Strain Fitness in Pseudomonas simiae WCS417 around PS417_08015

Experiment: Chloramphenicol 0.0075 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0075 mg/ml
1,752,799	+		PS417_08010	0.45	+1.7
1,752,874	+		PS417_08010	0.51	+0.8
1,752,874	+		PS417_08010	0.51	-0.7
1,752,874	+		PS417_08010	0.51	+0.2
1,752,874	+		PS417_08010	0.51	+1.2
1,752,874	+		PS417_08010	0.51	-1.3
1,752,875	-		PS417_08010	0.51	-0.8
1,752,875	-		PS417_08010	0.51	-0.4
1,752,875	-		PS417_08010	0.51	-0.2
1,752,875	-		PS417_08010	0.51	+0.3
1,752,878	+		PS417_08010	0.51	-0.1
1,752,878	+		PS417_08010	0.51	+0.3
1,752,878	+		PS417_08010	0.51	+1.7
1,752,878	+		PS417_08010	0.51	+0.3
1,752,878	+		PS417_08010	0.51	+0.1
1,752,878	+		PS417_08010	0.51	-0.7
1,752,878	+		PS417_08010	0.51	-0.1
1,752,878	+		PS417_08010	0.51	+0.9
1,752,879	-		PS417_08010	0.51	-0.0
1,752,879	-		PS417_08010	0.51	+0.4
1,752,879	-		PS417_08010	0.51	-0.0
1,752,916	+		PS417_08010	0.54	+0.6
1,752,916	+		PS417_08010	0.54	+1.2
1,752,916	+		PS417_08010	0.54	-0.2
1,752,916	+		PS417_08010	0.54	-1.2
1,752,916	+		PS417_08010	0.54	-0.1
1,752,916	+		PS417_08010	0.54	-0.0
1,752,916	+		PS417_08010	0.54	-0.0
1,752,916	+		PS417_08010	0.54	-0.5
1,752,917	-		PS417_08010	0.54	+0.2
1,752,917	-		PS417_08010	0.54	+1.6
1,752,917	-		PS417_08010	0.54	+0.6
1,752,917	-		PS417_08010	0.54	-1.0
1,752,917	-		PS417_08010	0.54	+0.5
1,752,917	-		PS417_08010	0.54	-0.1
1,752,917	-		PS417_08010	0.54	+0.9
1,753,233	+		PS417_08010	0.80	-1.5
1,753,234	-		PS417_08010	0.80	-0.3
1,753,258	-		PS417_08010	0.82	-0.4
1,753,267	-		PS417_08010	0.83	+0.1
1,753,267	-		PS417_08010	0.83	+0.1
1,753,267	-				+3.3
1,753,267	-		PS417_08010	0.83	-0.7
1,753,267	-		PS417_08010	0.83	-0.1
1,753,298	+		PS417_08010	0.85	+0.7
1,753,299	-		PS417_08010	0.85	-0.1
1,753,368	+				-0.3
1,753,426	-				-1.6
1,753,428	+				+0.3
1,753,428	+				-2.0
1,753,429	-				-1.1
1,753,429	-				+0.2
1,753,457	+				-0.6
1,753,457	+				+0.2
1,753,565	+				-0.1
1,753,599	-				+0.4
1,753,707	+				-1.1
1,753,708	-				-0.9
1,753,763	+				-0.0
1,753,763	+				-1.0
1,753,763	+				+0.3
1,753,764	-				-1.3
1,753,764	-				+0.3
1,753,764	-				+0.5
1,753,767	+				-0.0
1,753,768	-				+1.6
1,753,783	-				-0.9
1,753,783	-				-0.5
1,753,899	+		PS417_08015	0.19	-0.3
1,753,899	+		PS417_08015	0.19	-1.2
1,753,900	-		PS417_08015	0.19	-1.5
1,754,008	+		PS417_08015	0.36	+0.2
1,754,011	+		PS417_08015	0.37	-0.9
1,754,012	-		PS417_08015	0.37	+0.5
1,754,089	-		PS417_08015	0.49	-0.1
1,754,134	+		PS417_08015	0.56	-1.2
1,754,134	+		PS417_08015	0.56	-0.6
1,754,225	-		PS417_08015	0.71	-1.0
1,754,247	-		PS417_08015	0.74	-0.4
1,754,777	+		PS417_08020	0.41	-1.4
1,754,778	-		PS417_08020	0.41	+0.9
1,754,795	-		PS417_08020	0.43	+1.8
1,754,795	-		PS417_08020	0.43	+0.7
1,754,935	+		PS417_08020	0.59	-0.3
1,754,936	-		PS417_08020	0.59	-0.0
1,754,984	+		PS417_08020	0.64	+1.3
1,754,984	+		PS417_08020	0.64	-1.6
1,754,985	-		PS417_08020	0.64	+0.1
1,755,112	+		PS417_08020	0.78	-1.0
1,755,115	+		PS417_08020	0.79	+1.1
1,755,198	+		PS417_08020	0.88	+0.7
1,755,198	+		PS417_08020	0.88	+0.3
1,755,199	-		PS417_08020	0.88	-0.9
1,755,199	-		PS417_08020	0.88	+0.2
1,755,199	-		PS417_08020	0.88	+0.1
1,755,199	-		PS417_08020	0.88	-0.5
1,755,199	-		PS417_08020	0.88	+0.2
1,755,221	+				-0.1