Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15090 and CA264_15095 are separated by 77 nucleotides CA264_15095 and CA264_15100 are separated by 16 nucleotides CA264_15100 and CA264_15105 are separated by 279 nucleotides CA264_15105 and CA264_15110 are separated by 232 nucleotides
CA264_15090: CA264_15090 - STAS/SEC14 domain-containing protein, at 3,542,615 to 3,543,352
_15090
CA264_15095: CA264_15095 - hypothetical protein, at 3,543,430 to 3,543,627
_15095
CA264_15100: CA264_15100 - hypothetical protein, at 3,543,644 to 3,544,213
_15100
CA264_15105: CA264_15105 - hypothetical protein, at 3,544,493 to 3,544,726
_15105
CA264_15110: CA264_15110 - hypothetical protein, at 3,544,959 to 3,545,150
_15110
Position (kb)
3543
3544
3545 Strain fitness (log2 ratio)
-2
-1
0
1 at 3542.656 kb on + strand at 3542.660 kb on + strand at 3542.660 kb on + strand at 3542.882 kb on + strand, within CA264_15090 at 3543.045 kb on - strand, within CA264_15090 at 3543.110 kb on + strand, within CA264_15090 at 3543.153 kb on - strand, within CA264_15090 at 3543.153 kb on - strand, within CA264_15090 at 3543.179 kb on + strand, within CA264_15090 at 3543.179 kb on + strand, within CA264_15090 at 3543.179 kb on + strand, within CA264_15090 at 3543.180 kb on - strand, within CA264_15090 at 3543.217 kb on - strand, within CA264_15090 at 3543.295 kb on - strand at 3543.353 kb on - strand at 3543.368 kb on + strand at 3543.419 kb on + strand at 3543.447 kb on - strand at 3543.486 kb on - strand, within CA264_15095 at 3543.519 kb on - strand, within CA264_15095 at 3543.603 kb on - strand, within CA264_15095 at 3543.603 kb on - strand, within CA264_15095 at 3543.638 kb on - strand at 3543.638 kb on - strand at 3543.644 kb on - strand at 3543.644 kb on - strand at 3543.644 kb on - strand at 3543.644 kb on - strand at 3543.662 kb on + strand at 3543.663 kb on - strand at 3543.663 kb on - strand at 3543.665 kb on + strand at 3543.665 kb on + strand at 3543.665 kb on + strand at 3543.666 kb on - strand at 3543.666 kb on - strand at 3543.666 kb on - strand at 3543.684 kb on - strand at 3543.684 kb on - strand at 3543.717 kb on - strand, within CA264_15100 at 3543.743 kb on + strand, within CA264_15100 at 3543.744 kb on - strand, within CA264_15100 at 3543.758 kb on + strand, within CA264_15100 at 3543.758 kb on + strand, within CA264_15100 at 3543.759 kb on - strand, within CA264_15100 at 3543.768 kb on - strand, within CA264_15100 at 3543.792 kb on + strand, within CA264_15100 at 3543.793 kb on - strand, within CA264_15100 at 3543.824 kb on + strand, within CA264_15100 at 3543.834 kb on - strand, within CA264_15100 at 3543.895 kb on + strand, within CA264_15100 at 3543.896 kb on - strand, within CA264_15100 at 3544.005 kb on - strand, within CA264_15100 at 3544.007 kb on + strand, within CA264_15100 at 3544.029 kb on + strand, within CA264_15100 at 3544.029 kb on + strand, within CA264_15100 at 3544.029 kb on + strand, within CA264_15100 at 3544.029 kb on + strand, within CA264_15100 at 3544.029 kb on + strand, within CA264_15100 at 3544.029 kb on + strand, within CA264_15100 at 3544.030 kb on - strand, within CA264_15100 at 3544.091 kb on + strand, within CA264_15100 at 3544.091 kb on + strand, within CA264_15100 at 3544.104 kb on - strand, within CA264_15100 at 3544.106 kb on + strand, within CA264_15100 at 3544.107 kb on - strand, within CA264_15100 at 3544.107 kb on - strand, within CA264_15100 at 3544.179 kb on + strand at 3544.233 kb on - strand at 3544.273 kb on + strand at 3544.279 kb on + strand at 3544.279 kb on + strand at 3544.286 kb on + strand at 3544.287 kb on - strand at 3544.289 kb on + strand at 3544.292 kb on + strand at 3544.292 kb on + strand at 3544.292 kb on + strand at 3544.491 kb on - strand at 3544.494 kb on + strand at 3544.495 kb on - strand at 3544.499 kb on + strand at 3544.502 kb on + strand at 3544.502 kb on + strand at 3544.503 kb on - strand at 3544.507 kb on + strand at 3544.508 kb on - strand at 3544.508 kb on - strand at 3544.508 kb on - strand at 3544.508 kb on - strand at 3544.508 kb on - strand at 3544.510 kb on + strand at 3544.511 kb on - strand at 3544.514 kb on + strand at 3544.514 kb on + strand at 3544.515 kb on - strand at 3544.539 kb on + strand, within CA264_15105 at 3544.540 kb on - strand, within CA264_15105 at 3544.540 kb on - strand, within CA264_15105 at 3544.580 kb on + strand, within CA264_15105 at 3544.580 kb on + strand, within CA264_15105 at 3544.616 kb on + strand, within CA264_15105 at 3544.616 kb on + strand, within CA264_15105 at 3544.704 kb on - strand at 3544.704 kb on - strand at 3544.708 kb on + strand at 3544.716 kb on - strand at 3544.726 kb on + strand at 3544.961 kb on - strand at 3545.050 kb on - strand, within CA264_15110 at 3545.139 kb on + strand at 3545.139 kb on + strand at 3545.140 kb on - strand at 3545.140 kb on - strand at 3545.140 kb on - strand at 3545.164 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 3,542,656 + +0.2 3,542,660 + -0.9 3,542,660 + -0.3 3,542,882 + CA264_15090 0.36 +1.1 3,543,045 - CA264_15090 0.58 -1.2 3,543,110 + CA264_15090 0.67 -0.6 3,543,153 - CA264_15090 0.73 -1.7 3,543,153 - CA264_15090 0.73 -1.0 3,543,179 + CA264_15090 0.76 -0.3 3,543,179 + CA264_15090 0.76 -2.0 3,543,179 + CA264_15090 0.76 +0.1 3,543,180 - CA264_15090 0.77 -0.4 3,543,217 - CA264_15090 0.82 -0.2 3,543,295 - +0.3 3,543,353 - +0.2 3,543,368 + +1.3 3,543,419 + -0.0 3,543,447 - -1.9 3,543,486 - CA264_15095 0.28 -1.1 3,543,519 - CA264_15095 0.45 -0.3 3,543,603 - CA264_15095 0.87 -0.7 3,543,603 - CA264_15095 0.87 -0.2 3,543,638 - +0.2 3,543,638 - +1.5 3,543,644 - -0.1 3,543,644 - +0.0 3,543,644 - +0.4 3,543,644 - +0.3 3,543,662 + -0.5 3,543,663 - +0.8 3,543,663 - -0.3 3,543,665 + +0.3 3,543,665 + -0.1 3,543,665 + -0.4 3,543,666 - -1.5 3,543,666 - -0.4 3,543,666 - +1.1 3,543,684 - -0.2 3,543,684 - -0.3 3,543,717 - CA264_15100 0.13 +0.6 3,543,743 + CA264_15100 0.17 +0.3 3,543,744 - CA264_15100 0.18 -0.8 3,543,758 + CA264_15100 0.20 -0.1 3,543,758 + CA264_15100 0.20 +0.6 3,543,759 - CA264_15100 0.20 +0.3 3,543,768 - CA264_15100 0.22 -0.4 3,543,792 + CA264_15100 0.26 +1.1 3,543,793 - CA264_15100 0.26 +0.0 3,543,824 + CA264_15100 0.32 -0.9 3,543,834 - CA264_15100 0.33 +0.4 3,543,895 + CA264_15100 0.44 +0.1 3,543,896 - CA264_15100 0.44 -0.1 3,544,005 - CA264_15100 0.63 +0.4 3,544,007 + CA264_15100 0.64 +0.8 3,544,029 + CA264_15100 0.68 -0.0 3,544,029 + CA264_15100 0.68 +0.6 3,544,029 + CA264_15100 0.68 -0.0 3,544,029 + CA264_15100 0.68 +0.5 3,544,029 + CA264_15100 0.68 +0.0 3,544,029 + CA264_15100 0.68 +0.8 3,544,030 - CA264_15100 0.68 +0.1 3,544,091 + CA264_15100 0.78 -0.4 3,544,091 + CA264_15100 0.78 +0.2 3,544,104 - CA264_15100 0.81 -0.3 3,544,106 + CA264_15100 0.81 -0.1 3,544,107 - CA264_15100 0.81 +1.1 3,544,107 - CA264_15100 0.81 +1.1 3,544,179 + -0.2 3,544,233 - -0.2 3,544,273 + +1.0 3,544,279 + +0.4 3,544,279 + +0.1 3,544,286 + -1.7 3,544,287 - +0.8 3,544,289 + -0.1 3,544,292 + +0.4 3,544,292 + -1.3 3,544,292 + +0.3 3,544,491 - +0.0 3,544,494 + +1.1 3,544,495 - -0.4 3,544,499 + +0.0 3,544,502 + -1.1 3,544,502 + +1.1 3,544,503 - +0.1 3,544,507 + +0.7 3,544,508 - +0.2 3,544,508 - -0.0 3,544,508 - +0.5 3,544,508 - -0.3 3,544,508 - -0.6 3,544,510 + +0.1 3,544,511 - +0.3 3,544,514 + -0.5 3,544,514 + +0.1 3,544,515 - -0.8 3,544,539 + CA264_15105 0.20 -0.5 3,544,540 - CA264_15105 0.20 +0.4 3,544,540 - CA264_15105 0.20 +0.1 3,544,580 + CA264_15105 0.37 -0.4 3,544,580 + CA264_15105 0.37 -1.4 3,544,616 + CA264_15105 0.53 +0.3 3,544,616 + CA264_15105 0.53 -0.2 3,544,704 - -0.5 3,544,704 - -0.5 3,544,708 + -0.7 3,544,716 - +1.4 3,544,726 + -0.5 3,544,961 - -0.6 3,545,050 - CA264_15110 0.47 +0.9 3,545,139 + +1.4 3,545,139 + +0.4 3,545,140 - -0.8 3,545,140 - -0.7 3,545,140 - -0.3 3,545,164 + +0.6
Or see this region's nucleotide sequence