Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_11010

Experiment: m.b. benzoic 0.58 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_11000 and CA264_11005 are separated by 5 nucleotidesCA264_11005 and CA264_11010 are separated by 65 nucleotidesCA264_11010 and CA264_11015 are separated by 26 nucleotides CA264_11000: CA264_11000 - methionyl-tRNA formyltransferase, at 2,536,368 to 2,537,297 _11000 CA264_11005: CA264_11005 - dihydrofolate reductase, at 2,537,303 to 2,537,788 _11005 CA264_11010: CA264_11010 - hypothetical protein, at 2,537,854 to 2,542,860 _11010 CA264_11015: CA264_11015 - hypothetical protein, at 2,542,887 to 2,543,948 _11015 Position (kb) 2537 2538 2539 2540 2541 2542 2543Strain fitness (log2 ratio) -2 -1 0 1 2at 2537.294 kb on - strandat 2537.294 kb on - strandat 2537.303 kb on - strandat 2537.787 kb on - strandat 2537.787 kb on - strandat 2537.789 kb on + strandat 2537.790 kb on - strandat 2537.855 kb on + strandat 2537.855 kb on + strandat 2537.867 kb on + strandat 2537.874 kb on + strandat 2537.875 kb on - strandat 2537.963 kb on + strandat 2537.964 kb on - strandat 2537.990 kb on + strandat 2537.990 kb on + strandat 2537.990 kb on + strandat 2537.990 kb on + strandat 2538.015 kb on - strandat 2538.015 kb on - strandat 2538.015 kb on - strandat 2538.027 kb on + strandat 2538.027 kb on + strandat 2538.142 kb on - strandat 2538.186 kb on - strandat 2538.320 kb on + strandat 2538.320 kb on + strandat 2538.321 kb on - strandat 2538.359 kb on + strand, within CA264_11010at 2538.359 kb on + strand, within CA264_11010at 2538.360 kb on - strand, within CA264_11010at 2538.360 kb on - strand, within CA264_11010at 2538.360 kb on - strand, within CA264_11010at 2538.365 kb on - strand, within CA264_11010at 2538.525 kb on + strand, within CA264_11010at 2538.526 kb on - strand, within CA264_11010at 2538.526 kb on - strand, within CA264_11010at 2538.603 kb on + strand, within CA264_11010at 2538.603 kb on + strand, within CA264_11010at 2538.604 kb on - strand, within CA264_11010at 2538.642 kb on - strand, within CA264_11010at 2538.688 kb on - strand, within CA264_11010at 2538.689 kb on + strand, within CA264_11010at 2538.690 kb on - strand, within CA264_11010at 2538.728 kb on - strand, within CA264_11010at 2538.744 kb on + strand, within CA264_11010at 2538.841 kb on + strand, within CA264_11010at 2538.970 kb on + strand, within CA264_11010at 2539.050 kb on + strand, within CA264_11010at 2539.113 kb on + strand, within CA264_11010at 2539.116 kb on - strand, within CA264_11010at 2539.120 kb on - strand, within CA264_11010at 2539.191 kb on + strand, within CA264_11010at 2539.198 kb on - strand, within CA264_11010at 2539.394 kb on - strand, within CA264_11010at 2539.395 kb on + strand, within CA264_11010at 2539.396 kb on - strand, within CA264_11010at 2539.459 kb on - strand, within CA264_11010at 2539.469 kb on + strand, within CA264_11010at 2539.469 kb on + strand, within CA264_11010at 2539.469 kb on + strand, within CA264_11010at 2539.469 kb on + strand, within CA264_11010at 2539.469 kb on + strand, within CA264_11010at 2539.469 kb on + strand, within CA264_11010at 2539.469 kb on + strand, within CA264_11010at 2539.470 kb on - strand, within CA264_11010at 2539.470 kb on - strand, within CA264_11010at 2539.470 kb on - strand, within CA264_11010at 2539.470 kb on - strand, within CA264_11010at 2539.470 kb on - strand, within CA264_11010at 2539.470 kb on - strand, within CA264_11010at 2539.473 kb on - strand, within CA264_11010at 2539.473 kb on - strand, within CA264_11010at 2539.492 kb on + strand, within CA264_11010at 2539.594 kb on - strand, within CA264_11010at 2539.594 kb on - strand, within CA264_11010at 2539.615 kb on - strand, within CA264_11010at 2539.623 kb on + strand, within CA264_11010at 2539.623 kb on + strand, within CA264_11010at 2539.624 kb on - strand, within CA264_11010at 2539.679 kb on + strand, within CA264_11010at 2539.801 kb on + strand, within CA264_11010at 2539.802 kb on - strand, within CA264_11010at 2539.826 kb on - strand, within CA264_11010at 2539.845 kb on - strand, within CA264_11010at 2539.881 kb on + strand, within CA264_11010at 2539.881 kb on + strand, within CA264_11010at 2539.884 kb on - strand, within CA264_11010at 2539.884 kb on - strand, within CA264_11010at 2539.929 kb on - strand, within CA264_11010at 2539.929 kb on - strand, within CA264_11010at 2540.081 kb on + strand, within CA264_11010at 2540.081 kb on + strand, within CA264_11010at 2540.082 kb on - strand, within CA264_11010at 2540.082 kb on - strand, within CA264_11010at 2540.109 kb on + strand, within CA264_11010at 2540.122 kb on + strand, within CA264_11010at 2540.149 kb on - strand, within CA264_11010at 2540.149 kb on - strand, within CA264_11010at 2540.149 kb on - strand, within CA264_11010at 2540.149 kb on - strand, within CA264_11010at 2540.153 kb on + strand, within CA264_11010at 2540.153 kb on + strand, within CA264_11010at 2540.154 kb on - strand, within CA264_11010at 2540.196 kb on - strand, within CA264_11010at 2540.335 kb on + strand, within CA264_11010at 2540.336 kb on - strand, within CA264_11010at 2540.336 kb on - strand, within CA264_11010at 2540.532 kb on - strand, within CA264_11010at 2540.532 kb on - strand, within CA264_11010at 2540.534 kb on + strand, within CA264_11010at 2540.534 kb on + strand, within CA264_11010at 2540.534 kb on + strand, within CA264_11010at 2540.535 kb on - strand, within CA264_11010at 2540.624 kb on + strand, within CA264_11010at 2540.625 kb on - strand, within CA264_11010at 2540.684 kb on + strand, within CA264_11010at 2540.687 kb on + strand, within CA264_11010at 2540.687 kb on + strand, within CA264_11010at 2540.723 kb on + strand, within CA264_11010at 2540.723 kb on + strand, within CA264_11010at 2540.724 kb on - strand, within CA264_11010at 2540.728 kb on - strand, within CA264_11010at 2540.729 kb on + strand, within CA264_11010at 2540.729 kb on + strand, within CA264_11010at 2540.730 kb on - strand, within CA264_11010at 2540.730 kb on - strand, within CA264_11010at 2540.742 kb on - strand, within CA264_11010at 2540.844 kb on + strand, within CA264_11010at 2540.845 kb on - strand, within CA264_11010at 2540.856 kb on + strand, within CA264_11010at 2540.856 kb on + strand, within CA264_11010at 2540.857 kb on - strand, within CA264_11010at 2540.925 kb on - strand, within CA264_11010at 2540.931 kb on + strand, within CA264_11010at 2541.063 kb on + strand, within CA264_11010at 2541.063 kb on + strand, within CA264_11010at 2541.064 kb on - strand, within CA264_11010at 2541.064 kb on - strand, within CA264_11010at 2541.070 kb on + strand, within CA264_11010at 2541.091 kb on - strand, within CA264_11010at 2541.098 kb on + strand, within CA264_11010at 2541.098 kb on + strand, within CA264_11010at 2541.098 kb on + strand, within CA264_11010at 2541.099 kb on - strand, within CA264_11010at 2541.211 kb on + strand, within CA264_11010at 2541.250 kb on + strand, within CA264_11010at 2541.280 kb on + strand, within CA264_11010at 2541.280 kb on + strand, within CA264_11010at 2541.280 kb on + strand, within CA264_11010at 2541.281 kb on - strand, within CA264_11010at 2541.281 kb on - strand, within CA264_11010at 2541.281 kb on - strand, within CA264_11010at 2541.281 kb on - strand, within CA264_11010at 2541.284 kb on + strand, within CA264_11010at 2541.284 kb on + strand, within CA264_11010at 2541.284 kb on + strand, within CA264_11010at 2541.305 kb on - strand, within CA264_11010at 2541.311 kb on + strand, within CA264_11010at 2541.477 kb on + strand, within CA264_11010at 2541.525 kb on - strand, within CA264_11010at 2541.534 kb on + strand, within CA264_11010at 2541.578 kb on + strand, within CA264_11010at 2541.648 kb on - strand, within CA264_11010at 2541.648 kb on - strand, within CA264_11010at 2541.648 kb on - strand, within CA264_11010at 2541.669 kb on - strand, within CA264_11010at 2541.669 kb on - strand, within CA264_11010at 2541.669 kb on - strand, within CA264_11010at 2541.683 kb on - strand, within CA264_11010at 2541.738 kb on + strand, within CA264_11010at 2541.739 kb on - strand, within CA264_11010at 2541.788 kb on - strand, within CA264_11010at 2541.906 kb on - strand, within CA264_11010at 2541.984 kb on + strand, within CA264_11010at 2541.985 kb on - strand, within CA264_11010at 2541.988 kb on - strand, within CA264_11010at 2542.026 kb on + strand, within CA264_11010at 2542.030 kb on - strand, within CA264_11010at 2542.141 kb on - strand, within CA264_11010at 2542.187 kb on + strand, within CA264_11010at 2542.328 kb on + strand, within CA264_11010at 2542.329 kb on - strand, within CA264_11010at 2542.367 kb on + strandat 2542.468 kb on - strandat 2542.469 kb on + strandat 2542.469 kb on + strandat 2542.469 kb on + strandat 2542.469 kb on + strandat 2542.469 kb on + strandat 2542.469 kb on + strandat 2542.470 kb on - strandat 2542.470 kb on - strandat 2542.476 kb on + strandat 2542.478 kb on + strandat 2542.479 kb on - strandat 2542.479 kb on - strandat 2542.511 kb on + strandat 2542.511 kb on + strandat 2542.563 kb on - strandat 2542.563 kb on - strandat 2542.604 kb on + strandat 2542.688 kb on + strandat 2542.698 kb on + strandat 2542.699 kb on - strandat 2542.700 kb on + strandat 2542.701 kb on - strandat 2542.734 kb on - strandat 2542.823 kb on - strandat 2542.823 kb on - strandat 2542.828 kb on + strandat 2542.857 kb on - strandat 2542.881 kb on + strandat 2542.916 kb on + strandat 2543.006 kb on + strand, within CA264_11015at 2543.175 kb on - strand, within CA264_11015at 2543.228 kb on + strand, within CA264_11015at 2543.262 kb on + strand, within CA264_11015at 2543.262 kb on + strand, within CA264_11015at 2543.262 kb on + strand, within CA264_11015at 2543.262 kb on + strand, within CA264_11015at 2543.262 kb on + strand, within CA264_11015at 2543.262 kb on + strand, within CA264_11015at 2543.263 kb on - strand, within CA264_11015at 2543.264 kb on + strand, within CA264_11015at 2543.264 kb on + strand, within CA264_11015at 2543.324 kb on - strand, within CA264_11015at 2543.324 kb on - strand, within CA264_11015at 2543.375 kb on + strand, within CA264_11015at 2543.376 kb on - strand, within CA264_11015at 2543.376 kb on - strand, within CA264_11015at 2543.379 kb on - strand, within CA264_11015at 2543.379 kb on - strand, within CA264_11015at 2543.449 kb on + strand, within CA264_11015at 2543.450 kb on - strand, within CA264_11015at 2543.450 kb on - strand, within CA264_11015at 2543.539 kb on + strand, within CA264_11015at 2543.590 kb on + strand, within CA264_11015at 2543.600 kb on - strand, within CA264_11015at 2543.710 kb on + strand, within CA264_11015at 2543.764 kb on + strand, within CA264_11015at 2543.764 kb on + strand, within CA264_11015at 2543.764 kb on + strand, within CA264_11015

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml
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2,537,294 - -0.0
2,537,294 - -1.5
2,537,303 - -0.3
2,537,787 - -0.6
2,537,787 - -0.0
2,537,789 + -0.4
2,537,790 - +0.8
2,537,855 + -0.7
2,537,855 + -0.5
2,537,867 + +0.2
2,537,874 + -0.2
2,537,875 - -0.8
2,537,963 + +0.9
2,537,964 - -1.4
2,537,990 + +0.8
2,537,990 + +1.4
2,537,990 + +0.3
2,537,990 + -0.4
2,538,015 - +0.8
2,538,015 - +0.1
2,538,015 - -0.3
2,538,027 + +2.4
2,538,027 + +0.7
2,538,142 - -0.3
2,538,186 - -0.1
2,538,320 + -0.2
2,538,320 + +0.5
2,538,321 - +0.8
2,538,359 + CA264_11010 0.10 +0.9
2,538,359 + CA264_11010 0.10 -0.5
2,538,360 - CA264_11010 0.10 -0.3
2,538,360 - CA264_11010 0.10 +1.8
2,538,360 - CA264_11010 0.10 +1.0
2,538,365 - CA264_11010 0.10 -0.4
2,538,525 + CA264_11010 0.13 -0.4
2,538,526 - CA264_11010 0.13 +0.3
2,538,526 - CA264_11010 0.13 -0.8
2,538,603 + CA264_11010 0.15 -0.1
2,538,603 + CA264_11010 0.15 -0.4
2,538,604 - CA264_11010 0.15 +0.6
2,538,642 - CA264_11010 0.16 -0.6
2,538,688 - CA264_11010 0.17 +1.6
2,538,689 + CA264_11010 0.17 +0.7
2,538,690 - CA264_11010 0.17 +0.1
2,538,728 - CA264_11010 0.17 -0.5
2,538,744 + CA264_11010 0.18 +0.1
2,538,841 + CA264_11010 0.20 +0.1
2,538,970 + CA264_11010 0.22 +0.3
2,539,050 + CA264_11010 0.24 -0.1
2,539,113 + CA264_11010 0.25 +0.2
2,539,116 - CA264_11010 0.25 +0.3
2,539,120 - CA264_11010 0.25 +0.2
2,539,191 + CA264_11010 0.27 +0.5
2,539,198 - CA264_11010 0.27 +0.1
2,539,394 - CA264_11010 0.31 +0.1
2,539,395 + CA264_11010 0.31 +0.0
2,539,396 - CA264_11010 0.31 +0.0
2,539,459 - CA264_11010 0.32 +0.4
2,539,469 + CA264_11010 0.32 +0.5
2,539,469 + CA264_11010 0.32 +0.3
2,539,469 + CA264_11010 0.32 -0.4
2,539,469 + CA264_11010 0.32 -0.3
2,539,469 + CA264_11010 0.32 -0.7
2,539,469 + CA264_11010 0.32 +0.4
2,539,469 + CA264_11010 0.32 +0.0
2,539,470 - CA264_11010 0.32 +0.8
2,539,470 - CA264_11010 0.32 +0.4
2,539,470 - CA264_11010 0.32 +0.1
2,539,470 - CA264_11010 0.32 -1.9
2,539,470 - CA264_11010 0.32 -0.5
2,539,470 - CA264_11010 0.32 -0.0
2,539,473 - CA264_11010 0.32 +0.1
2,539,473 - CA264_11010 0.32 -1.3
2,539,492 + CA264_11010 0.33 +0.1
2,539,594 - CA264_11010 0.35 +1.4
2,539,594 - CA264_11010 0.35 +0.2
2,539,615 - CA264_11010 0.35 -0.6
2,539,623 + CA264_11010 0.35 -0.6
2,539,623 + CA264_11010 0.35 +0.1
2,539,624 - CA264_11010 0.35 -0.3
2,539,679 + CA264_11010 0.36 -0.3
2,539,801 + CA264_11010 0.39 +0.9
2,539,802 - CA264_11010 0.39 +0.2
2,539,826 - CA264_11010 0.39 -0.9
2,539,845 - CA264_11010 0.40 +0.5
2,539,881 + CA264_11010 0.40 +0.0
2,539,881 + CA264_11010 0.40 +0.4
2,539,884 - CA264_11010 0.41 +0.0
2,539,884 - CA264_11010 0.41 +1.9
2,539,929 - CA264_11010 0.41 -0.2
2,539,929 - CA264_11010 0.41 +0.1
2,540,081 + CA264_11010 0.44 +0.3
2,540,081 + CA264_11010 0.44 +0.1
2,540,082 - CA264_11010 0.44 +0.4
2,540,082 - CA264_11010 0.44 +0.1
2,540,109 + CA264_11010 0.45 -1.3
2,540,122 + CA264_11010 0.45 +0.3
2,540,149 - CA264_11010 0.46 -0.9
2,540,149 - CA264_11010 0.46 -1.0
2,540,149 - CA264_11010 0.46 +1.4
2,540,149 - CA264_11010 0.46 +0.2
2,540,153 + CA264_11010 0.46 +0.1
2,540,153 + CA264_11010 0.46 -0.1
2,540,154 - CA264_11010 0.46 +0.3
2,540,196 - CA264_11010 0.47 +0.0
2,540,335 + CA264_11010 0.50 -0.4
2,540,336 - CA264_11010 0.50 -0.2
2,540,336 - CA264_11010 0.50 +0.9
2,540,532 - CA264_11010 0.53 +0.6
2,540,532 - CA264_11010 0.53 +0.2
2,540,534 + CA264_11010 0.54 +0.0
2,540,534 + CA264_11010 0.54 -0.1
2,540,534 + CA264_11010 0.54 -0.4
2,540,535 - CA264_11010 0.54 -0.3
2,540,624 + CA264_11010 0.55 -1.0
2,540,625 - CA264_11010 0.55 +0.6
2,540,684 + CA264_11010 0.57 +0.0
2,540,687 + CA264_11010 0.57 -0.6
2,540,687 + CA264_11010 0.57 -0.4
2,540,723 + CA264_11010 0.57 +0.5
2,540,723 + CA264_11010 0.57 -1.0
2,540,724 - CA264_11010 0.57 +0.0
2,540,728 - CA264_11010 0.57 -0.3
2,540,729 + CA264_11010 0.57 -0.0
2,540,729 + CA264_11010 0.57 -0.0
2,540,730 - CA264_11010 0.57 +0.2
2,540,730 - CA264_11010 0.57 +0.6
2,540,742 - CA264_11010 0.58 -0.6
2,540,844 + CA264_11010 0.60 +1.5
2,540,845 - CA264_11010 0.60 +0.6
2,540,856 + CA264_11010 0.60 +1.2
2,540,856 + CA264_11010 0.60 -0.5
2,540,857 - CA264_11010 0.60 -1.1
2,540,925 - CA264_11010 0.61 -0.4
2,540,931 + CA264_11010 0.61 -1.0
2,541,063 + CA264_11010 0.64 -0.8
2,541,063 + CA264_11010 0.64 +0.3
2,541,064 - CA264_11010 0.64 +0.2
2,541,064 - CA264_11010 0.64 -1.0
2,541,070 + CA264_11010 0.64 -0.4
2,541,091 - CA264_11010 0.65 -0.2
2,541,098 + CA264_11010 0.65 -0.1
2,541,098 + CA264_11010 0.65 +0.6
2,541,098 + CA264_11010 0.65 -0.3
2,541,099 - CA264_11010 0.65 -0.6
2,541,211 + CA264_11010 0.67 +0.1
2,541,250 + CA264_11010 0.68 +0.2
2,541,280 + CA264_11010 0.68 -0.0
2,541,280 + CA264_11010 0.68 +0.2
2,541,280 + CA264_11010 0.68 +0.1
2,541,281 - CA264_11010 0.68 -0.0
2,541,281 - CA264_11010 0.68 +2.0
2,541,281 - CA264_11010 0.68 +0.1
2,541,281 - CA264_11010 0.68 -0.2
2,541,284 + CA264_11010 0.69 -1.2
2,541,284 + CA264_11010 0.69 -0.6
2,541,284 + CA264_11010 0.69 +0.1
2,541,305 - CA264_11010 0.69 -0.4
2,541,311 + CA264_11010 0.69 -0.5
2,541,477 + CA264_11010 0.72 -0.2
2,541,525 - CA264_11010 0.73 +1.8
2,541,534 + CA264_11010 0.73 +0.0
2,541,578 + CA264_11010 0.74 -0.4
2,541,648 - CA264_11010 0.76 +0.2
2,541,648 - CA264_11010 0.76 -0.2
2,541,648 - CA264_11010 0.76 +0.1
2,541,669 - CA264_11010 0.76 +0.2
2,541,669 - CA264_11010 0.76 -1.2
2,541,669 - CA264_11010 0.76 +0.6
2,541,683 - CA264_11010 0.76 +0.7
2,541,738 + CA264_11010 0.78 +0.7
2,541,739 - CA264_11010 0.78 -1.4
2,541,788 - CA264_11010 0.79 +0.0
2,541,906 - CA264_11010 0.81 -0.9
2,541,984 + CA264_11010 0.82 -1.5
2,541,985 - CA264_11010 0.83 -0.5
2,541,988 - CA264_11010 0.83 +0.2
2,542,026 + CA264_11010 0.83 -0.1
2,542,030 - CA264_11010 0.83 +0.2
2,542,141 - CA264_11010 0.86 +1.7
2,542,187 + CA264_11010 0.87 -0.1
2,542,328 + CA264_11010 0.89 -1.1
2,542,329 - CA264_11010 0.89 -0.5
2,542,367 + +1.0
2,542,468 - +1.1
2,542,469 + -1.3
2,542,469 + +0.6
2,542,469 + -0.6
2,542,469 + -0.2
2,542,469 + +0.0
2,542,469 + -0.7
2,542,470 - -0.2
2,542,470 - -0.0
2,542,476 + +0.2
2,542,478 + +0.7
2,542,479 - +0.2
2,542,479 - +0.8
2,542,511 + +0.3
2,542,511 + +0.4
2,542,563 - +0.1
2,542,563 - -0.5
2,542,604 + +0.1
2,542,688 + -1.2
2,542,698 + -0.1
2,542,699 - -1.1
2,542,700 + -0.7
2,542,701 - -0.6
2,542,734 - -0.4
2,542,823 - +0.0
2,542,823 - +1.4
2,542,828 + +0.0
2,542,857 - -0.7
2,542,881 + -0.1
2,542,916 + +0.0
2,543,006 + CA264_11015 0.11 -0.2
2,543,175 - CA264_11015 0.27 +0.3
2,543,228 + CA264_11015 0.32 +1.1
2,543,262 + CA264_11015 0.35 -0.3
2,543,262 + CA264_11015 0.35 -1.3
2,543,262 + CA264_11015 0.35 -0.2
2,543,262 + CA264_11015 0.35 -0.7
2,543,262 + CA264_11015 0.35 -0.2
2,543,262 + CA264_11015 0.35 -1.0
2,543,263 - CA264_11015 0.35 -1.3
2,543,264 + CA264_11015 0.35 -0.6
2,543,264 + CA264_11015 0.35 -0.5
2,543,324 - CA264_11015 0.41 -0.5
2,543,324 - CA264_11015 0.41 -0.6
2,543,375 + CA264_11015 0.46 +0.6
2,543,376 - CA264_11015 0.46 -1.0
2,543,376 - CA264_11015 0.46 +0.4
2,543,379 - CA264_11015 0.46 -0.4
2,543,379 - CA264_11015 0.46 -0.2
2,543,449 + CA264_11015 0.53 +0.9
2,543,450 - CA264_11015 0.53 -0.2
2,543,450 - CA264_11015 0.53 -0.2
2,543,539 + CA264_11015 0.61 -0.6
2,543,590 + CA264_11015 0.66 -0.4
2,543,600 - CA264_11015 0.67 -0.1
2,543,710 + CA264_11015 0.77 +0.1
2,543,764 + CA264_11015 0.83 -0.8
2,543,764 + CA264_11015 0.83 -1.1
2,543,764 + CA264_11015 0.83 -0.6

Or see this region's nucleotide sequence