Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16125 and CA264_16130 are separated by 280 nucleotides CA264_16130 and CA264_16135 are separated by 28 nucleotides CA264_16135 and CA264_16140 are separated by 31 nucleotides
CA264_16125: CA264_16125 - DNA-binding response regulator, at 3,754,439 to 3,755,182
_16125
CA264_16130: CA264_16130 - TetR family transcriptional regulator, at 3,755,463 to 3,756,095
_16130
CA264_16135: CA264_16135 - transporter, at 3,756,124 to 3,757,470
_16135
CA264_16140: CA264_16140 - efflux transporter periplasmic adaptor subunit, at 3,757,502 to 3,758,653
_16140
Position (kb)
3756
3757
3758 Strain fitness (log2 ratio)
-2
-1
0
1 at 3755.152 kb on + strand at 3755.378 kb on + strand at 3755.456 kb on + strand at 3755.501 kb on + strand at 3755.598 kb on + strand, within CA264_16130 at 3755.631 kb on + strand, within CA264_16130 at 3755.837 kb on + strand, within CA264_16130 at 3755.838 kb on - strand, within CA264_16130 at 3755.982 kb on + strand, within CA264_16130 at 3756.105 kb on - strand at 3756.107 kb on + strand at 3756.117 kb on + strand at 3756.123 kb on + strand at 3756.124 kb on - strand at 3756.149 kb on + strand at 3756.155 kb on + strand at 3756.156 kb on - strand at 3756.156 kb on - strand at 3756.156 kb on - strand at 3756.156 kb on - strand at 3756.178 kb on + strand at 3756.178 kb on + strand at 3756.179 kb on - strand at 3756.179 kb on - strand at 3756.217 kb on - strand at 3756.218 kb on + strand at 3756.218 kb on + strand at 3756.299 kb on + strand, within CA264_16135 at 3756.494 kb on - strand, within CA264_16135 at 3756.592 kb on + strand, within CA264_16135 at 3756.595 kb on + strand, within CA264_16135 at 3756.595 kb on + strand, within CA264_16135 at 3756.595 kb on + strand, within CA264_16135 at 3756.596 kb on - strand, within CA264_16135 at 3756.905 kb on - strand, within CA264_16135 at 3756.922 kb on + strand, within CA264_16135 at 3756.986 kb on - strand, within CA264_16135 at 3757.015 kb on + strand, within CA264_16135 at 3757.021 kb on + strand, within CA264_16135 at 3757.045 kb on - strand, within CA264_16135 at 3757.045 kb on - strand, within CA264_16135 at 3757.045 kb on - strand, within CA264_16135 at 3757.070 kb on - strand, within CA264_16135 at 3757.084 kb on + strand, within CA264_16135 at 3757.085 kb on - strand, within CA264_16135 at 3757.136 kb on - strand, within CA264_16135 at 3757.158 kb on - strand, within CA264_16135 at 3757.203 kb on + strand, within CA264_16135 at 3757.335 kb on - strand, within CA264_16135 at 3757.397 kb on - strand at 3757.407 kb on - strand at 3757.408 kb on + strand at 3757.409 kb on - strand at 3757.430 kb on + strand at 3757.430 kb on + strand at 3757.514 kb on - strand at 3757.515 kb on + strand at 3757.597 kb on - strand at 3757.746 kb on + strand, within CA264_16140 at 3757.822 kb on - strand, within CA264_16140 at 3757.894 kb on - strand, within CA264_16140 at 3757.953 kb on + strand, within CA264_16140 at 3757.986 kb on - strand, within CA264_16140 at 3758.066 kb on - strand, within CA264_16140 at 3758.097 kb on + strand, within CA264_16140 at 3758.098 kb on - strand, within CA264_16140 at 3758.315 kb on - strand, within CA264_16140 at 3758.416 kb on - strand, within CA264_16140 at 3758.456 kb on + strand, within CA264_16140 at 3758.456 kb on + strand, within CA264_16140 at 3758.457 kb on - strand, within CA264_16140 at 3758.462 kb on + strand, within CA264_16140
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 3,755,152 + -0.1 3,755,378 + -0.1 3,755,456 + -0.1 3,755,501 + +0.1 3,755,598 + CA264_16130 0.21 -1.0 3,755,631 + CA264_16130 0.27 +0.1 3,755,837 + CA264_16130 0.59 -0.2 3,755,838 - CA264_16130 0.59 -0.0 3,755,982 + CA264_16130 0.82 +0.0 3,756,105 - +0.1 3,756,107 + +0.4 3,756,117 + -0.8 3,756,123 + -1.4 3,756,124 - -0.0 3,756,149 + -0.1 3,756,155 + -1.0 3,756,156 - -0.6 3,756,156 - -0.5 3,756,156 - -0.6 3,756,156 - -1.8 3,756,178 + +0.1 3,756,178 + -1.6 3,756,179 - +0.6 3,756,179 - -0.5 3,756,217 - +0.3 3,756,218 + -0.7 3,756,218 + -1.2 3,756,299 + CA264_16135 0.13 -0.9 3,756,494 - CA264_16135 0.27 -0.6 3,756,592 + CA264_16135 0.35 -1.2 3,756,595 + CA264_16135 0.35 +1.3 3,756,595 + CA264_16135 0.35 +0.4 3,756,595 + CA264_16135 0.35 -2.3 3,756,596 - CA264_16135 0.35 -0.4 3,756,905 - CA264_16135 0.58 +0.2 3,756,922 + CA264_16135 0.59 -0.7 3,756,986 - CA264_16135 0.64 -0.4 3,757,015 + CA264_16135 0.66 -0.1 3,757,021 + CA264_16135 0.67 -1.3 3,757,045 - CA264_16135 0.68 -0.5 3,757,045 - CA264_16135 0.68 -0.6 3,757,045 - CA264_16135 0.68 -0.7 3,757,070 - CA264_16135 0.70 -0.4 3,757,084 + CA264_16135 0.71 -0.3 3,757,085 - CA264_16135 0.71 +0.1 3,757,136 - CA264_16135 0.75 +0.4 3,757,158 - CA264_16135 0.77 -0.9 3,757,203 + CA264_16135 0.80 +0.2 3,757,335 - CA264_16135 0.90 +0.8 3,757,397 - +0.4 3,757,407 - -2.6 3,757,408 + -1.4 3,757,409 - -0.6 3,757,430 + -1.3 3,757,430 + +0.5 3,757,514 - -0.2 3,757,515 + -0.2 3,757,597 - -0.7 3,757,746 + CA264_16140 0.21 -0.6 3,757,822 - CA264_16140 0.28 -0.3 3,757,894 - CA264_16140 0.34 +0.6 3,757,953 + CA264_16140 0.39 -0.6 3,757,986 - CA264_16140 0.42 -0.6 3,758,066 - CA264_16140 0.49 +0.7 3,758,097 + CA264_16140 0.52 +1.3 3,758,098 - CA264_16140 0.52 +0.1 3,758,315 - CA264_16140 0.71 +0.8 3,758,416 - CA264_16140 0.79 -0.5 3,758,456 + CA264_16140 0.83 -0.5 3,758,456 + CA264_16140 0.83 -0.7 3,758,457 - CA264_16140 0.83 -0.3 3,758,462 + CA264_16140 0.83 -0.6
Or see this region's nucleotide sequence