Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_16760

Experiment: m.b. benzoic 0.58 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_16750 and CA264_16755 are separated by 249 nucleotidesCA264_16755 and CA264_16760 are separated by 83 nucleotidesCA264_16760 and CA264_16765 are separated by 208 nucleotides CA264_16750: CA264_16750 - hypothetical protein, at 3,905,374 to 3,906,984 _16750 CA264_16755: CA264_16755 - tRNA-Met, at 3,907,234 to 3,907,309 _16755 CA264_16760: CA264_16760 - hypothetical protein, at 3,907,393 to 3,909,216 _16760 CA264_16765: CA264_16765 - coproporphyrinogen III oxidase, at 3,909,425 to 3,910,552 _16765 Position (kb) 3907 3908 3909 3910Strain fitness (log2 ratio) -2 -1 0 1 2at 3906.420 kb on - strand, within CA264_16750at 3906.430 kb on + strand, within CA264_16750at 3906.434 kb on + strand, within CA264_16750at 3906.434 kb on + strand, within CA264_16750at 3906.434 kb on + strand, within CA264_16750at 3906.434 kb on + strand, within CA264_16750at 3906.435 kb on - strand, within CA264_16750at 3906.435 kb on - strand, within CA264_16750at 3906.435 kb on - strand, within CA264_16750at 3906.439 kb on - strand, within CA264_16750at 3906.442 kb on + strand, within CA264_16750at 3906.453 kb on + strand, within CA264_16750at 3906.484 kb on - strand, within CA264_16750at 3906.510 kb on + strand, within CA264_16750at 3906.533 kb on + strand, within CA264_16750at 3906.534 kb on - strand, within CA264_16750at 3906.546 kb on - strand, within CA264_16750at 3906.556 kb on + strand, within CA264_16750at 3906.600 kb on + strand, within CA264_16750at 3906.601 kb on - strand, within CA264_16750at 3906.601 kb on - strand, within CA264_16750at 3906.682 kb on - strand, within CA264_16750at 3906.682 kb on - strand, within CA264_16750at 3906.714 kb on + strand, within CA264_16750at 3906.714 kb on + strand, within CA264_16750at 3906.715 kb on - strand, within CA264_16750at 3906.716 kb on + strand, within CA264_16750at 3906.716 kb on + strand, within CA264_16750at 3906.716 kb on + strand, within CA264_16750at 3906.716 kb on + strand, within CA264_16750at 3906.716 kb on + strand, within CA264_16750at 3906.716 kb on + strand, within CA264_16750at 3906.717 kb on - strand, within CA264_16750at 3906.717 kb on - strand, within CA264_16750at 3906.720 kb on + strand, within CA264_16750at 3906.721 kb on - strand, within CA264_16750at 3906.723 kb on + strand, within CA264_16750at 3906.778 kb on - strand, within CA264_16750at 3906.786 kb on + strand, within CA264_16750at 3906.819 kb on - strand, within CA264_16750at 3906.826 kb on - strandat 3906.991 kb on + strandat 3906.992 kb on - strandat 3906.996 kb on + strandat 3907.064 kb on - strandat 3907.077 kb on + strandat 3907.078 kb on - strandat 3907.081 kb on + strandat 3907.091 kb on + strandat 3907.093 kb on + strandat 3907.093 kb on + strandat 3907.094 kb on - strandat 3907.112 kb on + strandat 3907.112 kb on + strandat 3907.112 kb on + strandat 3907.112 kb on + strandat 3907.113 kb on - strandat 3907.113 kb on - strandat 3907.123 kb on + strandat 3907.123 kb on + strandat 3907.318 kb on - strandat 3907.402 kb on + strandat 3907.472 kb on + strandat 3907.473 kb on - strandat 3907.571 kb on + strandat 3907.575 kb on - strandat 3907.601 kb on + strand, within CA264_16760at 3907.618 kb on - strand, within CA264_16760at 3907.851 kb on + strand, within CA264_16760at 3907.852 kb on - strand, within CA264_16760at 3907.852 kb on - strand, within CA264_16760at 3907.852 kb on - strand, within CA264_16760at 3907.856 kb on + strand, within CA264_16760at 3907.943 kb on + strand, within CA264_16760at 3907.974 kb on - strand, within CA264_16760at 3907.985 kb on + strand, within CA264_16760at 3907.985 kb on + strand, within CA264_16760at 3907.985 kb on + strand, within CA264_16760at 3907.986 kb on - strand, within CA264_16760at 3908.038 kb on + strand, within CA264_16760at 3908.050 kb on + strand, within CA264_16760at 3908.050 kb on + strand, within CA264_16760at 3908.074 kb on - strand, within CA264_16760at 3908.103 kb on + strand, within CA264_16760at 3908.104 kb on - strand, within CA264_16760at 3908.104 kb on - strand, within CA264_16760at 3908.105 kb on + strand, within CA264_16760at 3908.105 kb on + strand, within CA264_16760at 3908.109 kb on - strand, within CA264_16760at 3908.227 kb on - strand, within CA264_16760at 3908.291 kb on - strand, within CA264_16760at 3908.291 kb on - strand, within CA264_16760at 3908.292 kb on + strand, within CA264_16760at 3908.293 kb on - strand, within CA264_16760at 3908.405 kb on + strand, within CA264_16760at 3908.408 kb on + strand, within CA264_16760at 3908.408 kb on + strand, within CA264_16760at 3908.409 kb on - strand, within CA264_16760at 3908.411 kb on + strand, within CA264_16760at 3908.411 kb on + strand, within CA264_16760at 3908.464 kb on + strand, within CA264_16760at 3908.464 kb on + strand, within CA264_16760at 3908.465 kb on - strand, within CA264_16760at 3908.465 kb on - strand, within CA264_16760at 3908.468 kb on + strand, within CA264_16760at 3908.469 kb on - strand, within CA264_16760at 3908.536 kb on + strand, within CA264_16760at 3908.547 kb on - strand, within CA264_16760at 3908.547 kb on - strand, within CA264_16760at 3908.598 kb on + strand, within CA264_16760at 3908.598 kb on + strand, within CA264_16760at 3908.599 kb on - strand, within CA264_16760at 3908.603 kb on + strand, within CA264_16760at 3908.603 kb on + strand, within CA264_16760at 3908.603 kb on + strand, within CA264_16760at 3908.603 kb on + strand, within CA264_16760at 3908.603 kb on + strand, within CA264_16760at 3908.604 kb on - strand, within CA264_16760at 3908.604 kb on - strand, within CA264_16760at 3908.604 kb on - strand, within CA264_16760at 3908.649 kb on + strand, within CA264_16760at 3908.659 kb on + strand, within CA264_16760at 3908.661 kb on + strand, within CA264_16760at 3908.662 kb on - strand, within CA264_16760at 3908.665 kb on + strand, within CA264_16760at 3908.740 kb on + strand, within CA264_16760at 3908.740 kb on + strand, within CA264_16760at 3908.741 kb on - strand, within CA264_16760at 3908.741 kb on - strand, within CA264_16760at 3908.744 kb on + strand, within CA264_16760at 3908.745 kb on - strand, within CA264_16760at 3908.745 kb on - strand, within CA264_16760at 3908.745 kb on - strand, within CA264_16760at 3908.898 kb on - strand, within CA264_16760at 3908.901 kb on + strand, within CA264_16760at 3908.901 kb on + strand, within CA264_16760at 3908.901 kb on + strand, within CA264_16760at 3908.902 kb on - strand, within CA264_16760at 3908.902 kb on - strand, within CA264_16760at 3908.902 kb on - strand, within CA264_16760at 3908.924 kb on + strand, within CA264_16760at 3908.925 kb on - strand, within CA264_16760at 3908.946 kb on - strand, within CA264_16760at 3909.212 kb on + strandat 3909.233 kb on + strandat 3909.234 kb on - strandat 3909.254 kb on + strandat 3909.254 kb on + strandat 3909.316 kb on + strandat 3909.382 kb on + strandat 3909.382 kb on + strandat 3909.383 kb on - strandat 3909.437 kb on + strandat 3909.590 kb on + strand, within CA264_16765at 3909.640 kb on - strand, within CA264_16765at 3909.669 kb on + strand, within CA264_16765at 3909.874 kb on + strand, within CA264_16765at 3909.875 kb on - strand, within CA264_16765at 3909.884 kb on - strand, within CA264_16765at 3910.043 kb on - strand, within CA264_16765at 3910.121 kb on + strand, within CA264_16765at 3910.194 kb on - strand, within CA264_16765at 3910.194 kb on - strand, within CA264_16765at 3910.194 kb on - strand, within CA264_16765at 3910.194 kb on - strand, within CA264_16765at 3910.203 kb on + strand, within CA264_16765

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml
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3,906,420 - CA264_16750 0.65 -0.5
3,906,430 + CA264_16750 0.66 +1.5
3,906,434 + CA264_16750 0.66 -0.0
3,906,434 + CA264_16750 0.66 +0.4
3,906,434 + CA264_16750 0.66 -0.1
3,906,434 + CA264_16750 0.66 +0.3
3,906,435 - CA264_16750 0.66 -0.9
3,906,435 - CA264_16750 0.66 -0.5
3,906,435 - CA264_16750 0.66 -0.4
3,906,439 - CA264_16750 0.66 -1.7
3,906,442 + CA264_16750 0.66 -1.9
3,906,453 + CA264_16750 0.67 +0.9
3,906,484 - CA264_16750 0.69 +1.5
3,906,510 + CA264_16750 0.71 -1.3
3,906,533 + CA264_16750 0.72 -0.6
3,906,534 - CA264_16750 0.72 -0.1
3,906,546 - CA264_16750 0.73 +1.3
3,906,556 + CA264_16750 0.73 -0.1
3,906,600 + CA264_16750 0.76 +0.4
3,906,601 - CA264_16750 0.76 -0.2
3,906,601 - CA264_16750 0.76 +0.5
3,906,682 - CA264_16750 0.81 -0.1
3,906,682 - CA264_16750 0.81 -0.1
3,906,714 + CA264_16750 0.83 -0.5
3,906,714 + CA264_16750 0.83 -0.8
3,906,715 - CA264_16750 0.83 -1.4
3,906,716 + CA264_16750 0.83 +0.5
3,906,716 + CA264_16750 0.83 -0.5
3,906,716 + CA264_16750 0.83 +0.2
3,906,716 + CA264_16750 0.83 -0.7
3,906,716 + CA264_16750 0.83 +0.1
3,906,716 + CA264_16750 0.83 -0.6
3,906,717 - CA264_16750 0.83 -0.2
3,906,717 - CA264_16750 0.83 -0.3
3,906,720 + CA264_16750 0.84 -0.0
3,906,721 - CA264_16750 0.84 +0.3
3,906,723 + CA264_16750 0.84 +0.3
3,906,778 - CA264_16750 0.87 -0.0
3,906,786 + CA264_16750 0.88 +0.1
3,906,819 - CA264_16750 0.90 -0.3
3,906,826 - +0.1
3,906,991 + -0.3
3,906,992 - -0.1
3,906,996 + +0.4
3,907,064 - +0.1
3,907,077 + -0.5
3,907,078 - +1.3
3,907,081 + -0.1
3,907,091 + +0.2
3,907,093 + +0.8
3,907,093 + -0.6
3,907,094 - +0.1
3,907,112 + -0.1
3,907,112 + +0.5
3,907,112 + +0.1
3,907,112 + +0.4
3,907,113 - -0.0
3,907,113 - -0.2
3,907,123 + +1.4
3,907,123 + -0.5
3,907,318 - -0.3
3,907,402 + -0.5
3,907,472 + -0.1
3,907,473 - +0.3
3,907,571 + +0.0
3,907,575 - +0.0
3,907,601 + CA264_16760 0.11 -0.2
3,907,618 - CA264_16760 0.12 +0.4
3,907,851 + CA264_16760 0.25 -0.2
3,907,852 - CA264_16760 0.25 +0.1
3,907,852 - CA264_16760 0.25 -0.0
3,907,852 - CA264_16760 0.25 +0.3
3,907,856 + CA264_16760 0.25 -0.1
3,907,943 + CA264_16760 0.30 +0.0
3,907,974 - CA264_16760 0.32 +1.0
3,907,985 + CA264_16760 0.32 +0.7
3,907,985 + CA264_16760 0.32 -1.6
3,907,985 + CA264_16760 0.32 -0.2
3,907,986 - CA264_16760 0.33 +0.7
3,908,038 + CA264_16760 0.35 +0.0
3,908,050 + CA264_16760 0.36 +0.3
3,908,050 + CA264_16760 0.36 -0.4
3,908,074 - CA264_16760 0.37 +0.2
3,908,103 + CA264_16760 0.39 +0.5
3,908,104 - CA264_16760 0.39 -0.1
3,908,104 - CA264_16760 0.39 -1.0
3,908,105 + CA264_16760 0.39 +0.7
3,908,105 + CA264_16760 0.39 +0.0
3,908,109 - CA264_16760 0.39 +0.9
3,908,227 - CA264_16760 0.46 +0.7
3,908,291 - CA264_16760 0.49 +0.3
3,908,291 - CA264_16760 0.49 +0.3
3,908,292 + CA264_16760 0.49 +0.2
3,908,293 - CA264_16760 0.49 -0.1
3,908,405 + CA264_16760 0.55 +0.4
3,908,408 + CA264_16760 0.56 +0.4
3,908,408 + CA264_16760 0.56 +0.1
3,908,409 - CA264_16760 0.56 -1.0
3,908,411 + CA264_16760 0.56 -0.7
3,908,411 + CA264_16760 0.56 +0.1
3,908,464 + CA264_16760 0.59 -0.3
3,908,464 + CA264_16760 0.59 +0.4
3,908,465 - CA264_16760 0.59 -0.2
3,908,465 - CA264_16760 0.59 -0.4
3,908,468 + CA264_16760 0.59 +0.1
3,908,469 - CA264_16760 0.59 -0.3
3,908,536 + CA264_16760 0.63 +0.3
3,908,547 - CA264_16760 0.63 +0.9
3,908,547 - CA264_16760 0.63 -0.3
3,908,598 + CA264_16760 0.66 -0.1
3,908,598 + CA264_16760 0.66 -0.4
3,908,599 - CA264_16760 0.66 +1.9
3,908,603 + CA264_16760 0.66 -0.1
3,908,603 + CA264_16760 0.66 -0.9
3,908,603 + CA264_16760 0.66 -2.2
3,908,603 + CA264_16760 0.66 -0.1
3,908,603 + CA264_16760 0.66 +0.1
3,908,604 - CA264_16760 0.66 +2.0
3,908,604 - CA264_16760 0.66 -0.5
3,908,604 - CA264_16760 0.66 +0.0
3,908,649 + CA264_16760 0.69 -1.1
3,908,659 + CA264_16760 0.69 +0.3
3,908,661 + CA264_16760 0.70 +1.4
3,908,662 - CA264_16760 0.70 +0.2
3,908,665 + CA264_16760 0.70 +0.2
3,908,740 + CA264_16760 0.74 -0.2
3,908,740 + CA264_16760 0.74 -0.1
3,908,741 - CA264_16760 0.74 -0.4
3,908,741 - CA264_16760 0.74 +0.7
3,908,744 + CA264_16760 0.74 -0.3
3,908,745 - CA264_16760 0.74 -0.1
3,908,745 - CA264_16760 0.74 +0.5
3,908,745 - CA264_16760 0.74 +0.2
3,908,898 - CA264_16760 0.83 -0.1
3,908,901 + CA264_16760 0.83 +0.4
3,908,901 + CA264_16760 0.83 +0.6
3,908,901 + CA264_16760 0.83 +0.2
3,908,902 - CA264_16760 0.83 +0.0
3,908,902 - CA264_16760 0.83 +0.3
3,908,902 - CA264_16760 0.83 +1.3
3,908,924 + CA264_16760 0.84 +0.8
3,908,925 - CA264_16760 0.84 -0.9
3,908,946 - CA264_16760 0.85 -0.4
3,909,212 + +0.2
3,909,233 + -0.2
3,909,234 - +0.3
3,909,254 + -0.9
3,909,254 + -0.5
3,909,316 + +0.5
3,909,382 + -0.7
3,909,382 + +1.6
3,909,383 - -1.3
3,909,437 + +1.0
3,909,590 + CA264_16765 0.15 +0.1
3,909,640 - CA264_16765 0.19 -0.4
3,909,669 + CA264_16765 0.22 +0.3
3,909,874 + CA264_16765 0.40 -0.7
3,909,875 - CA264_16765 0.40 +1.4
3,909,884 - CA264_16765 0.41 -0.4
3,910,043 - CA264_16765 0.55 +0.4
3,910,121 + CA264_16765 0.62 -0.9
3,910,194 - CA264_16765 0.68 -0.3
3,910,194 - CA264_16765 0.68 -1.4
3,910,194 - CA264_16765 0.68 +0.2
3,910,194 - CA264_16765 0.68 -0.8
3,910,203 + CA264_16765 0.69 -0.8

Or see this region's nucleotide sequence