Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_02265

Experiment: m.b. benzoic 0.58 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_02260 and CA264_02265 overlap by 20 nucleotidesCA264_02265 and CA264_02270 are separated by 79 nucleotides CA264_02260: CA264_02260 - hypothetical protein, at 522,962 to 525,358 _02260 CA264_02265: CA264_02265 - phosphonate ABC transporter ATP-binding protein, at 525,339 to 526,058 _02265 CA264_02270: CA264_02270 - efflux transporter periplasmic adaptor subunit, at 526,138 to 527,388 _02270 Position (kb) 525 526 527Strain fitness (log2 ratio) -1 0 1at 524.355 kb on - strand, within CA264_02260at 524.443 kb on - strand, within CA264_02260at 524.446 kb on + strand, within CA264_02260at 524.446 kb on + strand, within CA264_02260at 524.446 kb on + strand, within CA264_02260at 524.447 kb on - strand, within CA264_02260at 524.499 kb on + strand, within CA264_02260at 524.499 kb on + strand, within CA264_02260at 524.500 kb on - strand, within CA264_02260at 524.500 kb on - strand, within CA264_02260at 524.500 kb on - strand, within CA264_02260at 524.524 kb on + strand, within CA264_02260at 524.524 kb on + strand, within CA264_02260at 524.525 kb on - strand, within CA264_02260at 524.650 kb on + strand, within CA264_02260at 524.695 kb on - strand, within CA264_02260at 524.695 kb on - strand, within CA264_02260at 524.695 kb on - strand, within CA264_02260at 524.695 kb on - strand, within CA264_02260at 524.701 kb on - strand, within CA264_02260at 524.923 kb on + strand, within CA264_02260at 525.107 kb on - strand, within CA264_02260at 525.167 kb on - strandat 525.167 kb on - strandat 525.205 kb on + strandat 525.240 kb on + strandat 525.240 kb on + strandat 525.240 kb on + strandat 525.241 kb on - strandat 525.241 kb on - strandat 525.241 kb on - strandat 525.241 kb on - strandat 525.246 kb on + strandat 525.246 kb on + strandat 525.247 kb on - strandat 525.247 kb on - strandat 525.248 kb on + strandat 525.248 kb on + strandat 525.248 kb on + strandat 525.248 kb on + strandat 525.248 kb on + strandat 525.249 kb on - strandat 525.251 kb on - strandat 525.303 kb on + strandat 525.305 kb on + strandat 525.305 kb on + strandat 525.306 kb on - strandat 525.306 kb on - strandat 525.306 kb on - strandat 525.306 kb on - strandat 525.340 kb on + strandat 525.345 kb on + strandat 525.553 kb on - strand, within CA264_02265at 525.554 kb on + strand, within CA264_02265at 525.703 kb on + strand, within CA264_02265at 525.747 kb on + strand, within CA264_02265at 525.764 kb on + strand, within CA264_02265at 525.905 kb on + strand, within CA264_02265at 525.957 kb on + strand, within CA264_02265at 525.958 kb on - strand, within CA264_02265at 526.010 kb on - strandat 526.039 kb on - strandat 526.042 kb on - strandat 526.071 kb on - strandat 526.077 kb on - strandat 526.095 kb on + strandat 526.105 kb on + strandat 526.105 kb on + strandat 526.106 kb on - strandat 526.140 kb on - strandat 526.192 kb on + strandat 526.192 kb on + strandat 526.233 kb on - strandat 526.329 kb on - strand, within CA264_02270at 526.329 kb on - strand, within CA264_02270at 526.384 kb on + strand, within CA264_02270at 526.541 kb on + strand, within CA264_02270at 526.556 kb on + strand, within CA264_02270at 526.556 kb on + strand, within CA264_02270at 526.604 kb on - strand, within CA264_02270at 526.687 kb on + strand, within CA264_02270at 526.691 kb on + strand, within CA264_02270at 526.691 kb on + strand, within CA264_02270at 526.691 kb on + strand, within CA264_02270at 526.692 kb on - strand, within CA264_02270at 526.757 kb on - strand, within CA264_02270at 526.798 kb on + strand, within CA264_02270at 526.798 kb on + strand, within CA264_02270at 526.835 kb on + strand, within CA264_02270at 526.841 kb on + strand, within CA264_02270at 526.842 kb on - strand, within CA264_02270at 526.842 kb on - strand, within CA264_02270at 526.913 kb on + strand, within CA264_02270at 526.938 kb on + strand, within CA264_02270at 526.940 kb on + strand, within CA264_02270at 526.940 kb on + strand, within CA264_02270at 526.940 kb on + strand, within CA264_02270at 526.941 kb on - strand, within CA264_02270at 526.941 kb on - strand, within CA264_02270at 526.941 kb on - strand, within CA264_02270at 527.027 kb on + strand, within CA264_02270at 527.028 kb on - strand, within CA264_02270

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml
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524,355 - CA264_02260 0.58 -0.1
524,443 - CA264_02260 0.62 +0.3
524,446 + CA264_02260 0.62 -0.4
524,446 + CA264_02260 0.62 +0.1
524,446 + CA264_02260 0.62 -0.5
524,447 - CA264_02260 0.62 -0.3
524,499 + CA264_02260 0.64 +0.5
524,499 + CA264_02260 0.64 +1.1
524,500 - CA264_02260 0.64 +0.5
524,500 - CA264_02260 0.64 -1.1
524,500 - CA264_02260 0.64 +0.8
524,524 + CA264_02260 0.65 +1.7
524,524 + CA264_02260 0.65 -0.2
524,525 - CA264_02260 0.65 -0.6
524,650 + CA264_02260 0.70 +0.0
524,695 - CA264_02260 0.72 -0.3
524,695 - CA264_02260 0.72 -0.3
524,695 - CA264_02260 0.72 -1.0
524,695 - CA264_02260 0.72 -0.4
524,701 - CA264_02260 0.73 +1.0
524,923 + CA264_02260 0.82 -0.6
525,107 - CA264_02260 0.89 -1.1
525,167 - -0.2
525,167 - -0.4
525,205 + -0.4
525,240 + -0.2
525,240 + +1.1
525,240 + +0.2
525,241 - +0.3
525,241 - -0.3
525,241 - -0.2
525,241 - -0.2
525,246 + +0.8
525,246 + -0.3
525,247 - +0.6
525,247 - -0.5
525,248 + -0.0
525,248 + -0.7
525,248 + +0.3
525,248 + -0.4
525,248 + -0.7
525,249 - +0.1
525,251 - +0.4
525,303 + -0.3
525,305 + -0.5
525,305 + +0.2
525,306 - -0.7
525,306 - +0.1
525,306 - +0.4
525,306 - -0.2
525,340 + -1.5
525,345 + -0.3
525,553 - CA264_02265 0.30 -1.3
525,554 + CA264_02265 0.30 +1.0
525,703 + CA264_02265 0.51 -0.2
525,747 + CA264_02265 0.57 +0.1
525,764 + CA264_02265 0.59 -0.7
525,905 + CA264_02265 0.79 -0.9
525,957 + CA264_02265 0.86 -0.6
525,958 - CA264_02265 0.86 -0.6
526,010 - -1.1
526,039 - +0.4
526,042 - -0.3
526,071 - +0.7
526,077 - -0.3
526,095 + +0.3
526,105 + +0.3
526,105 + -0.3
526,106 - +0.9
526,140 - +0.1
526,192 + +1.3
526,192 + -1.7
526,233 - -0.7
526,329 - CA264_02270 0.15 -0.1
526,329 - CA264_02270 0.15 -0.2
526,384 + CA264_02270 0.20 -0.2
526,541 + CA264_02270 0.32 -1.3
526,556 + CA264_02270 0.33 -0.1
526,556 + CA264_02270 0.33 +0.0
526,604 - CA264_02270 0.37 -1.5
526,687 + CA264_02270 0.44 +0.6
526,691 + CA264_02270 0.44 +0.7
526,691 + CA264_02270 0.44 -0.1
526,691 + CA264_02270 0.44 -0.2
526,692 - CA264_02270 0.44 -1.6
526,757 - CA264_02270 0.49 -0.7
526,798 + CA264_02270 0.53 +0.2
526,798 + CA264_02270 0.53 -0.3
526,835 + CA264_02270 0.56 +0.6
526,841 + CA264_02270 0.56 +0.1
526,842 - CA264_02270 0.56 -0.8
526,842 - CA264_02270 0.56 -1.3
526,913 + CA264_02270 0.62 +0.1
526,938 + CA264_02270 0.64 -0.6
526,940 + CA264_02270 0.64 -0.4
526,940 + CA264_02270 0.64 -0.4
526,940 + CA264_02270 0.64 -0.1
526,941 - CA264_02270 0.64 +0.1
526,941 - CA264_02270 0.64 -0.5
526,941 - CA264_02270 0.64 +0.5
527,027 + CA264_02270 0.71 +0.9
527,028 - CA264_02270 0.71 -0.5

Or see this region's nucleotide sequence