Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_21610

Experiment: m.b. benzoic 0.58 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_21605 and CA264_21610 are separated by 16 nucleotidesCA264_21610 and CA264_21615 are separated by 98 nucleotidesCA264_21615 and CA264_21620 are separated by 3 nucleotides CA264_21605: CA264_21605 - hypothetical protein, at 189,241 to 190,242 _21605 CA264_21610: CA264_21610 - hypothetical protein, at 190,259 to 190,885 _21610 CA264_21615: CA264_21615 - hypothetical protein, at 190,984 to 191,340 _21615 CA264_21620: CA264_21620 - hypothetical protein, at 191,344 to 192,588 _21620 Position (kb) 190 191Strain fitness (log2 ratio) -2 -1 0 1 2 3at 189.418 kb on + strand, within CA264_21605at 189.418 kb on + strand, within CA264_21605at 189.419 kb on - strand, within CA264_21605at 189.419 kb on - strand, within CA264_21605at 189.563 kb on - strand, within CA264_21605at 189.563 kb on - strand, within CA264_21605at 189.604 kb on + strand, within CA264_21605at 189.605 kb on - strand, within CA264_21605at 189.689 kb on - strand, within CA264_21605at 189.689 kb on - strand, within CA264_21605at 189.689 kb on - strand, within CA264_21605at 189.773 kb on + strand, within CA264_21605at 189.776 kb on + strand, within CA264_21605at 189.777 kb on - strand, within CA264_21605at 189.875 kb on - strand, within CA264_21605at 189.875 kb on - strand, within CA264_21605at 189.918 kb on + strand, within CA264_21605at 189.919 kb on - strand, within CA264_21605at 189.922 kb on - strand, within CA264_21605at 189.931 kb on - strand, within CA264_21605at 189.956 kb on + strand, within CA264_21605at 189.956 kb on + strand, within CA264_21605at 189.957 kb on - strand, within CA264_21605at 190.007 kb on + strand, within CA264_21605at 190.011 kb on + strand, within CA264_21605at 190.011 kb on + strand, within CA264_21605at 190.011 kb on + strand, within CA264_21605at 190.012 kb on - strand, within CA264_21605at 190.012 kb on - strand, within CA264_21605at 190.012 kb on - strand, within CA264_21605at 190.012 kb on - strand, within CA264_21605at 190.012 kb on - strand, within CA264_21605at 190.040 kb on + strand, within CA264_21605at 190.144 kb on - strandat 190.166 kb on + strandat 190.166 kb on + strandat 190.189 kb on - strandat 190.229 kb on + strandat 190.229 kb on + strandat 190.231 kb on + strandat 190.231 kb on + strandat 190.232 kb on - strandat 190.232 kb on - strandat 190.232 kb on - strandat 190.241 kb on - strandat 190.388 kb on + strand, within CA264_21610at 190.388 kb on + strand, within CA264_21610at 190.388 kb on + strand, within CA264_21610at 190.388 kb on + strand, within CA264_21610at 190.388 kb on + strand, within CA264_21610at 190.446 kb on - strand, within CA264_21610at 190.446 kb on - strand, within CA264_21610at 190.500 kb on + strand, within CA264_21610at 190.586 kb on + strand, within CA264_21610at 190.621 kb on + strand, within CA264_21610at 190.622 kb on - strand, within CA264_21610at 190.762 kb on + strand, within CA264_21610at 190.880 kb on + strandat 190.881 kb on - strandat 190.881 kb on - strandat 190.881 kb on - strandat 190.895 kb on + strandat 190.921 kb on + strandat 190.941 kb on - strandat 190.942 kb on + strandat 190.945 kb on + strandat 190.952 kb on + strandat 190.953 kb on - strandat 190.953 kb on - strandat 190.953 kb on - strandat 190.970 kb on - strandat 190.970 kb on - strandat 190.993 kb on - strandat 191.236 kb on + strand, within CA264_21615at 191.237 kb on - strand, within CA264_21615at 191.237 kb on - strand, within CA264_21615at 191.237 kb on - strand, within CA264_21615at 191.259 kb on + strand, within CA264_21615at 191.259 kb on + strand, within CA264_21615at 191.260 kb on - strand, within CA264_21615at 191.381 kb on - strandat 191.384 kb on + strandat 191.450 kb on - strandat 191.575 kb on + strand, within CA264_21620at 191.662 kb on - strand, within CA264_21620at 191.662 kb on - strand, within CA264_21620at 191.683 kb on + strand, within CA264_21620at 191.795 kb on - strand, within CA264_21620at 191.813 kb on + strand, within CA264_21620at 191.814 kb on - strand, within CA264_21620at 191.814 kb on - strand, within CA264_21620at 191.870 kb on + strand, within CA264_21620at 191.870 kb on + strand, within CA264_21620at 191.874 kb on + strand, within CA264_21620

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml
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189,418 + CA264_21605 0.18 -0.6
189,418 + CA264_21605 0.18 +1.0
189,419 - CA264_21605 0.18 +0.3
189,419 - CA264_21605 0.18 +0.1
189,563 - CA264_21605 0.32 -1.0
189,563 - CA264_21605 0.32 -0.1
189,604 + CA264_21605 0.36 +0.2
189,605 - CA264_21605 0.36 -0.2
189,689 - CA264_21605 0.45 +1.6
189,689 - CA264_21605 0.45 -0.4
189,689 - CA264_21605 0.45 -1.8
189,773 + CA264_21605 0.53 +0.0
189,776 + CA264_21605 0.53 -1.6
189,777 - CA264_21605 0.53 -0.3
189,875 - CA264_21605 0.63 +0.2
189,875 - CA264_21605 0.63 +0.3
189,918 + CA264_21605 0.68 +0.1
189,919 - CA264_21605 0.68 +0.2
189,922 - CA264_21605 0.68 -1.0
189,931 - CA264_21605 0.69 +0.2
189,956 + CA264_21605 0.71 +0.1
189,956 + CA264_21605 0.71 -0.2
189,957 - CA264_21605 0.71 -0.1
190,007 + CA264_21605 0.76 +1.2
190,011 + CA264_21605 0.77 +0.7
190,011 + CA264_21605 0.77 -0.3
190,011 + CA264_21605 0.77 +0.6
190,012 - CA264_21605 0.77 +0.3
190,012 - CA264_21605 0.77 +0.4
190,012 - CA264_21605 0.77 -0.6
190,012 - CA264_21605 0.77 -0.6
190,012 - CA264_21605 0.77 +1.8
190,040 + CA264_21605 0.80 -0.2
190,144 - +0.3
190,166 + -0.0
190,166 + -0.2
190,189 - +0.2
190,229 + +0.1
190,229 + +1.0
190,231 + +0.3
190,231 + -0.0
190,232 - +0.5
190,232 - -0.2
190,232 - +0.6
190,241 - -0.2
190,388 + CA264_21610 0.21 -0.6
190,388 + CA264_21610 0.21 -0.4
190,388 + CA264_21610 0.21 +1.5
190,388 + CA264_21610 0.21 +1.1
190,388 + CA264_21610 0.21 +0.4
190,446 - CA264_21610 0.30 +1.9
190,446 - CA264_21610 0.30 -0.4
190,500 + CA264_21610 0.38 -0.2
190,586 + CA264_21610 0.52 +0.4
190,621 + CA264_21610 0.58 +0.7
190,622 - CA264_21610 0.58 +0.1
190,762 + CA264_21610 0.80 +0.1
190,880 + +0.6
190,881 - -0.7
190,881 - -1.1
190,881 - +3.0
190,895 + +0.1
190,921 + +0.2
190,941 - -1.3
190,942 + -0.9
190,945 + +0.2
190,952 + +1.1
190,953 - -0.6
190,953 - -0.2
190,953 - +0.3
190,970 - +1.1
190,970 - +0.1
190,993 - -1.2
191,236 + CA264_21615 0.71 +0.4
191,237 - CA264_21615 0.71 +0.2
191,237 - CA264_21615 0.71 -0.2
191,237 - CA264_21615 0.71 -0.4
191,259 + CA264_21615 0.77 +0.1
191,259 + CA264_21615 0.77 -0.6
191,260 - CA264_21615 0.77 -0.2
191,381 - -0.2
191,384 + +0.4
191,450 - +0.3
191,575 + CA264_21620 0.19 -0.3
191,662 - CA264_21620 0.26 -1.7
191,662 - CA264_21620 0.26 +0.2
191,683 + CA264_21620 0.27 -0.3
191,795 - CA264_21620 0.36 -0.9
191,813 + CA264_21620 0.38 +0.7
191,814 - CA264_21620 0.38 +1.6
191,814 - CA264_21620 0.38 -0.9
191,870 + CA264_21620 0.42 -0.2
191,870 + CA264_21620 0.42 +0.1
191,874 + CA264_21620 0.43 +0.8

Or see this region's nucleotide sequence