Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21430 and CA264_21435 are separated by 259 nucleotides CA264_21435 and CA264_21440 are separated by 153 nucleotides CA264_21440 and CA264_21445 are separated by 21 nucleotides
CA264_21430: CA264_21430 - DDE transposase, at 151,502 to 152,329
_21430
CA264_21435: CA264_21435 - hypothetical protein, at 152,589 to 152,876
_21435
CA264_21440: CA264_21440 - metal transporter, at 153,030 to 154,310
_21440
CA264_21445: CA264_21445 - metal transporter, at 154,332 to 156,236
_21445
Position (kb)
153
154
155 Strain fitness (log2 ratio)
-2
-1
0
1 at 152.094 kb on + strand, within CA264_21430 at 152.144 kb on + strand, within CA264_21430 at 152.144 kb on + strand, within CA264_21430 at 152.150 kb on + strand, within CA264_21430 at 152.151 kb on - strand, within CA264_21430 at 152.151 kb on - strand, within CA264_21430 at 152.184 kb on + strand, within CA264_21430 at 152.188 kb on - strand, within CA264_21430 at 152.341 kb on - strand at 152.341 kb on - strand at 152.341 kb on - strand at 152.373 kb on - strand at 152.377 kb on - strand at 152.377 kb on - strand at 152.394 kb on - strand at 152.399 kb on + strand at 152.425 kb on + strand at 152.441 kb on + strand at 152.441 kb on + strand at 152.447 kb on + strand at 152.526 kb on - strand at 152.526 kb on - strand at 152.526 kb on - strand at 152.637 kb on - strand, within CA264_21435 at 152.693 kb on - strand, within CA264_21435 at 153.115 kb on - strand at 153.310 kb on - strand, within CA264_21440 at 153.456 kb on - strand, within CA264_21440 at 153.619 kb on - strand, within CA264_21440 at 153.765 kb on - strand, within CA264_21440 at 153.940 kb on - strand, within CA264_21440 at 154.011 kb on - strand, within CA264_21440 at 154.185 kb on - strand at 154.341 kb on + strand at 154.428 kb on - strand at 154.428 kb on - strand at 154.545 kb on - strand, within CA264_21445 at 154.637 kb on + strand, within CA264_21445 at 154.638 kb on - strand, within CA264_21445 at 154.923 kb on - strand, within CA264_21445 at 155.224 kb on - strand, within CA264_21445 at 155.308 kb on + strand, within CA264_21445
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 152,094 + CA264_21430 0.71 -0.4 152,144 + CA264_21430 0.78 -2.1 152,144 + CA264_21430 0.78 +0.6 152,150 + CA264_21430 0.78 +0.8 152,151 - CA264_21430 0.78 -1.0 152,151 - CA264_21430 0.78 -0.5 152,184 + CA264_21430 0.82 -0.7 152,188 - CA264_21430 0.83 -2.0 152,341 - +0.4 152,341 - -0.3 152,341 - +0.0 152,373 - +0.4 152,377 - -0.4 152,377 - +0.2 152,394 - -0.5 152,399 + -2.1 152,425 + -1.7 152,441 + -0.5 152,441 + +1.5 152,447 + +0.2 152,526 - +0.1 152,526 - +0.3 152,526 - -0.2 152,637 - CA264_21435 0.17 +0.3 152,693 - CA264_21435 0.36 -0.2 153,115 - -0.2 153,310 - CA264_21440 0.22 +0.5 153,456 - CA264_21440 0.33 +0.1 153,619 - CA264_21440 0.46 -1.4 153,765 - CA264_21440 0.57 -1.1 153,940 - CA264_21440 0.71 -0.3 154,011 - CA264_21440 0.77 +0.9 154,185 - +0.4 154,341 + +0.8 154,428 - +0.7 154,428 - -0.6 154,545 - CA264_21445 0.11 +0.2 154,637 + CA264_21445 0.16 -1.0 154,638 - CA264_21445 0.16 +0.6 154,923 - CA264_21445 0.31 -0.2 155,224 - CA264_21445 0.47 +0.5 155,308 + CA264_21445 0.51 -1.2
Or see this region's nucleotide sequence