Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00400 and CA264_00405 are separated by 29 nucleotides CA264_00405 and CA264_00410 are separated by 158 nucleotides CA264_00410 and CA264_00415 are separated by 99 nucleotides
CA264_00400: CA264_00400 - alkyl hydroperoxide reductase, at 88,036 to 88,674
_00400
CA264_00405: CA264_00405 - transcriptional repressor, at 88,704 to 89,168
_00405
CA264_00410: CA264_00410 - enoyl-CoA hydratase, at 89,327 to 90,100
_00410
CA264_00415: CA264_00415 - aspartate kinase, at 90,200 to 91,474
_00415
Position (kb) 89
90
91 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 88.348 kb on - strand, within CA264_00400 at 88.376 kb on + strand, within CA264_00400 at 88.551 kb on - strand, within CA264_00400 at 88.663 kb on + strand at 88.663 kb on + strand at 88.663 kb on + strand at 88.722 kb on - strand at 88.728 kb on + strand at 88.729 kb on - strand at 89.036 kb on - strand, within CA264_00405 at 89.114 kb on + strand, within CA264_00405 at 89.142 kb on + strand at 89.198 kb on - strand at 89.224 kb on + strand at 89.229 kb on + strand at 89.230 kb on - strand at 89.263 kb on + strand at 89.263 kb on + strand at 89.264 kb on - strand at 89.265 kb on + strand at 89.288 kb on + strand at 89.289 kb on - strand at 89.309 kb on + strand at 89.310 kb on - strand at 89.321 kb on - strand at 89.410 kb on - strand, within CA264_00410 at 89.547 kb on + strand, within CA264_00410 at 89.547 kb on + strand, within CA264_00410 at 89.609 kb on - strand, within CA264_00410 at 89.609 kb on - strand, within CA264_00410 at 89.705 kb on - strand, within CA264_00410 at 89.705 kb on - strand, within CA264_00410 at 89.705 kb on - strand, within CA264_00410 at 89.705 kb on - strand, within CA264_00410 at 89.821 kb on + strand, within CA264_00410 at 89.821 kb on + strand, within CA264_00410 at 89.822 kb on - strand, within CA264_00410 at 90.089 kb on + strand at 90.090 kb on - strand at 90.103 kb on + strand at 90.104 kb on - strand at 90.104 kb on - strand at 90.104 kb on - strand at 90.185 kb on + strand at 90.185 kb on + strand at 90.307 kb on - strand at 90.327 kb on + strand at 90.328 kb on - strand, within CA264_00415
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 88,348 - CA264_00400 0.49 -0.9 88,376 + CA264_00400 0.53 -1.7 88,551 - CA264_00400 0.81 +1.5 88,663 + -0.7 88,663 + -1.4 88,663 + +0.4 88,722 - +0.9 88,728 + -1.2 88,729 - +0.6 89,036 - CA264_00405 0.71 -0.3 89,114 + CA264_00405 0.88 +0.2 89,142 + +0.0 89,198 - -0.3 89,224 + +1.2 89,229 + -0.4 89,230 - +0.2 89,263 + +0.0 89,263 + -0.2 89,264 - -0.2 89,265 + -0.3 89,288 + -0.2 89,289 - -0.1 89,309 + -0.2 89,310 - +1.3 89,321 - +0.5 89,410 - CA264_00410 0.11 +0.0 89,547 + CA264_00410 0.28 +0.2 89,547 + CA264_00410 0.28 -0.8 89,609 - CA264_00410 0.36 +0.1 89,609 - CA264_00410 0.36 +1.5 89,705 - CA264_00410 0.49 +0.4 89,705 - CA264_00410 0.49 -0.4 89,705 - CA264_00410 0.49 +0.3 89,705 - CA264_00410 0.49 -0.4 89,821 + CA264_00410 0.64 -0.5 89,821 + CA264_00410 0.64 +0.5 89,822 - CA264_00410 0.64 -0.1 90,089 + -0.2 90,090 - +1.5 90,103 + +0.1 90,104 - -0.6 90,104 - +0.5 90,104 - -0.2 90,185 + +0.0 90,185 + -0.1 90,307 - -2.0 90,327 + -4.0 90,328 - CA264_00415 0.10 -2.6
Or see this region's nucleotide sequence