Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_09890

Experiment: m.b. benzoic 0.58 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_09885 and CA264_09890 are separated by 7 nucleotidesCA264_09890 and CA264_09895 are separated by 3 nucleotides CA264_09885: CA264_09885 - hypothetical protein, at 2,301,613 to 2,304,426 _09885 CA264_09890: CA264_09890 - hypothetical protein, at 2,304,434 to 2,304,898 _09890 CA264_09895: CA264_09895 - hypothetical protein, at 2,304,902 to 2,306,335 _09895 Position (kb) 2304 2305Strain fitness (log2 ratio) -2 -1 0 1 2at 2303.534 kb on + strand, within CA264_09885at 2303.599 kb on - strand, within CA264_09885at 2303.601 kb on + strand, within CA264_09885at 2303.660 kb on + strand, within CA264_09885at 2303.661 kb on - strand, within CA264_09885at 2303.661 kb on - strand, within CA264_09885at 2303.830 kb on + strand, within CA264_09885at 2303.830 kb on + strand, within CA264_09885at 2303.831 kb on - strand, within CA264_09885at 2303.894 kb on + strand, within CA264_09885at 2303.894 kb on + strand, within CA264_09885at 2303.895 kb on - strand, within CA264_09885at 2303.947 kb on + strand, within CA264_09885at 2304.056 kb on - strand, within CA264_09885at 2304.066 kb on + strand, within CA264_09885at 2304.142 kb on - strand, within CA264_09885at 2304.294 kb on - strandat 2304.294 kb on - strandat 2304.297 kb on + strandat 2304.297 kb on + strandat 2304.297 kb on + strandat 2304.298 kb on - strandat 2304.298 kb on - strandat 2304.298 kb on - strandat 2304.298 kb on - strandat 2304.299 kb on + strandat 2304.300 kb on - strandat 2304.302 kb on + strandat 2304.302 kb on + strandat 2304.303 kb on - strandat 2304.332 kb on - strandat 2304.372 kb on + strandat 2304.373 kb on - strandat 2304.373 kb on - strandat 2304.373 kb on - strandat 2304.382 kb on + strandat 2304.382 kb on + strandat 2304.382 kb on + strandat 2304.382 kb on + strandat 2304.383 kb on - strandat 2304.383 kb on - strandat 2304.385 kb on + strandat 2304.386 kb on - strandat 2304.404 kb on - strandat 2304.416 kb on + strandat 2304.422 kb on - strandat 2304.426 kb on + strandat 2304.426 kb on + strandat 2304.426 kb on + strandat 2304.426 kb on + strandat 2304.426 kb on + strandat 2304.427 kb on - strandat 2304.427 kb on - strandat 2304.427 kb on - strandat 2304.470 kb on - strandat 2304.496 kb on + strand, within CA264_09890at 2304.497 kb on - strand, within CA264_09890at 2304.499 kb on - strand, within CA264_09890at 2304.622 kb on + strand, within CA264_09890at 2304.622 kb on + strand, within CA264_09890at 2304.623 kb on - strand, within CA264_09890at 2304.623 kb on - strand, within CA264_09890at 2304.626 kb on - strand, within CA264_09890at 2304.641 kb on - strand, within CA264_09890at 2304.641 kb on - strand, within CA264_09890at 2304.726 kb on + strand, within CA264_09890at 2304.759 kb on + strand, within CA264_09890at 2304.760 kb on - strand, within CA264_09890at 2304.796 kb on + strand, within CA264_09890at 2304.875 kb on + strandat 2304.875 kb on + strandat 2304.903 kb on + strandat 2305.117 kb on - strand, within CA264_09895at 2305.244 kb on + strand, within CA264_09895at 2305.332 kb on + strand, within CA264_09895at 2305.386 kb on + strand, within CA264_09895at 2305.432 kb on + strand, within CA264_09895at 2305.464 kb on + strand, within CA264_09895at 2305.476 kb on + strand, within CA264_09895at 2305.476 kb on + strand, within CA264_09895at 2305.477 kb on - strand, within CA264_09895at 2305.477 kb on - strand, within CA264_09895at 2305.518 kb on + strand, within CA264_09895at 2305.519 kb on - strand, within CA264_09895at 2305.530 kb on + strand, within CA264_09895at 2305.531 kb on - strand, within CA264_09895at 2305.552 kb on + strand, within CA264_09895at 2305.553 kb on - strand, within CA264_09895at 2305.553 kb on - strand, within CA264_09895at 2305.553 kb on - strand, within CA264_09895at 2305.553 kb on - strand, within CA264_09895at 2305.571 kb on + strand, within CA264_09895at 2305.572 kb on - strand, within CA264_09895at 2305.614 kb on + strand, within CA264_09895at 2305.615 kb on - strand, within CA264_09895at 2305.620 kb on + strand, within CA264_09895at 2305.620 kb on + strand, within CA264_09895at 2305.621 kb on - strand, within CA264_09895at 2305.674 kb on - strand, within CA264_09895at 2305.677 kb on - strand, within CA264_09895at 2305.734 kb on + strand, within CA264_09895at 2305.738 kb on + strand, within CA264_09895at 2305.738 kb on + strand, within CA264_09895at 2305.739 kb on - strand, within CA264_09895at 2305.739 kb on - strand, within CA264_09895at 2305.825 kb on + strand, within CA264_09895at 2305.833 kb on + strand, within CA264_09895at 2305.864 kb on - strand, within CA264_09895

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml
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2,303,534 + CA264_09885 0.68 -0.8
2,303,599 - CA264_09885 0.71 -0.1
2,303,601 + CA264_09885 0.71 -0.6
2,303,660 + CA264_09885 0.73 +1.2
2,303,661 - CA264_09885 0.73 +0.5
2,303,661 - CA264_09885 0.73 -1.5
2,303,830 + CA264_09885 0.79 +0.9
2,303,830 + CA264_09885 0.79 -0.1
2,303,831 - CA264_09885 0.79 -0.2
2,303,894 + CA264_09885 0.81 -0.2
2,303,894 + CA264_09885 0.81 +0.4
2,303,895 - CA264_09885 0.81 -0.5
2,303,947 + CA264_09885 0.83 -0.0
2,304,056 - CA264_09885 0.87 -1.0
2,304,066 + CA264_09885 0.87 -0.2
2,304,142 - CA264_09885 0.90 -0.2
2,304,294 - +0.8
2,304,294 - -0.6
2,304,297 + -0.7
2,304,297 + -0.2
2,304,297 + +1.3
2,304,298 - +0.2
2,304,298 - +0.6
2,304,298 - -0.6
2,304,298 - +1.5
2,304,299 + -0.0
2,304,300 - +0.2
2,304,302 + +0.4
2,304,302 + -0.3
2,304,303 - -0.8
2,304,332 - -0.2
2,304,372 + +0.1
2,304,373 - -0.3
2,304,373 - -0.3
2,304,373 - +0.6
2,304,382 + +1.5
2,304,382 + -0.0
2,304,382 + -1.0
2,304,382 + -0.5
2,304,383 - +0.2
2,304,383 - -0.2
2,304,385 + +0.1
2,304,386 - -0.4
2,304,404 - -0.6
2,304,416 + +1.3
2,304,422 - +1.0
2,304,426 + +0.5
2,304,426 + +0.3
2,304,426 + +0.3
2,304,426 + -0.7
2,304,426 + -0.3
2,304,427 - +0.4
2,304,427 - +0.7
2,304,427 - +1.3
2,304,470 - -1.0
2,304,496 + CA264_09890 0.13 -0.3
2,304,497 - CA264_09890 0.14 -0.6
2,304,499 - CA264_09890 0.14 -1.9
2,304,622 + CA264_09890 0.40 -0.5
2,304,622 + CA264_09890 0.40 -1.1
2,304,623 - CA264_09890 0.41 -0.3
2,304,623 - CA264_09890 0.41 -0.4
2,304,626 - CA264_09890 0.41 -0.5
2,304,641 - CA264_09890 0.45 +0.5
2,304,641 - CA264_09890 0.45 -1.6
2,304,726 + CA264_09890 0.63 -1.6
2,304,759 + CA264_09890 0.70 +0.4
2,304,760 - CA264_09890 0.70 -0.1
2,304,796 + CA264_09890 0.78 -1.1
2,304,875 + -1.0
2,304,875 + -0.2
2,304,903 + +0.2
2,305,117 - CA264_09895 0.15 -0.3
2,305,244 + CA264_09895 0.24 -0.4
2,305,332 + CA264_09895 0.30 -0.1
2,305,386 + CA264_09895 0.34 -1.4
2,305,432 + CA264_09895 0.37 -1.2
2,305,464 + CA264_09895 0.39 +0.1
2,305,476 + CA264_09895 0.40 +0.8
2,305,476 + CA264_09895 0.40 +0.0
2,305,477 - CA264_09895 0.40 -0.8
2,305,477 - CA264_09895 0.40 -0.6
2,305,518 + CA264_09895 0.43 +0.1
2,305,519 - CA264_09895 0.43 -0.5
2,305,530 + CA264_09895 0.44 -1.3
2,305,531 - CA264_09895 0.44 -0.7
2,305,552 + CA264_09895 0.45 -0.2
2,305,553 - CA264_09895 0.45 +1.9
2,305,553 - CA264_09895 0.45 +0.2
2,305,553 - CA264_09895 0.45 -0.2
2,305,553 - CA264_09895 0.45 -0.7
2,305,571 + CA264_09895 0.47 +2.0
2,305,572 - CA264_09895 0.47 -0.4
2,305,614 + CA264_09895 0.50 -0.1
2,305,615 - CA264_09895 0.50 -0.4
2,305,620 + CA264_09895 0.50 -1.8
2,305,620 + CA264_09895 0.50 -0.3
2,305,621 - CA264_09895 0.50 -0.1
2,305,674 - CA264_09895 0.54 +0.1
2,305,677 - CA264_09895 0.54 -0.7
2,305,734 + CA264_09895 0.58 -0.3
2,305,738 + CA264_09895 0.58 -0.0
2,305,738 + CA264_09895 0.58 -2.7
2,305,739 - CA264_09895 0.58 -1.1
2,305,739 - CA264_09895 0.58 -0.5
2,305,825 + CA264_09895 0.64 -0.4
2,305,833 + CA264_09895 0.65 -0.0
2,305,864 - CA264_09895 0.67 -0.2

Or see this region's nucleotide sequence