Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3388

Experiment: L-Lysine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (N)
3,996,426	+				-0.3
3,996,442	-				-1.8
3,996,455	+				-0.7
3,996,528	-				-1.2
3,996,572	+		Echvi_3386	0.14	-1.1
3,996,573	-		Echvi_3386	0.15	-1.1
3,996,579	+		Echvi_3386	0.16	-0.1
3,996,579	+		Echvi_3386	0.16	+1.7
3,996,583	+		Echvi_3386	0.16	-0.5
3,996,583	+		Echvi_3386	0.16	-0.4
3,996,583	+		Echvi_3386	0.16	-1.6
3,996,588	-		Echvi_3386	0.17	-2.2
3,996,600	+		Echvi_3386	0.19	-0.9
3,996,601	-		Echvi_3386	0.19	+0.6
3,996,601	-		Echvi_3386	0.19	-0.5
3,996,613	+		Echvi_3386	0.21	-0.6
3,996,618	+		Echvi_3386	0.22	-2.0
3,996,619	-		Echvi_3386	0.22	-1.3
3,996,619	-		Echvi_3386	0.22	+1.8
3,996,669	+		Echvi_3386	0.30	-1.1
3,996,669	+		Echvi_3386	0.30	+1.2
3,996,670	-		Echvi_3386	0.30	-1.8
3,996,735	+		Echvi_3386	0.40	+0.4
3,996,768	+		Echvi_3386	0.45	+0.3
3,996,769	-		Echvi_3386	0.45	-0.5
3,996,834	+		Echvi_3386	0.56	-0.6
3,996,834	+		Echvi_3386	0.56	-0.3
3,996,835	-		Echvi_3386	0.56	-0.5
3,996,867	+		Echvi_3386	0.61	+0.2
3,996,867	+		Echvi_3386	0.61	+1.1
3,996,867	+		Echvi_3386	0.61	-0.8
3,996,867	+		Echvi_3386	0.61	+0.4
3,996,867	+		Echvi_3386	0.61	-2.5
3,996,867	+		Echvi_3386	0.61	-0.6
3,996,867	+		Echvi_3386	0.61	+0.3
3,996,868	-		Echvi_3386	0.61	-1.8
3,996,876	+		Echvi_3386	0.62	+1.2
3,996,876	+		Echvi_3386	0.62	+0.4
3,996,876	+		Echvi_3386	0.62	-0.3
3,996,876	+		Echvi_3386	0.62	-0.7
3,996,876	+		Echvi_3386	0.62	-0.5
3,996,876	+		Echvi_3386	0.62	-1.7
3,996,876	+		Echvi_3386	0.62	+1.5
3,996,876	+		Echvi_3386	0.62	-0.2
3,996,877	-		Echvi_3386	0.62	-0.8
3,996,877	-		Echvi_3386	0.62	-2.3
3,996,877	-		Echvi_3386	0.62	-0.5
3,996,877	-		Echvi_3386	0.62	-0.1
3,996,877	-		Echvi_3386	0.62	-1.3
3,996,877	-		Echvi_3386	0.62	+1.0
3,996,877	-		Echvi_3386	0.62	-0.6
3,996,877	-		Echvi_3386	0.62	-0.1
3,996,877	-		Echvi_3386	0.62	-0.2
3,996,877	-		Echvi_3386	0.62	-3.1
3,996,877	-		Echvi_3386	0.62	+0.2
3,996,877	-		Echvi_3386	0.62	+0.4
3,996,877	-		Echvi_3386	0.62	-0.6
3,996,877	-		Echvi_3386	0.62	-1.7
3,996,877	-		Echvi_3386	0.62	-2.6
3,996,877	-		Echvi_3386	0.62	+0.2
3,996,892	-		Echvi_3386	0.65	+0.4
3,996,892	-		Echvi_3386	0.65	-1.1
3,996,892	-		Echvi_3386	0.65	-1.2
3,996,996	+		Echvi_3386	0.81	+0.4
3,996,996	+		Echvi_3386	0.81	-0.7
3,997,027	+		Echvi_3386	0.86	-0.7
3,997,028	-		Echvi_3386	0.86	-0.0
3,997,029	+		Echvi_3386	0.86	+0.7
3,997,029	+		Echvi_3386	0.86	-0.9
3,997,030	-		Echvi_3386	0.86	-0.9
3,997,030	-		Echvi_3386	0.86	-1.1
3,997,030	-		Echvi_3386	0.86	-0.2
3,997,030	-		Echvi_3386	0.86	-1.8
3,997,073	-				+0.7
3,997,073	-				-1.6
3,997,089	+				-0.8
3,997,092	+				-1.8
3,997,092	+				-0.0
3,997,092	+				-0.0
3,997,092	+				+0.7
3,997,093	-				-0.2
3,997,093	-				+0.4
3,997,093	-				-2.2
3,997,093	-				-0.6
3,997,093	-				-0.2
3,997,094	+				-0.3
3,997,095	-				-2.8
3,997,095	-				-0.9
3,997,103	-				+1.1
3,997,114	-				+0.2
3,997,150	-				+1.0
3,997,153	+				-0.8
3,997,235	+		Echvi_3387	0.30	-1.2
3,997,246	+		Echvi_3387	0.37	-0.8
3,997,247	-		Echvi_3387	0.37	-1.0
3,997,272	+		Echvi_3387	0.52	+0.5
3,997,273	-		Echvi_3387	0.52	+0.1
3,997,303	+		Echvi_3387	0.70	-0.8
3,997,304	-		Echvi_3387	0.70	-1.5
3,997,314	-		Echvi_3387	0.76	+0.1
3,997,315	+		Echvi_3387	0.76	+1.8
3,997,315	+		Echvi_3387	0.76	-0.6
3,997,315	+		Echvi_3387	0.76	+2.0
3,997,336	+		Echvi_3387	0.89	-1.1
3,997,336	+		Echvi_3387	0.89	-1.3
3,997,337	-		Echvi_3387	0.89	-0.3
3,997,349	+				-0.3
3,997,359	-				-1.7
3,997,359	-				+0.5
3,997,367	-				-1.1
3,997,394	+				-0.8
3,997,394	+				+0.1
3,997,395	-				-0.6
3,997,403	+				-1.6
3,997,417	-				+0.3
3,997,456	+				-1.0
3,997,492	-				-0.1
3,997,512	+		Echvi_3388	0.12	+2.0
3,997,512	+		Echvi_3388	0.12	+0.1
3,997,515	+		Echvi_3388	0.12	+1.0
3,997,573	+		Echvi_3388	0.20	-0.6
3,997,611	+		Echvi_3388	0.25	+0.0
3,997,611	+		Echvi_3388	0.25	-0.8
3,997,612	-		Echvi_3388	0.25	+0.1
3,997,612	-		Echvi_3388	0.25	-0.8
3,997,612	-		Echvi_3388	0.25	-1.6
3,997,667	+		Echvi_3388	0.32	+0.0
3,997,667	+		Echvi_3388	0.32	-1.3
3,997,668	-		Echvi_3388	0.32	+0.8
3,997,727	-		Echvi_3388	0.40	+1.2
3,997,741	-		Echvi_3388	0.41	-0.5
3,997,741	-		Echvi_3388	0.41	-1.9
3,997,741	-		Echvi_3388	0.41	-0.6
3,997,790	+		Echvi_3388	0.48	-1.0
3,997,820	+		Echvi_3388	0.52	-1.5
3,997,848	+		Echvi_3388	0.55	+1.4
3,997,856	+		Echvi_3388	0.56	-0.4
3,997,856	+		Echvi_3388	0.56	-0.8
3,997,856	+		Echvi_3388	0.56	+0.3
3,997,856	+		Echvi_3388	0.56	-1.4
3,997,856	+		Echvi_3388	0.56	+0.7
3,997,856	+		Echvi_3388	0.56	-0.2
3,997,856	+		Echvi_3388	0.56	-0.6
3,997,863	-		Echvi_3388	0.57	+0.7
3,997,863	-		Echvi_3388	0.57	-0.0
3,998,033	+		Echvi_3388	0.79	-0.4
3,998,058	+		Echvi_3388	0.82	+0.3
3,998,109	-		Echvi_3388	0.89	+0.7
3,998,147	+				-2.8
3,998,159	-				+0.7
3,998,195	+				-0.8
3,998,196	-				+0.7
3,998,217	+				-1.5
3,998,265	+				+0.8
3,998,266	-				-0.0
3,998,266	-				+0.8
3,998,266	-				+0.3
3,998,286	+				+0.8
3,998,286	+				+1.7
3,998,381	-		Echvi_3389	0.16	+2.4
3,998,419	+		Echvi_3389	0.20	-1.5
3,998,443	-		Echvi_3389	0.23	+2.3
3,998,454	+		Echvi_3389	0.24	-0.8
3,998,454	+		Echvi_3389	0.24	+2.3
3,998,454	+		Echvi_3389	0.24	-0.8
3,998,454	+		Echvi_3389	0.24	+1.1
3,998,454	+		Echvi_3389	0.24	+1.1
3,998,454	+		Echvi_3389	0.24	-1.2
3,998,454	+		Echvi_3389	0.24	+0.6
3,998,455	-		Echvi_3389	0.25	+1.1
3,998,457	-		Echvi_3389	0.25	+1.2
3,998,457	-		Echvi_3389	0.25	+0.5
3,998,457	-		Echvi_3389	0.25	+1.4
3,998,483	+		Echvi_3389	0.28	+3.0
3,998,483	+		Echvi_3389	0.28	+0.2
3,998,553	+		Echvi_3389	0.36	+0.7
3,998,553	+		Echvi_3389	0.36	-0.2
3,998,553	+		Echvi_3389	0.36	+2.6
3,998,554	-		Echvi_3389	0.36	+1.0
3,998,554	-		Echvi_3389	0.36	+0.6
3,998,554	-		Echvi_3389	0.36	-1.0
3,998,563	-		Echvi_3389	0.37	+2.1
3,998,629	+		Echvi_3389	0.44	-0.3
3,998,839	+		Echvi_3389	0.68	+1.1
3,998,839	+		Echvi_3389	0.68	+1.7
3,998,840	-		Echvi_3389	0.68	+0.9
3,998,840	-		Echvi_3389	0.68	+1.8
3,998,915	+		Echvi_3389	0.77	+1.0
3,998,916	-		Echvi_3389	0.77	-1.5
3,998,916	-		Echvi_3389	0.77	+1.8
3,998,935	-		Echvi_3389	0.79	-0.7
3,998,935	-		Echvi_3389	0.79	+1.4
3,998,991	+		Echvi_3389	0.86	-1.3
3,998,992	-		Echvi_3389	0.86	+1.2
3,998,992	-		Echvi_3389	0.86	+0.9
3,999,095	+				+2.0
3,999,100	+				+1.0
3,999,101	-				+1.5
3,999,131	+				+1.8
3,999,134	-				+2.2