Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10280 and CA264_10285 are separated by 93 nucleotides CA264_10285 and CA264_10290 are separated by 66 nucleotides CA264_10290 and CA264_10295 are separated by 18 nucleotides
CA264_10280: CA264_10280 - hypothetical protein, at 2,389,422 to 2,389,739
_10280
CA264_10285: CA264_10285 - hypothetical protein, at 2,389,833 to 2,390,153
_10285
CA264_10290: CA264_10290 - hypothetical protein, at 2,390,220 to 2,391,650
_10290
CA264_10295: CA264_10295 - SusC/RagA family TonB-linked outer membrane protein, at 2,391,669 to 2,394,872
_10295
Position (kb)
2390
2391
2392 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2389.220 kb on - strand at 2389.274 kb on - strand at 2389.345 kb on + strand at 2389.442 kb on + strand at 2389.495 kb on - strand, within CA264_10280 at 2389.495 kb on - strand, within CA264_10280 at 2389.715 kb on - strand at 2389.718 kb on - strand at 2389.718 kb on - strand at 2389.748 kb on + strand at 2389.749 kb on - strand at 2389.780 kb on + strand at 2389.780 kb on + strand at 2389.781 kb on - strand at 2389.781 kb on - strand at 2389.812 kb on - strand at 2389.812 kb on - strand at 2389.847 kb on + strand at 2389.848 kb on - strand at 2389.953 kb on + strand, within CA264_10285 at 2390.039 kb on + strand, within CA264_10285 at 2390.219 kb on + strand at 2390.219 kb on + strand at 2390.219 kb on + strand at 2390.219 kb on + strand at 2390.219 kb on + strand at 2390.220 kb on - strand at 2390.220 kb on - strand at 2390.220 kb on - strand at 2390.277 kb on + strand at 2390.529 kb on + strand, within CA264_10290 at 2390.529 kb on + strand, within CA264_10290 at 2390.530 kb on - strand, within CA264_10290 at 2390.614 kb on + strand, within CA264_10290 at 2390.643 kb on - strand, within CA264_10290 at 2390.700 kb on + strand, within CA264_10290 at 2391.057 kb on + strand, within CA264_10290 at 2391.057 kb on + strand, within CA264_10290 at 2391.195 kb on + strand, within CA264_10290 at 2391.195 kb on + strand, within CA264_10290 at 2391.655 kb on - strand at 2391.660 kb on - strand at 2391.660 kb on - strand at 2391.682 kb on + strand at 2391.705 kb on + strand at 2391.706 kb on - strand at 2391.707 kb on + strand at 2391.707 kb on + strand at 2391.707 kb on + strand at 2391.707 kb on + strand at 2391.708 kb on - strand at 2391.708 kb on - strand at 2391.842 kb on + strand at 2392.202 kb on + strand, within CA264_10295 at 2392.215 kb on - strand, within CA264_10295 at 2392.224 kb on + strand, within CA264_10295 at 2392.225 kb on - strand, within CA264_10295 at 2392.425 kb on + strand, within CA264_10295 at 2392.425 kb on + strand, within CA264_10295 at 2392.443 kb on - strand, within CA264_10295 at 2392.491 kb on + strand, within CA264_10295 at 2392.492 kb on - strand, within CA264_10295 at 2392.492 kb on - strand, within CA264_10295 at 2392.492 kb on - strand, within CA264_10295 at 2392.493 kb on + strand, within CA264_10295 at 2392.493 kb on + strand, within CA264_10295 at 2392.646 kb on + strand, within CA264_10295 at 2392.647 kb on - strand, within CA264_10295 at 2392.647 kb on - strand, within CA264_10295 at 2392.647 kb on - strand, within CA264_10295 at 2392.650 kb on + strand, within CA264_10295
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 2,389,220 - +0.1 2,389,274 - +0.5 2,389,345 + -0.1 2,389,442 + +0.0 2,389,495 - CA264_10280 0.23 +0.3 2,389,495 - CA264_10280 0.23 -1.0 2,389,715 - +0.3 2,389,718 - +0.1 2,389,718 - +0.4 2,389,748 + +0.2 2,389,749 - -0.5 2,389,780 + -0.5 2,389,780 + -0.3 2,389,781 - +0.3 2,389,781 - +0.4 2,389,812 - -0.1 2,389,812 - -1.7 2,389,847 + -1.8 2,389,848 - -0.3 2,389,953 + CA264_10285 0.37 -0.4 2,390,039 + CA264_10285 0.64 -0.5 2,390,219 + -0.3 2,390,219 + -0.4 2,390,219 + -0.6 2,390,219 + -0.2 2,390,219 + -0.8 2,390,220 - -0.0 2,390,220 - -0.9 2,390,220 - +0.3 2,390,277 + +0.7 2,390,529 + CA264_10290 0.22 -0.2 2,390,529 + CA264_10290 0.22 +0.4 2,390,530 - CA264_10290 0.22 -0.8 2,390,614 + CA264_10290 0.28 +0.9 2,390,643 - CA264_10290 0.30 +0.5 2,390,700 + CA264_10290 0.34 -0.4 2,391,057 + CA264_10290 0.58 -0.6 2,391,057 + CA264_10290 0.58 -0.4 2,391,195 + CA264_10290 0.68 -0.8 2,391,195 + CA264_10290 0.68 -0.1 2,391,655 - +0.3 2,391,660 - +0.2 2,391,660 - +0.4 2,391,682 + +0.6 2,391,705 + +1.2 2,391,706 - -0.6 2,391,707 + +0.2 2,391,707 + +0.7 2,391,707 + +0.8 2,391,707 + -0.3 2,391,708 - +0.2 2,391,708 - -0.7 2,391,842 + -0.4 2,392,202 + CA264_10295 0.17 -0.1 2,392,215 - CA264_10295 0.17 -0.3 2,392,224 + CA264_10295 0.17 +0.2 2,392,225 - CA264_10295 0.17 -0.2 2,392,425 + CA264_10295 0.24 -0.5 2,392,425 + CA264_10295 0.24 -2.0 2,392,443 - CA264_10295 0.24 -0.2 2,392,491 + CA264_10295 0.26 -0.3 2,392,492 - CA264_10295 0.26 -0.8 2,392,492 - CA264_10295 0.26 -0.0 2,392,492 - CA264_10295 0.26 +0.6 2,392,493 + CA264_10295 0.26 +0.5 2,392,493 + CA264_10295 0.26 +1.9 2,392,646 + CA264_10295 0.30 -0.0 2,392,647 - CA264_10295 0.31 -0.4 2,392,647 - CA264_10295 0.31 +0.7 2,392,647 - CA264_10295 0.31 +0.3 2,392,650 + CA264_10295 0.31 -0.5
Or see this region's nucleotide sequence