Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0367 and Echvi_0368 are separated by 61 nucleotides Echvi_0368 and Echvi_0369 are separated by 79 nucleotides
Echvi_0367: Echvi_0367 - hypothetical protein, at 395,055 to 395,969
_0367
Echvi_0368: Echvi_0368 - hypothetical protein, at 396,031 to 396,132
_0368
Echvi_0369: Echvi_0369 - ATPases with chaperone activity, ATP-binding subunit, at 396,212 to 398,740
_0369
Position (kb) 396
397 Strain fitness (log2 ratio) -2
-1
0
1
2 at 395.065 kb on + strand at 395.069 kb on - strand at 395.108 kb on + strand at 395.173 kb on + strand, within Echvi_0367 at 395.174 kb on - strand, within Echvi_0367 at 395.242 kb on + strand, within Echvi_0367 at 395.267 kb on + strand, within Echvi_0367 at 395.292 kb on - strand, within Echvi_0367 at 395.328 kb on + strand, within Echvi_0367 at 395.338 kb on - strand, within Echvi_0367 at 395.359 kb on - strand, within Echvi_0367 at 395.381 kb on - strand, within Echvi_0367 at 395.388 kb on - strand, within Echvi_0367 at 395.406 kb on - strand, within Echvi_0367 at 395.414 kb on + strand, within Echvi_0367 at 395.415 kb on - strand, within Echvi_0367 at 395.416 kb on + strand, within Echvi_0367 at 395.417 kb on - strand, within Echvi_0367 at 395.417 kb on - strand, within Echvi_0367 at 395.417 kb on - strand, within Echvi_0367 at 395.417 kb on - strand, within Echvi_0367 at 395.417 kb on - strand, within Echvi_0367 at 395.417 kb on - strand, within Echvi_0367 at 395.502 kb on + strand at 395.563 kb on + strand, within Echvi_0367 at 395.576 kb on + strand, within Echvi_0367 at 395.596 kb on + strand, within Echvi_0367 at 395.596 kb on + strand, within Echvi_0367 at 395.596 kb on + strand, within Echvi_0367 at 395.596 kb on + strand, within Echvi_0367 at 395.596 kb on + strand, within Echvi_0367 at 395.597 kb on - strand, within Echvi_0367 at 395.597 kb on - strand, within Echvi_0367 at 395.602 kb on + strand, within Echvi_0367 at 395.640 kb on - strand, within Echvi_0367 at 395.659 kb on + strand, within Echvi_0367 at 395.659 kb on + strand, within Echvi_0367 at 395.660 kb on - strand, within Echvi_0367 at 395.660 kb on - strand, within Echvi_0367 at 395.712 kb on - strand, within Echvi_0367 at 395.713 kb on + strand, within Echvi_0367 at 395.713 kb on + strand, within Echvi_0367 at 395.713 kb on + strand, within Echvi_0367 at 395.714 kb on - strand, within Echvi_0367 at 395.750 kb on - strand, within Echvi_0367 at 395.759 kb on + strand, within Echvi_0367 at 395.759 kb on + strand, within Echvi_0367 at 395.760 kb on - strand, within Echvi_0367 at 395.891 kb on - strand at 395.891 kb on - strand at 395.892 kb on + strand at 395.893 kb on - strand at 395.912 kb on - strand at 395.936 kb on + strand at 395.948 kb on + strand at 396.015 kb on + strand at 396.027 kb on + strand at 396.032 kb on + strand at 396.032 kb on + strand at 396.032 kb on + strand at 396.053 kb on + strand, within Echvi_0368 at 396.053 kb on + strand, within Echvi_0368 at 396.053 kb on + strand, within Echvi_0368 at 396.090 kb on + strand, within Echvi_0368 at 396.091 kb on - strand, within Echvi_0368 at 396.094 kb on - strand, within Echvi_0368 at 396.094 kb on - strand, within Echvi_0368 at 396.094 kb on - strand, within Echvi_0368 at 396.203 kb on + strand at 396.204 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 395,065 + +1.5 395,069 - -0.0 395,108 + +0.3 395,173 + Echvi_0367 0.13 -0.4 395,174 - Echvi_0367 0.13 -0.9 395,242 + Echvi_0367 0.20 +0.3 395,267 + Echvi_0367 0.23 -0.6 395,292 - Echvi_0367 0.26 +1.1 395,328 + Echvi_0367 0.30 -1.8 395,338 - Echvi_0367 0.31 -1.7 395,359 - Echvi_0367 0.33 -0.9 395,381 - Echvi_0367 0.36 -0.1 395,388 - Echvi_0367 0.36 +0.1 395,406 - Echvi_0367 0.38 +0.3 395,414 + Echvi_0367 0.39 -0.9 395,415 - Echvi_0367 0.39 +0.3 395,416 + Echvi_0367 0.39 +0.4 395,417 - Echvi_0367 0.40 +0.4 395,417 - Echvi_0367 0.40 +0.1 395,417 - Echvi_0367 0.40 +0.5 395,417 - Echvi_0367 0.40 -0.3 395,417 - Echvi_0367 0.40 +0.8 395,417 - Echvi_0367 0.40 -0.7 395,502 + +1.1 395,563 + Echvi_0367 0.56 -0.8 395,576 + Echvi_0367 0.57 -1.3 395,596 + Echvi_0367 0.59 -1.2 395,596 + Echvi_0367 0.59 +0.2 395,596 + Echvi_0367 0.59 +0.3 395,596 + Echvi_0367 0.59 +0.5 395,596 + Echvi_0367 0.59 -0.3 395,597 - Echvi_0367 0.59 -0.0 395,597 - Echvi_0367 0.59 +0.1 395,602 + Echvi_0367 0.60 +0.4 395,640 - Echvi_0367 0.64 +0.8 395,659 + Echvi_0367 0.66 +1.1 395,659 + Echvi_0367 0.66 +0.8 395,660 - Echvi_0367 0.66 +0.6 395,660 - Echvi_0367 0.66 -0.3 395,712 - Echvi_0367 0.72 +0.7 395,713 + Echvi_0367 0.72 -0.4 395,713 + Echvi_0367 0.72 +0.6 395,713 + Echvi_0367 0.72 -0.0 395,714 - Echvi_0367 0.72 -0.7 395,750 - Echvi_0367 0.76 +0.1 395,759 + Echvi_0367 0.77 -0.3 395,759 + Echvi_0367 0.77 -0.7 395,760 - Echvi_0367 0.77 +1.2 395,891 - +0.1 395,891 - +0.5 395,892 + -2.0 395,893 - -0.3 395,912 - -1.2 395,936 + -0.2 395,948 + -1.7 396,015 + -0.8 396,027 + +0.2 396,032 + +0.1 396,032 + -0.5 396,032 + +0.9 396,053 + Echvi_0368 0.22 +0.3 396,053 + Echvi_0368 0.22 -1.0 396,053 + Echvi_0368 0.22 +2.1 396,090 + Echvi_0368 0.58 -1.6 396,091 - Echvi_0368 0.59 -2.4 396,094 - Echvi_0368 0.62 -0.4 396,094 - Echvi_0368 0.62 +0.9 396,094 - Echvi_0368 0.62 -0.1 396,203 + -0.1 396,204 - +1.1
Or see this region's nucleotide sequence