Strain Fitness in Pseudomonas simiae WCS417 around PS417_20250

Experiment: Chloramphenicol 0.0075 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0075 mg/ml
4,396,997	+		PS417_20240	0.83	-0.3
4,396,998	-		PS417_20240	0.83	-0.4
4,397,119	+				+0.3
4,397,120	-				-0.1
4,397,120	-				-0.5
4,397,120	-				+0.4
4,397,411	+		PS417_20245	0.31	-0.4
4,397,591	-		PS417_20245	0.52	-0.4
4,397,591	-		PS417_20245	0.52	-0.1
4,397,912	+				-0.1
4,397,912	+				+0.3
4,397,913	-				-0.0
4,397,913	-				-0.7
4,398,070	+		PS417_20250	0.20	-0.8
4,398,116	+		PS417_20250	0.32	-0.8
4,398,116	+		PS417_20250	0.32	-0.1
4,398,117	-		PS417_20250	0.32	+0.0
4,398,117	-		PS417_20250	0.32	-0.9
4,398,369	-				-0.0
4,398,369	-				-0.6
4,398,498	+				-0.2
4,398,544	-		PS417_20255	0.14	+0.8
4,398,564	-		PS417_20255	0.16	-0.0
4,398,746	+		PS417_20255	0.39	+0.0
4,398,771	+		PS417_20255	0.42	+0.1
4,398,948	-		PS417_20255	0.63	-0.1
4,399,092	+		PS417_20255	0.81	+0.6
4,399,092	+		PS417_20255	0.81	+0.2
4,399,093	-		PS417_20255	0.81	+1.0
4,399,093	-		PS417_20255	0.81	+0.4
4,399,303	+				-0.6
4,399,304	-				+0.8