Strain Fitness in Pseudomonas simiae WCS417 around PS417_12740
Experiment: Chloramphenicol 0.0075 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.0075 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,776,987 | + | -0.2 | |||
2,777,151 | + | +0.2 | |||
2,777,210 | + | -0.1 | |||
2,777,211 | - | +0.1 | |||
2,777,362 | - | PS417_12735 | 0.28 | +0.5 | |
2,777,691 | + | +0.1 | |||
2,777,695 | + | +0.0 | |||
2,777,722 | + | +0.3 | |||
2,777,722 | + | +1.6 | |||
2,777,723 | - | +0.1 | |||
2,777,755 | + | -0.0 | |||
2,777,851 | + | -0.7 | |||
2,777,852 | - | -0.2 | |||
2,777,866 | - | +0.2 | |||
2,777,876 | + | -0.2 | |||
2,777,877 | - | +1.0 | |||
2,777,880 | + | -0.6 | |||
2,778,200 | + | PS417_12740 | 0.19 | -0.1 | |
2,778,341 | + | PS417_12740 | 0.29 | -0.9 | |
2,778,438 | - | PS417_12740 | 0.37 | -0.8 | |
2,778,452 | - | PS417_12740 | 0.38 | -1.0 | |
2,778,452 | - | PS417_12740 | 0.38 | -0.5 | |
2,779,640 | - | PS417_12745 | 0.12 | -1.4 | |
2,779,997 | - | PS417_12745 | 0.24 | -0.9 |
Or see this region's nucleotide sequence