Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1175

Experiment: L-Glutamic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_1175 and Echvi_1176 are separated by 128 nucleotides Echvi_1175: Echvi_1175 - Chloride channel protein EriC, at 1,351,981 to 1,353,756 _1175 Echvi_1176: Echvi_1176 - MazG family protein, at 1,353,885 to 1,354,685 _1176 Position (kb) 1351 1352 1353 1354Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1350.983 kb on + strandat 1350.989 kb on + strandat 1351.000 kb on - strandat 1351.002 kb on + strandat 1351.167 kb on + strandat 1351.181 kb on - strandat 1351.189 kb on + strandat 1351.189 kb on + strandat 1351.189 kb on + strandat 1351.190 kb on - strandat 1351.234 kb on + strandat 1351.235 kb on - strandat 1351.235 kb on - strandat 1351.261 kb on + strandat 1351.262 kb on - strandat 1351.301 kb on + strandat 1351.302 kb on - strandat 1351.302 kb on - strandat 1351.319 kb on - strandat 1351.319 kb on - strandat 1351.319 kb on - strandat 1351.319 kb on - strandat 1351.324 kb on - strandat 1351.324 kb on - strandat 1351.344 kb on - strandat 1351.427 kb on - strandat 1351.450 kb on + strandat 1351.451 kb on - strandat 1351.451 kb on - strandat 1351.451 kb on - strandat 1351.480 kb on + strandat 1351.480 kb on + strandat 1351.481 kb on - strandat 1351.488 kb on + strandat 1351.488 kb on + strandat 1351.524 kb on + strandat 1351.525 kb on - strandat 1351.525 kb on - strandat 1351.526 kb on + strandat 1351.526 kb on + strandat 1351.527 kb on - strandat 1351.608 kb on + strandat 1351.970 kb on - strandat 1351.977 kb on + strandat 1351.983 kb on - strandat 1352.003 kb on - strandat 1352.054 kb on + strandat 1352.054 kb on + strandat 1352.054 kb on + strandat 1352.058 kb on + strandat 1352.058 kb on + strandat 1352.059 kb on - strandat 1352.107 kb on - strandat 1352.113 kb on + strandat 1352.114 kb on - strandat 1352.114 kb on - strandat 1352.124 kb on + strandat 1352.125 kb on - strandat 1352.164 kb on + strand, within Echvi_1175at 1352.165 kb on - strand, within Echvi_1175at 1352.180 kb on - strand, within Echvi_1175at 1352.208 kb on + strand, within Echvi_1175at 1352.209 kb on - strand, within Echvi_1175at 1352.218 kb on + strand, within Echvi_1175at 1352.218 kb on + strand, within Echvi_1175at 1352.219 kb on - strand, within Echvi_1175at 1352.219 kb on - strand, within Echvi_1175at 1352.219 kb on - strand, within Echvi_1175at 1352.219 kb on - strand, within Echvi_1175at 1352.245 kb on + strand, within Echvi_1175at 1352.245 kb on + strand, within Echvi_1175at 1352.245 kb on + strand, within Echvi_1175at 1352.246 kb on - strand, within Echvi_1175at 1352.465 kb on + strand, within Echvi_1175at 1352.466 kb on - strand, within Echvi_1175at 1352.575 kb on + strand, within Echvi_1175at 1352.636 kb on + strand, within Echvi_1175at 1352.636 kb on + strand, within Echvi_1175at 1352.636 kb on + strand, within Echvi_1175at 1352.636 kb on + strand, within Echvi_1175at 1352.636 kb on + strand, within Echvi_1175at 1352.636 kb on + strand, within Echvi_1175at 1352.636 kb on + strandat 1352.636 kb on + strand, within Echvi_1175at 1352.636 kb on + strand, within Echvi_1175at 1352.637 kb on - strand, within Echvi_1175at 1352.637 kb on - strand, within Echvi_1175at 1352.637 kb on - strand, within Echvi_1175at 1352.637 kb on - strand, within Echvi_1175at 1352.637 kb on - strand, within Echvi_1175at 1352.637 kb on - strand, within Echvi_1175at 1352.637 kb on - strand, within Echvi_1175at 1352.637 kb on - strand, within Echvi_1175at 1352.637 kb on - strand, within Echvi_1175at 1352.693 kb on + strand, within Echvi_1175at 1352.693 kb on + strand, within Echvi_1175at 1352.775 kb on + strand, within Echvi_1175at 1352.775 kb on + strand, within Echvi_1175at 1352.776 kb on - strand, within Echvi_1175at 1352.776 kb on - strand, within Echvi_1175at 1352.793 kb on + strand, within Echvi_1175at 1352.793 kb on + strand, within Echvi_1175at 1352.798 kb on + strand, within Echvi_1175at 1352.799 kb on - strand, within Echvi_1175at 1352.799 kb on - strand, within Echvi_1175at 1352.802 kb on + strand, within Echvi_1175at 1352.802 kb on + strand, within Echvi_1175at 1352.880 kb on + strand, within Echvi_1175at 1352.881 kb on - strand, within Echvi_1175at 1352.881 kb on - strand, within Echvi_1175at 1352.881 kb on - strand, within Echvi_1175at 1352.881 kb on - strand, within Echvi_1175at 1352.882 kb on + strand, within Echvi_1175at 1352.882 kb on + strand, within Echvi_1175at 1352.883 kb on - strand, within Echvi_1175at 1352.883 kb on - strand, within Echvi_1175at 1352.895 kb on - strand, within Echvi_1175at 1352.941 kb on + strand, within Echvi_1175at 1352.942 kb on - strand, within Echvi_1175at 1353.008 kb on - strand, within Echvi_1175at 1353.015 kb on - strand, within Echvi_1175at 1353.053 kb on + strand, within Echvi_1175at 1353.053 kb on + strand, within Echvi_1175at 1353.053 kb on + strand, within Echvi_1175at 1353.053 kb on + strand, within Echvi_1175at 1353.053 kb on + strand, within Echvi_1175at 1353.054 kb on - strand, within Echvi_1175at 1353.054 kb on - strand, within Echvi_1175at 1353.054 kb on - strand, within Echvi_1175at 1353.056 kb on + strand, within Echvi_1175at 1353.124 kb on + strand, within Echvi_1175at 1353.124 kb on + strand, within Echvi_1175at 1353.125 kb on - strand, within Echvi_1175at 1353.125 kb on - strand, within Echvi_1175at 1353.125 kb on - strand, within Echvi_1175at 1353.188 kb on - strand, within Echvi_1175at 1353.196 kb on + strand, within Echvi_1175at 1353.196 kb on + strand, within Echvi_1175at 1353.196 kb on + strand, within Echvi_1175at 1353.197 kb on - strand, within Echvi_1175at 1353.202 kb on - strand, within Echvi_1175at 1353.286 kb on - strand, within Echvi_1175at 1353.409 kb on - strand, within Echvi_1175at 1353.423 kb on - strand, within Echvi_1175at 1353.423 kb on - strand, within Echvi_1175at 1353.423 kb on - strand, within Echvi_1175at 1353.423 kb on - strand, within Echvi_1175at 1353.465 kb on + strand, within Echvi_1175at 1353.467 kb on + strand, within Echvi_1175at 1353.498 kb on - strand, within Echvi_1175at 1353.498 kb on - strand, within Echvi_1175at 1353.498 kb on - strand, within Echvi_1175at 1353.512 kb on + strand, within Echvi_1175at 1353.513 kb on - strand, within Echvi_1175at 1353.513 kb on - strand, within Echvi_1175at 1353.513 kb on - strand, within Echvi_1175at 1353.513 kb on - strand, within Echvi_1175at 1353.513 kb on - strand, within Echvi_1175at 1353.527 kb on + strand, within Echvi_1175at 1353.527 kb on + strand, within Echvi_1175at 1353.527 kb on + strand, within Echvi_1175at 1353.527 kb on + strand, within Echvi_1175at 1353.528 kb on - strand, within Echvi_1175at 1353.528 kb on - strand, within Echvi_1175at 1353.528 kb on - strand, within Echvi_1175at 1353.547 kb on + strand, within Echvi_1175at 1353.561 kb on + strand, within Echvi_1175at 1353.615 kb on + strandat 1353.637 kb on + strandat 1353.638 kb on - strandat 1353.679 kb on - strandat 1353.685 kb on + strandat 1353.686 kb on - strandat 1353.686 kb on - strandat 1353.699 kb on + strandat 1353.706 kb on + strandat 1353.706 kb on + strandat 1353.706 kb on + strandat 1353.706 kb on + strandat 1353.706 kb on + strandat 1353.706 kb on + strandat 1353.707 kb on - strandat 1353.707 kb on - strandat 1353.707 kb on - strandat 1353.707 kb on - strandat 1353.708 kb on + strandat 1353.708 kb on + strandat 1353.708 kb on + strandat 1353.709 kb on - strandat 1353.709 kb on - strandat 1353.714 kb on + strandat 1353.715 kb on - strandat 1353.739 kb on + strandat 1353.798 kb on - strandat 1353.802 kb on + strandat 1353.803 kb on - strandat 1353.865 kb on - strandat 1353.871 kb on - strandat 1353.873 kb on - strandat 1353.979 kb on + strand, within Echvi_1176at 1353.979 kb on + strand, within Echvi_1176at 1353.991 kb on + strand, within Echvi_1176at 1353.991 kb on + strand, within Echvi_1176at 1353.992 kb on - strand, within Echvi_1176at 1354.035 kb on - strand, within Echvi_1176at 1354.035 kb on - strand, within Echvi_1176at 1354.035 kb on - strand, within Echvi_1176at 1354.037 kb on + strand, within Echvi_1176at 1354.054 kb on + strand, within Echvi_1176at 1354.071 kb on + strand, within Echvi_1176at 1354.071 kb on + strand, within Echvi_1176at 1354.072 kb on - strand, within Echvi_1176at 1354.072 kb on - strand, within Echvi_1176at 1354.110 kb on + strand, within Echvi_1176at 1354.110 kb on + strand, within Echvi_1176at 1354.110 kb on + strand, within Echvi_1176at 1354.110 kb on + strand, within Echvi_1176at 1354.110 kb on + strand, within Echvi_1176at 1354.110 kb on + strand, within Echvi_1176at 1354.111 kb on - strand, within Echvi_1176at 1354.111 kb on - strand, within Echvi_1176at 1354.111 kb on - strand, within Echvi_1176at 1354.113 kb on - strand, within Echvi_1176at 1354.113 kb on - strand, within Echvi_1176at 1354.367 kb on - strand, within Echvi_1176at 1354.371 kb on - strand, within Echvi_1176at 1354.402 kb on - strand, within Echvi_1176at 1354.402 kb on - strand, within Echvi_1176at 1354.402 kb on - strand, within Echvi_1176at 1354.467 kb on + strand, within Echvi_1176at 1354.554 kb on + strand, within Echvi_1176at 1354.554 kb on + strand, within Echvi_1176at 1354.554 kb on + strand, within Echvi_1176at 1354.555 kb on - strand, within Echvi_1176at 1354.555 kb on - strand, within Echvi_1176at 1354.555 kb on - strand, within Echvi_1176at 1354.555 kb on - strand, within Echvi_1176at 1354.555 kb on - strand, within Echvi_1176at 1354.614 kb on + strandat 1354.615 kb on - strandat 1354.615 kb on - strandat 1354.615 kb on - strandat 1354.653 kb on + strandat 1354.653 kb on + strandat 1354.685 kb on + strandat 1354.686 kb on - strandat 1354.686 kb on - strandat 1354.686 kb on - strandat 1354.701 kb on - strandat 1354.728 kb on + strandat 1354.729 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (N)
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1,350,983 + +0.6
1,350,989 + +0.1
1,351,000 - +0.0
1,351,002 + -0.7
1,351,167 + -0.8
1,351,181 - -0.2
1,351,189 + +1.7
1,351,189 + -0.6
1,351,189 + -0.4
1,351,190 - -1.4
1,351,234 + +0.2
1,351,235 - +0.9
1,351,235 - -0.9
1,351,261 + +1.2
1,351,262 - -0.2
1,351,301 + -0.7
1,351,302 - +0.8
1,351,302 - -0.3
1,351,319 - +0.1
1,351,319 - +0.2
1,351,319 - +0.8
1,351,319 - -0.1
1,351,324 - -0.3
1,351,324 - -0.0
1,351,344 - -1.6
1,351,427 - +0.8
1,351,450 + +0.7
1,351,451 - +0.9
1,351,451 - -0.2
1,351,451 - +1.1
1,351,480 + -0.2
1,351,480 + +0.5
1,351,481 - -0.5
1,351,488 + -0.1
1,351,488 + -0.5
1,351,524 + -0.4
1,351,525 - -1.1
1,351,525 - -1.3
1,351,526 + -0.9
1,351,526 + +1.5
1,351,527 - -0.2
1,351,608 + +0.3
1,351,970 - +0.2
1,351,977 + -1.1
1,351,983 - -0.5
1,352,003 - -0.2
1,352,054 + -1.8
1,352,054 + -0.8
1,352,054 + -2.8
1,352,058 + +0.3
1,352,058 + -1.6
1,352,059 - -2.4
1,352,107 - -2.1
1,352,113 + +1.2
1,352,114 - -1.1
1,352,114 - -1.4
1,352,124 + -1.0
1,352,125 - -2.5
1,352,164 + Echvi_1175 0.10 +0.1
1,352,165 - Echvi_1175 0.10 -1.1
1,352,180 - Echvi_1175 0.11 -1.6
1,352,208 + Echvi_1175 0.13 -2.6
1,352,209 - Echvi_1175 0.13 -0.1
1,352,218 + Echvi_1175 0.13 -1.7
1,352,218 + Echvi_1175 0.13 -0.1
1,352,219 - Echvi_1175 0.13 -1.1
1,352,219 - Echvi_1175 0.13 -1.7
1,352,219 - Echvi_1175 0.13 +0.2
1,352,219 - Echvi_1175 0.13 -0.9
1,352,245 + Echvi_1175 0.15 -0.1
1,352,245 + Echvi_1175 0.15 -0.6
1,352,245 + Echvi_1175 0.15 -0.6
1,352,246 - Echvi_1175 0.15 -1.0
1,352,465 + Echvi_1175 0.27 -0.8
1,352,466 - Echvi_1175 0.27 -0.5
1,352,575 + Echvi_1175 0.33 -1.7
1,352,636 + Echvi_1175 0.37 -3.0
1,352,636 + Echvi_1175 0.37 -2.2
1,352,636 + Echvi_1175 0.37 -0.5
1,352,636 + Echvi_1175 0.37 -2.7
1,352,636 + Echvi_1175 0.37 -1.1
1,352,636 + Echvi_1175 0.37 -2.2
1,352,636 + +2.2
1,352,636 + Echvi_1175 0.37 -0.8
1,352,636 + Echvi_1175 0.37 -2.0
1,352,637 - Echvi_1175 0.37 -2.0
1,352,637 - Echvi_1175 0.37 -2.3
1,352,637 - Echvi_1175 0.37 -0.1
1,352,637 - Echvi_1175 0.37 +0.3
1,352,637 - Echvi_1175 0.37 -0.9
1,352,637 - Echvi_1175 0.37 +0.9
1,352,637 - Echvi_1175 0.37 -2.2
1,352,637 - Echvi_1175 0.37 -2.7
1,352,637 - Echvi_1175 0.37 -2.0
1,352,693 + Echvi_1175 0.40 -0.6
1,352,693 + Echvi_1175 0.40 -0.9
1,352,775 + Echvi_1175 0.45 -0.1
1,352,775 + Echvi_1175 0.45 -0.6
1,352,776 - Echvi_1175 0.45 -2.0
1,352,776 - Echvi_1175 0.45 -3.6
1,352,793 + Echvi_1175 0.46 -0.3
1,352,793 + Echvi_1175 0.46 -1.3
1,352,798 + Echvi_1175 0.46 -3.1
1,352,799 - Echvi_1175 0.46 -1.3
1,352,799 - Echvi_1175 0.46 -0.4
1,352,802 + Echvi_1175 0.46 -0.9
1,352,802 + Echvi_1175 0.46 -0.3
1,352,880 + Echvi_1175 0.51 +0.6
1,352,881 - Echvi_1175 0.51 +0.2
1,352,881 - Echvi_1175 0.51 -1.7
1,352,881 - Echvi_1175 0.51 -0.9
1,352,881 - Echvi_1175 0.51 +0.2
1,352,882 + Echvi_1175 0.51 -1.4
1,352,882 + Echvi_1175 0.51 -0.8
1,352,883 - Echvi_1175 0.51 -0.4
1,352,883 - Echvi_1175 0.51 -1.8
1,352,895 - Echvi_1175 0.51 +0.9
1,352,941 + Echvi_1175 0.54 -1.5
1,352,942 - Echvi_1175 0.54 -1.1
1,353,008 - Echvi_1175 0.58 -0.5
1,353,015 - Echvi_1175 0.58 +0.6
1,353,053 + Echvi_1175 0.60 -2.4
1,353,053 + Echvi_1175 0.60 -0.4
1,353,053 + Echvi_1175 0.60 -1.2
1,353,053 + Echvi_1175 0.60 -1.6
1,353,053 + Echvi_1175 0.60 +0.2
1,353,054 - Echvi_1175 0.60 -1.3
1,353,054 - Echvi_1175 0.60 -2.0
1,353,054 - Echvi_1175 0.60 -1.9
1,353,056 + Echvi_1175 0.61 -0.4
1,353,124 + Echvi_1175 0.64 +0.9
1,353,124 + Echvi_1175 0.64 -2.0
1,353,125 - Echvi_1175 0.64 -2.1
1,353,125 - Echvi_1175 0.64 -2.5
1,353,125 - Echvi_1175 0.64 -1.4
1,353,188 - Echvi_1175 0.68 -1.0
1,353,196 + Echvi_1175 0.68 -0.6
1,353,196 + Echvi_1175 0.68 -0.4
1,353,196 + Echvi_1175 0.68 -1.7
1,353,197 - Echvi_1175 0.68 -3.0
1,353,202 - Echvi_1175 0.69 +1.9
1,353,286 - Echvi_1175 0.73 -0.9
1,353,409 - Echvi_1175 0.80 -3.1
1,353,423 - Echvi_1175 0.81 -0.8
1,353,423 - Echvi_1175 0.81 +1.0
1,353,423 - Echvi_1175 0.81 +0.3
1,353,423 - Echvi_1175 0.81 -1.9
1,353,465 + Echvi_1175 0.84 -1.0
1,353,467 + Echvi_1175 0.84 -2.4
1,353,498 - Echvi_1175 0.85 -1.2
1,353,498 - Echvi_1175 0.85 +2.5
1,353,498 - Echvi_1175 0.85 -2.6
1,353,512 + Echvi_1175 0.86 -1.9
1,353,513 - Echvi_1175 0.86 -1.6
1,353,513 - Echvi_1175 0.86 +1.2
1,353,513 - Echvi_1175 0.86 -0.3
1,353,513 - Echvi_1175 0.86 -0.9
1,353,513 - Echvi_1175 0.86 -0.1
1,353,527 + Echvi_1175 0.87 -2.1
1,353,527 + Echvi_1175 0.87 -0.7
1,353,527 + Echvi_1175 0.87 -0.1
1,353,527 + Echvi_1175 0.87 -1.5
1,353,528 - Echvi_1175 0.87 -1.6
1,353,528 - Echvi_1175 0.87 -1.4
1,353,528 - Echvi_1175 0.87 +0.3
1,353,547 + Echvi_1175 0.88 -2.5
1,353,561 + Echvi_1175 0.89 -0.9
1,353,615 + -1.0
1,353,637 + +1.2
1,353,638 - -1.6
1,353,679 - +0.5
1,353,685 + -1.1
1,353,686 - -0.9
1,353,686 - -1.2
1,353,699 + -0.7
1,353,706 + -1.2
1,353,706 + +0.3
1,353,706 + -1.1
1,353,706 + -3.4
1,353,706 + -2.0
1,353,706 + +0.5
1,353,707 - -1.4
1,353,707 - -0.1
1,353,707 - -0.7
1,353,707 - -1.3
1,353,708 + +0.1
1,353,708 + -0.4
1,353,708 + -1.6
1,353,709 - -0.1
1,353,709 - -1.7
1,353,714 + -1.0
1,353,715 - -2.4
1,353,739 + -0.6
1,353,798 - +0.6
1,353,802 + -0.9
1,353,803 - -0.9
1,353,865 - -0.3
1,353,871 - -0.4
1,353,873 - -0.4
1,353,979 + Echvi_1176 0.12 -0.2
1,353,979 + Echvi_1176 0.12 +0.5
1,353,991 + Echvi_1176 0.13 -0.5
1,353,991 + Echvi_1176 0.13 +2.2
1,353,992 - Echvi_1176 0.13 -0.1
1,354,035 - Echvi_1176 0.19 -1.3
1,354,035 - Echvi_1176 0.19 +1.2
1,354,035 - Echvi_1176 0.19 +0.1
1,354,037 + Echvi_1176 0.19 -1.5
1,354,054 + Echvi_1176 0.21 +0.2
1,354,071 + Echvi_1176 0.23 -0.4
1,354,071 + Echvi_1176 0.23 +0.9
1,354,072 - Echvi_1176 0.23 -1.3
1,354,072 - Echvi_1176 0.23 +0.5
1,354,110 + Echvi_1176 0.28 -0.1
1,354,110 + Echvi_1176 0.28 +1.8
1,354,110 + Echvi_1176 0.28 -0.1
1,354,110 + Echvi_1176 0.28 -0.7
1,354,110 + Echvi_1176 0.28 +0.5
1,354,110 + Echvi_1176 0.28 -0.2
1,354,111 - Echvi_1176 0.28 -0.7
1,354,111 - Echvi_1176 0.28 +1.3
1,354,111 - Echvi_1176 0.28 +0.8
1,354,113 - Echvi_1176 0.28 +0.3
1,354,113 - Echvi_1176 0.28 -0.6
1,354,367 - Echvi_1176 0.60 +0.1
1,354,371 - Echvi_1176 0.61 -1.1
1,354,402 - Echvi_1176 0.65 +1.6
1,354,402 - Echvi_1176 0.65 -0.5
1,354,402 - Echvi_1176 0.65 +2.5
1,354,467 + Echvi_1176 0.73 +0.2
1,354,554 + Echvi_1176 0.84 +1.1
1,354,554 + Echvi_1176 0.84 -0.1
1,354,554 + Echvi_1176 0.84 -0.3
1,354,555 - Echvi_1176 0.84 +1.5
1,354,555 - Echvi_1176 0.84 -0.0
1,354,555 - Echvi_1176 0.84 -1.4
1,354,555 - Echvi_1176 0.84 +0.2
1,354,555 - Echvi_1176 0.84 +0.0
1,354,614 + -0.4
1,354,615 - -1.3
1,354,615 - +1.3
1,354,615 - +0.0
1,354,653 + +0.3
1,354,653 + +0.6
1,354,685 + +0.0
1,354,686 - +0.4
1,354,686 - -0.4
1,354,686 - -2.0
1,354,701 - +0.4
1,354,728 + +0.5
1,354,729 - -0.1

Or see this region's nucleotide sequence