Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01715 and CA264_01720 are separated by 93 nucleotides CA264_01720 and CA264_01725 are separated by 2 nucleotides CA264_01725 and CA264_01730 are separated by 147 nucleotides
CA264_01715: CA264_01715 - 4Fe-4S ferredoxin, at 401,324 to 401,926
_01715
CA264_01720: CA264_01720 - NADH-ubiquinone/plastoquinone oxidoreductase chain 6, at 402,020 to 402,547
_01720
CA264_01725: CA264_01725 - NADH-quinone oxidoreductase subunit K, at 402,550 to 402,864
_01725
CA264_01730: CA264_01730 - NADH-quinone oxidoreductase subunit L, at 403,012 to 405,156
_01730
Position (kb) 402
403 Strain fitness (log2 ratio) -2
-1
0
1 at 401.622 kb on + strand, within CA264_01715 at 401.676 kb on - strand, within CA264_01715 at 401.693 kb on - strand, within CA264_01715 at 402.030 kb on + strand at 402.030 kb on + strand at 402.031 kb on - strand at 402.031 kb on - strand at 402.091 kb on - strand, within CA264_01720 at 402.241 kb on + strand, within CA264_01720 at 402.289 kb on - strand, within CA264_01720 at 402.298 kb on - strand, within CA264_01720 at 402.323 kb on - strand, within CA264_01720 at 402.325 kb on - strand, within CA264_01720 at 402.341 kb on + strand, within CA264_01720 at 402.343 kb on + strand, within CA264_01720 at 402.343 kb on + strand, within CA264_01720 at 402.343 kb on + strand, within CA264_01720 at 402.344 kb on - strand, within CA264_01720 at 402.346 kb on + strand, within CA264_01720 at 402.346 kb on + strand, within CA264_01720 at 402.352 kb on + strand, within CA264_01720 at 402.353 kb on - strand, within CA264_01720 at 402.462 kb on + strand, within CA264_01720 at 402.463 kb on - strand, within CA264_01720 at 402.519 kb on - strand at 402.519 kb on - strand at 402.520 kb on + strand at 402.520 kb on + strand at 402.521 kb on - strand at 402.574 kb on - strand at 402.579 kb on - strand at 402.585 kb on - strand, within CA264_01725 at 402.815 kb on - strand, within CA264_01725 at 402.862 kb on + strand at 402.862 kb on + strand at 402.880 kb on + strand at 402.880 kb on + strand at 402.880 kb on + strand at 402.880 kb on + strand at 402.897 kb on + strand at 402.897 kb on + strand at 402.897 kb on + strand at 402.901 kb on + strand at 402.917 kb on + strand at 402.917 kb on + strand at 402.917 kb on + strand at 402.918 kb on - strand at 402.918 kb on - strand at 402.923 kb on + strand at 402.953 kb on + strand at 402.972 kb on - strand at 403.002 kb on - strand at 403.002 kb on - strand at 403.084 kb on + strand at 403.128 kb on + strand at 403.129 kb on - strand at 403.152 kb on + strand at 403.199 kb on - strand at 403.241 kb on + strand, within CA264_01730 at 403.364 kb on - strand, within CA264_01730 at 403.402 kb on - strand, within CA264_01730 at 403.410 kb on - strand, within CA264_01730 at 403.544 kb on + strand, within CA264_01730 at 403.563 kb on - strand, within CA264_01730 at 403.592 kb on - strand, within CA264_01730 at 403.626 kb on - strand, within CA264_01730 at 403.669 kb on - strand, within CA264_01730 at 403.707 kb on - strand, within CA264_01730 at 403.713 kb on - strand, within CA264_01730 at 403.753 kb on - strand, within CA264_01730 at 403.763 kb on + strand, within CA264_01730 at 403.842 kb on - strand, within CA264_01730
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 401,622 + CA264_01715 0.49 +0.2 401,676 - CA264_01715 0.58 +0.2 401,693 - CA264_01715 0.61 -1.8 402,030 + +0.0 402,030 + +0.6 402,031 - +0.4 402,031 - +0.3 402,091 - CA264_01720 0.13 +0.2 402,241 + CA264_01720 0.42 -0.3 402,289 - CA264_01720 0.51 -0.1 402,298 - CA264_01720 0.53 +0.8 402,323 - CA264_01720 0.57 -0.2 402,325 - CA264_01720 0.58 -0.3 402,341 + CA264_01720 0.61 -0.7 402,343 + CA264_01720 0.61 +0.2 402,343 + CA264_01720 0.61 +0.5 402,343 + CA264_01720 0.61 -0.2 402,344 - CA264_01720 0.61 +1.0 402,346 + CA264_01720 0.62 -1.0 402,346 + CA264_01720 0.62 -0.1 402,352 + CA264_01720 0.63 -0.3 402,353 - CA264_01720 0.63 -1.1 402,462 + CA264_01720 0.84 -0.5 402,463 - CA264_01720 0.84 -0.4 402,519 - -0.2 402,519 - -0.5 402,520 + +0.7 402,520 + -0.5 402,521 - -0.0 402,574 - -0.1 402,579 - -1.5 402,585 - CA264_01725 0.11 -0.1 402,815 - CA264_01725 0.84 +0.5 402,862 + -0.8 402,862 + -1.0 402,880 + +0.0 402,880 + +0.1 402,880 + +0.3 402,880 + -0.4 402,897 + +0.3 402,897 + -0.6 402,897 + +0.1 402,901 + -0.0 402,917 + +1.3 402,917 + -0.4 402,917 + +0.2 402,918 - -0.1 402,918 - -0.2 402,923 + -0.3 402,953 + -0.3 402,972 - +0.1 403,002 - -0.7 403,002 - -0.2 403,084 + -0.1 403,128 + -0.1 403,129 - -0.9 403,152 + -1.1 403,199 - +0.1 403,241 + CA264_01730 0.11 -0.5 403,364 - CA264_01730 0.16 +0.5 403,402 - CA264_01730 0.18 -0.4 403,410 - CA264_01730 0.19 -0.2 403,544 + CA264_01730 0.25 -0.4 403,563 - CA264_01730 0.26 +0.7 403,592 - CA264_01730 0.27 -1.6 403,626 - CA264_01730 0.29 -0.5 403,669 - CA264_01730 0.31 -0.5 403,707 - CA264_01730 0.32 -0.0 403,713 - CA264_01730 0.33 -0.7 403,753 - CA264_01730 0.35 -0.7 403,763 + CA264_01730 0.35 -0.2 403,842 - CA264_01730 0.39 +0.6
Or see this region's nucleotide sequence