Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20260 and CA264_20265 overlap by 26 nucleotides CA264_20265 and CA264_20270 are separated by 141 nucleotides CA264_20270 and CA264_20275 are separated by 213 nucleotides CA264_20275 and CA264_20280 are separated by 86 nucleotides
CA264_20260: CA264_20260 - hypothetical protein, at 4,672,856 to 4,673,812
_20260
CA264_20265: CA264_20265 - hypothetical protein, at 4,673,787 to 4,674,179
_20265
CA264_20270: CA264_20270 - hypothetical protein, at 4,674,321 to 4,675,253
_20270
CA264_20275: CA264_20275 - DNA-binding protein, at 4,675,467 to 4,675,802
_20275
CA264_20280: CA264_20280 - hypothetical protein, at 4,675,889 to 4,676,635
_20280
Position (kb)
4674
4675
4676 Strain fitness (log2 ratio)
-1
0
1 at 4673.376 kb on + strand, within CA264_20260 at 4673.376 kb on + strand, within CA264_20260 at 4673.380 kb on - strand, within CA264_20260 at 4673.461 kb on - strand, within CA264_20260 at 4673.559 kb on + strand, within CA264_20260 at 4673.560 kb on - strand, within CA264_20260 at 4673.713 kb on + strand, within CA264_20260 at 4673.763 kb on + strand at 4673.769 kb on - strand at 4673.824 kb on - strand at 4674.082 kb on - strand, within CA264_20265 at 4674.111 kb on + strand, within CA264_20265 at 4674.157 kb on + strand at 4674.157 kb on + strand at 4674.189 kb on + strand at 4674.297 kb on + strand at 4674.299 kb on + strand at 4674.299 kb on + strand at 4674.379 kb on + strand at 4674.407 kb on - strand at 4674.467 kb on + strand, within CA264_20270 at 4674.495 kb on + strand, within CA264_20270 at 4674.506 kb on + strand, within CA264_20270 at 4674.507 kb on - strand, within CA264_20270 at 4674.558 kb on + strand, within CA264_20270 at 4674.559 kb on - strand, within CA264_20270 at 4674.644 kb on + strand, within CA264_20270 at 4674.645 kb on - strand, within CA264_20270 at 4674.932 kb on + strand, within CA264_20270 at 4674.933 kb on - strand, within CA264_20270 at 4674.933 kb on - strand, within CA264_20270 at 4674.999 kb on + strand, within CA264_20270 at 4675.156 kb on + strand, within CA264_20270 at 4675.156 kb on + strand, within CA264_20270 at 4675.191 kb on + strand at 4675.191 kb on + strand at 4675.191 kb on + strand at 4675.245 kb on + strand at 4675.245 kb on + strand at 4675.246 kb on - strand at 4675.268 kb on + strand at 4675.274 kb on - strand at 4675.326 kb on - strand at 4675.332 kb on + strand at 4675.333 kb on - strand at 4675.346 kb on + strand at 4675.352 kb on - strand at 4675.414 kb on - strand at 4675.416 kb on - strand at 4675.438 kb on - strand at 4675.488 kb on + strand at 4675.488 kb on + strand at 4675.488 kb on + strand at 4675.603 kb on + strand, within CA264_20275 at 4675.633 kb on + strand, within CA264_20275 at 4675.836 kb on - strand at 4675.890 kb on + strand at 4675.902 kb on + strand at 4675.903 kb on - strand at 4675.938 kb on + strand at 4675.939 kb on - strand at 4675.962 kb on - strand at 4676.058 kb on + strand, within CA264_20280 at 4676.058 kb on + strand, within CA264_20280 at 4676.081 kb on + strand, within CA264_20280 at 4676.081 kb on + strand, within CA264_20280 at 4676.177 kb on + strand, within CA264_20280 at 4676.178 kb on - strand, within CA264_20280
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 4,673,376 + CA264_20260 0.54 -0.6 4,673,376 + CA264_20260 0.54 +0.3 4,673,380 - CA264_20260 0.55 -0.2 4,673,461 - CA264_20260 0.63 -0.1 4,673,559 + CA264_20260 0.73 -0.2 4,673,560 - CA264_20260 0.74 -0.8 4,673,713 + CA264_20260 0.90 -0.7 4,673,763 + -0.5 4,673,769 - -0.3 4,673,824 - -0.3 4,674,082 - CA264_20265 0.75 -1.2 4,674,111 + CA264_20265 0.82 -0.4 4,674,157 + +0.3 4,674,157 + -0.0 4,674,189 + -1.3 4,674,297 + +0.2 4,674,299 + +1.2 4,674,299 + -0.5 4,674,379 + +0.6 4,674,407 - -1.4 4,674,467 + CA264_20270 0.16 -0.4 4,674,495 + CA264_20270 0.19 -0.6 4,674,506 + CA264_20270 0.20 -0.4 4,674,507 - CA264_20270 0.20 +0.4 4,674,558 + CA264_20270 0.25 -0.4 4,674,559 - CA264_20270 0.26 -1.1 4,674,644 + CA264_20270 0.35 -0.6 4,674,645 - CA264_20270 0.35 -1.0 4,674,932 + CA264_20270 0.65 -0.4 4,674,933 - CA264_20270 0.66 +1.2 4,674,933 - CA264_20270 0.66 +0.3 4,674,999 + CA264_20270 0.73 +0.1 4,675,156 + CA264_20270 0.89 -0.7 4,675,156 + CA264_20270 0.89 -0.5 4,675,191 + -0.7 4,675,191 + -0.3 4,675,191 + -0.5 4,675,245 + -1.1 4,675,245 + -0.8 4,675,246 - -1.2 4,675,268 + -0.0 4,675,274 - +0.1 4,675,326 - -0.9 4,675,332 + -0.1 4,675,333 - -0.2 4,675,346 + -0.4 4,675,352 - -1.6 4,675,414 - -0.0 4,675,416 - -0.6 4,675,438 - -1.1 4,675,488 + +1.5 4,675,488 + -0.7 4,675,488 + +0.2 4,675,603 + CA264_20275 0.40 -0.2 4,675,633 + CA264_20275 0.49 -0.5 4,675,836 - -0.1 4,675,890 + +0.1 4,675,902 + -0.5 4,675,903 - -0.5 4,675,938 + +0.1 4,675,939 - +0.7 4,675,962 - +0.7 4,676,058 + CA264_20280 0.23 +1.1 4,676,058 + CA264_20280 0.23 +0.9 4,676,081 + CA264_20280 0.26 -0.0 4,676,081 + CA264_20280 0.26 -0.6 4,676,177 + CA264_20280 0.39 +0.3 4,676,178 - CA264_20280 0.39 -0.8
Or see this region's nucleotide sequence