2037.144 kb on + strand, within Echvi_1727 at 2037.174 kb on - strand, within Echvi_1727 at 2037.315 kb on + strand, within Echvi_1727 at 2037.328 kb on - strand, within Echvi_1727 at 2037.353 kb on - strand, within Echvi_1727 at 2037.366 kb on + strand, within Echvi_1727 at 2037.367 kb on - strand, within Echvi_1727 at 2037.458 kb on + strand at 2037.459 kb on - strand at 2037.459 kb on - strand at 2037.508 kb on + strand at 2037.509 kb on - strand at 2037.515 kb on + strand at 2037.615 kb on + strand at 2037.725 kb on - strand, within Echvi_1728 at 2037.786 kb on + strand, within Echvi_1728 at 2037.787 kb on - strand, within Echvi_1728 at 2038.007 kb on + strand, within Echvi_1728 at 2038.068 kb on - strand, within Echvi_1728 at 2038.165 kb on - strand, within Echvi_1728 at 2038.165 kb on - strand, within Echvi_1728 at 2038.326 kb on - strand at 2038.359 kb on - strand at 2038.467 kb on + strand at 2038.468 kb on - strand at 2038.475 kb on + strand at 2038.475 kb on + strand at 2038.476 kb on - strand at 2038.483 kb on - strand at 2038.498 kb on + strand at 2038.509 kb on - strand at 2038.509 kb on - strand at 2038.528 kb on + strand at 2039.158 kb on + strand at 2039.159 kb on - strand at 2039.200 kb on - strand at 2039.223 kb on + strand at 2039.224 kb on - strand at 2039.233 kb on + strand at 2039.242 kb on + strand at 2039.242 kb on + strand at 2039.270 kb on - strand at 2039.332 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 2,036,620 - Echvi_1727 0.46 -0.8 2,036,680 - Echvi_1727 0.50 +1.1 2,036,689 + Echvi_1727 0.50 +0.5 2,036,696 + Echvi_1727 0.50 -0.6 2,036,697 - Echvi_1727 0.51 +1.7 2,036,697 - Echvi_1727 0.51 -1.6 2,036,709 + Echvi_1727 0.51 -0.4 2,036,710 - Echvi_1727 0.51 -0.0 2,036,722 - Echvi_1727 0.52 -0.2 2,036,744 + Echvi_1727 0.53 -0.2 2,036,753 - Echvi_1727 0.54 +1.4 2,036,807 - Echvi_1727 0.57 +0.4 2,036,818 + Echvi_1727 0.57 -0.3 2,036,818 + Echvi_1727 0.57 +0.2 2,036,818 + Echvi_1727 0.57 +0.7 2,036,819 - Echvi_1727 0.57 +0.9 2,036,819 - Echvi_1727 0.57 +0.8 2,036,819 - Echvi_1727 0.57 +1.4 2,036,823 + Echvi_1727 0.58 +0.3 2,036,901 + Echvi_1727 0.62 +0.9 2,036,901 + Echvi_1727 0.62 -1.3 2,036,902 - Echvi_1727 0.62 +1.5 2,036,925 - Echvi_1727 0.63 +1.0 2,036,927 + Echvi_1727 0.63 +0.4 2,036,927 + Echvi_1727 0.63 -0.2 2,036,927 + Echvi_1727 0.63 -0.1 2,036,927 + Echvi_1727 0.63 +0.1 2,036,927 + Echvi_1727 0.63 -1.7 2,036,927 + Echvi_1727 0.63 -0.0 2,036,928 - Echvi_1727 0.64 -0.2 2,036,928 - Echvi_1727 0.64 -0.1 2,036,928 - Echvi_1727 0.64 -0.5 2,036,985 + Echvi_1727 0.67 -0.9 2,037,008 + Echvi_1727 0.68 -0.2 2,037,010 + Echvi_1727 0.68 +1.5 2,037,042 + Echvi_1727 0.70 +0.5 2,037,070 - Echvi_1727 0.72 +0.7 2,037,099 + Echvi_1727 0.73 +0.4 2,037,144 + Echvi_1727 0.76 -0.6 2,037,174 - Echvi_1727 0.77 -1.1 2,037,315 + Echvi_1727 0.85 -0.8 2,037,328 - Echvi_1727 0.86 -0.4 2,037,353 - Echvi_1727 0.87 -0.2 2,037,366 + Echvi_1727 0.88 -0.5 2,037,367 - Echvi_1727 0.88 +1.4 2,037,458 + -0.3 2,037,459 - -0.5 2,037,459 - -0.2 2,037,508 + -0.2 2,037,509 - +1.5 2,037,515 + +0.0 2,037,615 + +0.7 2,037,725 - Echvi_1728 0.18 -0.7 2,037,786 + Echvi_1728 0.26 -0.5 2,037,787 - Echvi_1728 0.26 +0.2 2,038,007 + Echvi_1728 0.55 -1.0 2,038,068 - Echvi_1728 0.63 -0.4 2,038,165 - Echvi_1728 0.76 -0.9 2,038,165 - Echvi_1728 0.76 -0.8 2,038,326 - +1.3 2,038,359 - -0.7 2,038,467 + -0.4 2,038,468 - +1.8 2,038,475 + -0.2 2,038,475 + -1.1 2,038,476 - -0.7 2,038,483 - -0.5 2,038,498 + -1.2 2,038,509 - +0.1 2,038,509 - +0.7 2,038,528 + +1.4 2,039,158 + +0.9 2,039,159 - -0.4 2,039,200 - +1.1 2,039,223 + +0.5 2,039,224 - -0.2 2,039,233 + -1.5 2,039,242 + -0.2 2,039,242 + +0.7 2,039,270 - -0.4 2,039,332 + +0.4
Or see this region's nucleotide sequence