Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4466 and Echvi_4467 are separated by 50 nucleotides Echvi_4467 and Echvi_4468 are separated by 135 nucleotides Echvi_4468 and Echvi_4469 overlap by 4 nucleotides Echvi_4469 and Echvi_4470 are separated by 15 nucleotides
Echvi_4466: Echvi_4466 - Co/Zn/Cd efflux system component, at 5,340,967 to 5,341,764
_4466
Echvi_4467: Echvi_4467 - Uncharacterized conserved protein, at 5,341,815 to 5,342,201
_4467
Echvi_4468: Echvi_4468 - heavy metal translocating P-type ATPase, at 5,342,337 to 5,344,838
_4468
Echvi_4469: Echvi_4469 - Uncharacterized membrane protein, at 5,344,835 to 5,345,263
_4469
Echvi_4470: Echvi_4470 - Predicted membrane protein, at 5,345,279 to 5,346,169
_4470
Position (kb) 5342
5343
5344
5345 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 5341.388 kb on - strand, within Echvi_4466 at 5341.404 kb on + strand, within Echvi_4466 at 5341.405 kb on - strand, within Echvi_4466 at 5341.431 kb on + strand, within Echvi_4466 at 5341.462 kb on + strand, within Echvi_4466 at 5341.462 kb on + strand, within Echvi_4466 at 5341.521 kb on + strand, within Echvi_4466 at 5341.530 kb on + strand, within Echvi_4466 at 5341.531 kb on - strand, within Echvi_4466 at 5341.531 kb on - strand, within Echvi_4466 at 5341.533 kb on + strand, within Echvi_4466 at 5341.533 kb on + strand, within Echvi_4466 at 5341.534 kb on - strand, within Echvi_4466 at 5341.540 kb on + strand, within Echvi_4466 at 5341.541 kb on - strand, within Echvi_4466 at 5341.541 kb on - strand, within Echvi_4466 at 5341.594 kb on + strand, within Echvi_4466 at 5341.597 kb on - strand, within Echvi_4466 at 5341.631 kb on + strand, within Echvi_4466 at 5341.631 kb on + strand, within Echvi_4466 at 5341.631 kb on + strand, within Echvi_4466 at 5341.631 kb on + strand, within Echvi_4466 at 5341.651 kb on - strand, within Echvi_4466 at 5341.651 kb on - strand, within Echvi_4466 at 5341.683 kb on + strand, within Echvi_4466 at 5341.767 kb on + strand at 5341.768 kb on - strand at 5341.803 kb on - strand at 5341.819 kb on - strand at 5341.880 kb on + strand, within Echvi_4467 at 5341.881 kb on - strand, within Echvi_4467 at 5341.898 kb on + strand, within Echvi_4467 at 5341.898 kb on + strand, within Echvi_4467 at 5341.898 kb on + strand, within Echvi_4467 at 5341.899 kb on - strand, within Echvi_4467 at 5341.924 kb on - strand, within Echvi_4467 at 5341.924 kb on - strand, within Echvi_4467 at 5341.956 kb on + strand, within Echvi_4467 at 5341.956 kb on + strand, within Echvi_4467 at 5341.956 kb on + strand, within Echvi_4467 at 5341.956 kb on + strand, within Echvi_4467 at 5341.957 kb on - strand, within Echvi_4467 at 5341.986 kb on - strand, within Echvi_4467 at 5342.024 kb on + strand, within Echvi_4467 at 5342.024 kb on + strand, within Echvi_4467 at 5342.024 kb on + strand, within Echvi_4467 at 5342.024 kb on + strand, within Echvi_4467 at 5342.089 kb on - strand, within Echvi_4467 at 5342.102 kb on + strand, within Echvi_4467 at 5342.168 kb on + strand at 5342.169 kb on - strand at 5342.194 kb on + strand at 5342.194 kb on + strand at 5342.194 kb on + strand at 5342.195 kb on - strand at 5342.195 kb on - strand at 5342.235 kb on + strand at 5342.238 kb on - strand at 5342.238 kb on - strand at 5342.266 kb on + strand at 5342.267 kb on - strand at 5342.272 kb on + strand at 5342.314 kb on + strand at 5342.314 kb on + strand at 5342.314 kb on + strand at 5342.347 kb on + strand at 5342.373 kb on + strand at 5342.374 kb on - strand at 5342.376 kb on + strand at 5342.376 kb on + strand at 5342.377 kb on - strand at 5342.380 kb on - strand at 5342.388 kb on - strand at 5342.406 kb on + strand at 5342.418 kb on + strand at 5342.430 kb on - strand at 5342.456 kb on + strand at 5342.475 kb on + strand at 5342.499 kb on - strand at 5342.504 kb on + strand at 5342.624 kb on + strand, within Echvi_4468 at 5342.624 kb on + strand, within Echvi_4468 at 5342.627 kb on + strand, within Echvi_4468 at 5342.652 kb on + strand, within Echvi_4468 at 5342.652 kb on + strand, within Echvi_4468 at 5342.813 kb on + strand, within Echvi_4468 at 5342.855 kb on + strand, within Echvi_4468 at 5342.900 kb on - strand, within Echvi_4468 at 5342.931 kb on - strand, within Echvi_4468 at 5342.984 kb on + strand, within Echvi_4468 at 5342.984 kb on + strand, within Echvi_4468 at 5342.984 kb on + strand, within Echvi_4468 at 5343.025 kb on + strand, within Echvi_4468 at 5343.025 kb on + strand, within Echvi_4468 at 5343.025 kb on + strand, within Echvi_4468 at 5343.026 kb on - strand, within Echvi_4468 at 5343.028 kb on - strand, within Echvi_4468 at 5343.028 kb on - strand, within Echvi_4468 at 5343.047 kb on + strand, within Echvi_4468 at 5343.053 kb on + strand, within Echvi_4468 at 5343.053 kb on + strand, within Echvi_4468 at 5343.062 kb on + strand, within Echvi_4468 at 5343.177 kb on + strand, within Echvi_4468 at 5343.177 kb on + strand, within Echvi_4468 at 5343.177 kb on + strand, within Echvi_4468 at 5343.207 kb on + strand, within Echvi_4468 at 5343.216 kb on + strand, within Echvi_4468 at 5343.216 kb on + strand, within Echvi_4468 at 5343.217 kb on - strand, within Echvi_4468 at 5343.225 kb on + strand, within Echvi_4468 at 5343.226 kb on - strand, within Echvi_4468 at 5343.255 kb on + strand, within Echvi_4468 at 5343.326 kb on + strand, within Echvi_4468 at 5343.326 kb on + strand, within Echvi_4468 at 5343.364 kb on - strand, within Echvi_4468 at 5343.417 kb on + strand, within Echvi_4468 at 5343.418 kb on - strand, within Echvi_4468 at 5343.434 kb on - strand, within Echvi_4468 at 5343.549 kb on - strand, within Echvi_4468 at 5343.615 kb on + strand, within Echvi_4468 at 5343.641 kb on + strand, within Echvi_4468 at 5343.654 kb on + strand, within Echvi_4468 at 5343.654 kb on + strand, within Echvi_4468 at 5343.654 kb on + strand, within Echvi_4468 at 5343.655 kb on - strand, within Echvi_4468 at 5343.655 kb on - strand, within Echvi_4468 at 5343.655 kb on - strand, within Echvi_4468 at 5343.799 kb on - strand, within Echvi_4468 at 5343.887 kb on + strand, within Echvi_4468 at 5343.887 kb on + strand, within Echvi_4468 at 5343.914 kb on + strand, within Echvi_4468 at 5343.968 kb on - strand, within Echvi_4468 at 5344.142 kb on - strand, within Echvi_4468 at 5344.154 kb on - strand, within Echvi_4468 at 5344.190 kb on + strand, within Echvi_4468 at 5344.192 kb on + strand, within Echvi_4468 at 5344.192 kb on + strand, within Echvi_4468 at 5344.193 kb on - strand, within Echvi_4468 at 5344.215 kb on + strand, within Echvi_4468 at 5344.320 kb on - strand, within Echvi_4468 at 5344.323 kb on - strand, within Echvi_4468 at 5344.360 kb on - strand, within Echvi_4468 at 5344.403 kb on + strand, within Echvi_4468 at 5344.465 kb on + strand, within Echvi_4468 at 5344.466 kb on - strand, within Echvi_4468 at 5344.466 kb on - strand, within Echvi_4468 at 5344.494 kb on + strand, within Echvi_4468 at 5344.508 kb on + strand, within Echvi_4468 at 5344.509 kb on - strand, within Echvi_4468 at 5344.511 kb on + strand, within Echvi_4468 at 5344.575 kb on + strand, within Echvi_4468 at 5344.576 kb on - strand, within Echvi_4468 at 5344.589 kb on + strand at 5344.590 kb on - strand at 5344.650 kb on + strand at 5344.650 kb on + strand at 5344.650 kb on + strand at 5344.652 kb on + strand at 5344.683 kb on + strand at 5344.716 kb on + strand at 5344.717 kb on - strand at 5344.718 kb on + strand at 5344.718 kb on + strand at 5344.889 kb on + strand, within Echvi_4469 at 5344.889 kb on + strand, within Echvi_4469 at 5344.889 kb on + strand, within Echvi_4469 at 5344.894 kb on + strand, within Echvi_4469 at 5344.926 kb on + strand, within Echvi_4469 at 5344.926 kb on + strand, within Echvi_4469 at 5344.926 kb on + strand, within Echvi_4469 at 5344.926 kb on + strand, within Echvi_4469 at 5344.926 kb on + strand, within Echvi_4469 at 5344.926 kb on + strand, within Echvi_4469 at 5344.926 kb on + strand, within Echvi_4469 at 5344.926 kb on + strand, within Echvi_4469 at 5344.926 kb on + strand, within Echvi_4469 at 5344.927 kb on - strand, within Echvi_4469 at 5344.927 kb on - strand, within Echvi_4469 at 5344.952 kb on + strand, within Echvi_4469 at 5344.973 kb on - strand, within Echvi_4469 at 5344.975 kb on + strand, within Echvi_4469 at 5345.027 kb on - strand, within Echvi_4469 at 5345.063 kb on - strand, within Echvi_4469 at 5345.110 kb on + strand, within Echvi_4469 at 5345.148 kb on + strand, within Echvi_4469 at 5345.148 kb on + strand, within Echvi_4469 at 5345.149 kb on - strand, within Echvi_4469 at 5345.149 kb on - strand, within Echvi_4469 at 5345.149 kb on - strand, within Echvi_4469 at 5345.149 kb on - strand, within Echvi_4469 at 5345.149 kb on - strand, within Echvi_4469 at 5345.149 kb on - strand, within Echvi_4469 at 5345.210 kb on + strand, within Echvi_4469 at 5345.225 kb on + strand at 5345.244 kb on - strand at 5345.283 kb on - strand at 5345.289 kb on + strand at 5345.292 kb on + strand at 5345.292 kb on + strand at 5345.293 kb on - strand at 5345.447 kb on - strand, within Echvi_4470 at 5345.447 kb on - strand, within Echvi_4470 at 5345.468 kb on - strand, within Echvi_4470 at 5345.493 kb on + strand, within Echvi_4470 at 5345.524 kb on + strand, within Echvi_4470 at 5345.525 kb on - strand, within Echvi_4470 at 5345.618 kb on + strand, within Echvi_4470 at 5345.619 kb on - strand, within Echvi_4470 at 5345.714 kb on + strand, within Echvi_4470 at 5345.764 kb on + strand, within Echvi_4470 at 5345.764 kb on + strand, within Echvi_4470 at 5345.814 kb on + strand, within Echvi_4470
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 5,341,388 - Echvi_4466 0.53 -1.6 5,341,404 + Echvi_4466 0.55 +1.0 5,341,405 - Echvi_4466 0.55 -0.8 5,341,431 + Echvi_4466 0.58 -0.1 5,341,462 + Echvi_4466 0.62 +1.1 5,341,462 + Echvi_4466 0.62 +0.6 5,341,521 + Echvi_4466 0.69 +1.3 5,341,530 + Echvi_4466 0.71 +1.1 5,341,531 - Echvi_4466 0.71 -2.7 5,341,531 - Echvi_4466 0.71 -2.5 5,341,533 + Echvi_4466 0.71 +1.9 5,341,533 + Echvi_4466 0.71 -0.2 5,341,534 - Echvi_4466 0.71 -0.2 5,341,540 + Echvi_4466 0.72 +0.8 5,341,541 - Echvi_4466 0.72 -2.5 5,341,541 - Echvi_4466 0.72 -0.8 5,341,594 + Echvi_4466 0.79 -1.6 5,341,597 - Echvi_4466 0.79 -0.5 5,341,631 + Echvi_4466 0.83 -0.3 5,341,631 + Echvi_4466 0.83 +0.1 5,341,631 + Echvi_4466 0.83 -0.3 5,341,631 + Echvi_4466 0.83 -1.3 5,341,651 - Echvi_4466 0.86 -1.8 5,341,651 - Echvi_4466 0.86 +1.1 5,341,683 + Echvi_4466 0.90 -0.2 5,341,767 + -0.8 5,341,768 - -1.3 5,341,803 - -0.5 5,341,819 - -1.4 5,341,880 + Echvi_4467 0.17 +1.7 5,341,881 - Echvi_4467 0.17 -1.2 5,341,898 + Echvi_4467 0.21 -0.6 5,341,898 + Echvi_4467 0.21 -3.2 5,341,898 + Echvi_4467 0.21 +0.2 5,341,899 - Echvi_4467 0.22 -0.9 5,341,924 - Echvi_4467 0.28 -1.2 5,341,924 - Echvi_4467 0.28 -0.9 5,341,956 + Echvi_4467 0.36 -0.8 5,341,956 + Echvi_4467 0.36 -0.1 5,341,956 + Echvi_4467 0.36 -0.5 5,341,956 + Echvi_4467 0.36 +0.1 5,341,957 - Echvi_4467 0.37 -1.5 5,341,986 - Echvi_4467 0.44 -3.1 5,342,024 + Echvi_4467 0.54 -1.7 5,342,024 + Echvi_4467 0.54 -0.3 5,342,024 + Echvi_4467 0.54 -0.1 5,342,024 + Echvi_4467 0.54 +1.0 5,342,089 - Echvi_4467 0.71 -2.6 5,342,102 + Echvi_4467 0.74 +1.1 5,342,168 + +0.9 5,342,169 - -2.0 5,342,194 + -0.4 5,342,194 + +0.1 5,342,194 + -2.8 5,342,195 - -1.6 5,342,195 - -1.1 5,342,235 + -0.3 5,342,238 - -0.2 5,342,238 - -3.1 5,342,266 + -0.3 5,342,267 - -1.7 5,342,272 + -2.2 5,342,314 + -0.3 5,342,314 + +0.7 5,342,314 + +0.4 5,342,347 + +0.4 5,342,373 + +0.5 5,342,374 - -2.5 5,342,376 + -1.7 5,342,376 + +0.7 5,342,377 - -0.2 5,342,380 - -2.5 5,342,388 - -0.4 5,342,406 + +0.8 5,342,418 + +0.3 5,342,430 - -1.7 5,342,456 + +1.5 5,342,475 + -2.3 5,342,499 - +0.8 5,342,504 + +0.9 5,342,624 + Echvi_4468 0.11 -0.9 5,342,624 + Echvi_4468 0.11 -2.3 5,342,627 + Echvi_4468 0.12 +0.4 5,342,652 + Echvi_4468 0.13 +1.5 5,342,652 + Echvi_4468 0.13 +1.4 5,342,813 + Echvi_4468 0.19 -0.7 5,342,855 + Echvi_4468 0.21 +1.8 5,342,900 - Echvi_4468 0.23 +0.5 5,342,931 - Echvi_4468 0.24 -1.7 5,342,984 + Echvi_4468 0.26 -0.2 5,342,984 + Echvi_4468 0.26 -0.2 5,342,984 + Echvi_4468 0.26 -0.7 5,343,025 + Echvi_4468 0.27 -0.5 5,343,025 + Echvi_4468 0.27 +1.3 5,343,025 + Echvi_4468 0.27 +0.0 5,343,026 - Echvi_4468 0.28 -2.0 5,343,028 - Echvi_4468 0.28 -2.1 5,343,028 - Echvi_4468 0.28 -0.6 5,343,047 + Echvi_4468 0.28 +0.9 5,343,053 + Echvi_4468 0.29 +5.4 5,343,053 + Echvi_4468 0.29 +0.8 5,343,062 + Echvi_4468 0.29 -0.3 5,343,177 + Echvi_4468 0.34 +0.6 5,343,177 + Echvi_4468 0.34 -1.2 5,343,177 + Echvi_4468 0.34 -1.5 5,343,207 + Echvi_4468 0.35 -1.5 5,343,216 + Echvi_4468 0.35 -1.2 5,343,216 + Echvi_4468 0.35 +0.9 5,343,217 - Echvi_4468 0.35 -0.7 5,343,225 + Echvi_4468 0.35 +0.3 5,343,226 - Echvi_4468 0.36 -2.7 5,343,255 + Echvi_4468 0.37 -0.1 5,343,326 + Echvi_4468 0.40 +0.5 5,343,326 + Echvi_4468 0.40 -0.8 5,343,364 - Echvi_4468 0.41 -1.6 5,343,417 + Echvi_4468 0.43 +0.5 5,343,418 - Echvi_4468 0.43 -3.1 5,343,434 - Echvi_4468 0.44 -1.2 5,343,549 - Echvi_4468 0.48 -2.1 5,343,615 + Echvi_4468 0.51 -1.2 5,343,641 + Echvi_4468 0.52 +2.2 5,343,654 + Echvi_4468 0.53 +0.1 5,343,654 + Echvi_4468 0.53 +2.4 5,343,654 + Echvi_4468 0.53 -0.3 5,343,655 - Echvi_4468 0.53 -1.5 5,343,655 - Echvi_4468 0.53 +0.1 5,343,655 - Echvi_4468 0.53 -1.6 5,343,799 - Echvi_4468 0.58 -0.5 5,343,887 + Echvi_4468 0.62 +1.5 5,343,887 + Echvi_4468 0.62 +0.5 5,343,914 + Echvi_4468 0.63 -0.0 5,343,968 - Echvi_4468 0.65 -0.8 5,344,142 - Echvi_4468 0.72 -1.8 5,344,154 - Echvi_4468 0.73 -0.9 5,344,190 + Echvi_4468 0.74 -0.9 5,344,192 + Echvi_4468 0.74 -1.1 5,344,192 + Echvi_4468 0.74 -1.5 5,344,193 - Echvi_4468 0.74 +0.0 5,344,215 + Echvi_4468 0.75 -1.3 5,344,320 - Echvi_4468 0.79 +0.3 5,344,323 - Echvi_4468 0.79 -0.7 5,344,360 - Echvi_4468 0.81 -1.9 5,344,403 + Echvi_4468 0.83 +1.1 5,344,465 + Echvi_4468 0.85 -0.9 5,344,466 - Echvi_4468 0.85 -0.2 5,344,466 - Echvi_4468 0.85 -0.5 5,344,494 + Echvi_4468 0.86 +0.4 5,344,508 + Echvi_4468 0.87 -0.4 5,344,509 - Echvi_4468 0.87 -0.5 5,344,511 + Echvi_4468 0.87 -1.6 5,344,575 + Echvi_4468 0.89 +0.5 5,344,576 - Echvi_4468 0.89 -2.4 5,344,589 + -0.5 5,344,590 - -1.9 5,344,650 + +1.1 5,344,650 + +1.0 5,344,650 + +0.2 5,344,652 + +0.3 5,344,683 + -3.0 5,344,716 + -1.4 5,344,717 - -1.2 5,344,718 + +0.3 5,344,718 + +1.1 5,344,889 + Echvi_4469 0.13 -1.2 5,344,889 + Echvi_4469 0.13 +0.9 5,344,889 + Echvi_4469 0.13 -1.2 5,344,894 + Echvi_4469 0.14 +0.1 5,344,926 + Echvi_4469 0.21 +1.0 5,344,926 + Echvi_4469 0.21 -0.4 5,344,926 + Echvi_4469 0.21 -1.2 5,344,926 + Echvi_4469 0.21 +0.6 5,344,926 + Echvi_4469 0.21 +0.5 5,344,926 + Echvi_4469 0.21 -0.5 5,344,926 + Echvi_4469 0.21 -1.9 5,344,926 + Echvi_4469 0.21 +1.0 5,344,926 + Echvi_4469 0.21 +0.7 5,344,927 - Echvi_4469 0.21 +2.1 5,344,927 - Echvi_4469 0.21 +0.0 5,344,952 + Echvi_4469 0.27 -2.2 5,344,973 - Echvi_4469 0.32 -2.0 5,344,975 + Echvi_4469 0.33 +1.3 5,345,027 - Echvi_4469 0.45 -3.1 5,345,063 - Echvi_4469 0.53 -0.9 5,345,110 + Echvi_4469 0.64 +2.1 5,345,148 + Echvi_4469 0.73 +1.3 5,345,148 + Echvi_4469 0.73 +1.3 5,345,149 - Echvi_4469 0.73 -2.1 5,345,149 - Echvi_4469 0.73 -0.9 5,345,149 - Echvi_4469 0.73 -1.1 5,345,149 - Echvi_4469 0.73 -0.3 5,345,149 - Echvi_4469 0.73 -2.7 5,345,149 - Echvi_4469 0.73 -0.3 5,345,210 + Echvi_4469 0.87 +0.3 5,345,225 + -0.2 5,345,244 - -0.5 5,345,283 - -2.5 5,345,289 + -0.6 5,345,292 + +0.4 5,345,292 + +2.6 5,345,293 - +0.6 5,345,447 - Echvi_4470 0.19 -0.8 5,345,447 - Echvi_4470 0.19 -0.5 5,345,468 - Echvi_4470 0.21 -1.2 5,345,493 + Echvi_4470 0.24 -0.8 5,345,524 + Echvi_4470 0.27 +0.7 5,345,525 - Echvi_4470 0.28 -1.2 5,345,618 + Echvi_4470 0.38 +0.2 5,345,619 - Echvi_4470 0.38 -3.0 5,345,714 + Echvi_4470 0.49 -0.2 5,345,764 + Echvi_4470 0.54 +0.2 5,345,764 + Echvi_4470 0.54 -0.4 5,345,814 + Echvi_4470 0.60 +0.3
Or see this region's nucleotide sequence