Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3346

Experiment: L-Lysine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (N)
3,948,970	+		Echvi_3345	0.25	-2.5
3,948,970	+		Echvi_3345	0.25	-0.0
3,948,975	+		Echvi_3345	0.25	+1.2
3,948,975	+		Echvi_3345	0.25	+1.2
3,949,000	+		Echvi_3345	0.28	-0.5
3,949,000	+		Echvi_3345	0.28	+1.2
3,949,000	+		Echvi_3345	0.28	+0.1
3,949,000	+		Echvi_3345	0.28	-0.4
3,949,001	-		Echvi_3345	0.28	-0.7
3,949,001	-		Echvi_3345	0.28	-0.3
3,949,001	-		Echvi_3345	0.28	-1.0
3,949,043	+		Echvi_3345	0.32	-0.8
3,949,106	-		Echvi_3345	0.38	-1.8
3,949,141	+		Echvi_3345	0.42	-1.9
3,949,141	+		Echvi_3345	0.42	+0.5
3,949,186	+		Echvi_3345	0.46	-1.1
3,949,186	+		Echvi_3345	0.46	-2.0
3,949,186	+		Echvi_3345	0.46	-0.5
3,949,186	+		Echvi_3345	0.46	-0.5
3,949,186	+		Echvi_3345	0.46	+0.9
3,949,187	-		Echvi_3345	0.46	-0.6
3,949,258	+		Echvi_3345	0.53	+1.5
3,949,335	-		Echvi_3345	0.61	-1.5
3,949,376	+		Echvi_3345	0.65	+1.3
3,949,376	+		Echvi_3345	0.65	-0.2
3,949,376	+		Echvi_3345	0.65	+1.0
3,949,376	+		Echvi_3345	0.65	+1.2
3,949,377	-		Echvi_3345	0.65	+0.2
3,949,465	-		Echvi_3345	0.74	-0.0
3,949,480	+		Echvi_3345	0.75	+1.0
3,949,530	-		Echvi_3345	0.80	-1.2
3,949,530	-		Echvi_3345	0.80	-0.3
3,949,531	+		Echvi_3345	0.80	-1.4
3,949,531	+		Echvi_3345	0.80	-0.8
3,949,531	+		Echvi_3345	0.80	-0.6
3,949,531	+		Echvi_3345	0.80	-0.4
3,949,531	+		Echvi_3345	0.80	-0.7
3,949,531	+		Echvi_3345	0.80	+2.0
3,949,531	+		Echvi_3345	0.80	+0.3
3,949,531	+		Echvi_3345	0.80	+0.5
3,949,531	+		Echvi_3345	0.80	-1.1
3,949,531	+		Echvi_3345	0.80	-0.4
3,949,532	-		Echvi_3345	0.80	-3.0
3,949,532	-		Echvi_3345	0.80	-1.0
3,949,532	-		Echvi_3345	0.80	+0.0
3,949,545	+		Echvi_3345	0.82	-1.8
3,949,545	+		Echvi_3345	0.82	-2.1
3,949,546	-		Echvi_3345	0.82	+1.1
3,949,546	-		Echvi_3345	0.82	-0.4
3,949,546	-		Echvi_3345	0.82	+0.6
3,949,546	-		Echvi_3345	0.82	-1.8
3,949,554	-		Echvi_3345	0.83	+2.0
3,949,555	+		Echvi_3345	0.83	+1.4
3,949,555	+		Echvi_3345	0.83	-0.2
3,949,556	-		Echvi_3345	0.83	-1.7
3,949,598	+		Echvi_3345	0.87	-0.2
3,949,598	+		Echvi_3345	0.87	+3.8
3,949,598	+		Echvi_3345	0.87	-2.2
3,949,599	-		Echvi_3345	0.87	-0.6
3,949,599	-		Echvi_3345	0.87	+0.4
3,949,609	+		Echvi_3345	0.88	+0.7
3,949,615	+		Echvi_3345	0.89	-2.8
3,949,621	+		Echvi_3345	0.89	-0.5
3,949,622	-		Echvi_3345	0.89	+0.0
3,949,629	+				-0.0
3,949,713	+				+1.1
3,949,714	-				-0.0
3,949,727	+				-0.3
3,949,734	-				-0.3
3,949,739	+				-0.2
3,949,747	+				+0.8
3,949,796	+				+1.4
3,949,815	+				+2.2
3,949,887	+				-0.2
3,949,887	+				+0.1
3,949,968	+				-1.2
3,949,968	+				+0.4
3,949,982	+				-1.8
3,950,010	-				+0.5
3,950,015	+				+0.4
3,950,054	-		Echvi_3346	0.14	-0.5
3,950,083	+		Echvi_3346	0.17	-1.5
3,950,084	-		Echvi_3346	0.17	-0.9
3,950,090	-		Echvi_3346	0.18	+0.5
3,950,102	+		Echvi_3346	0.19	+0.6
3,950,102	+		Echvi_3346	0.19	-0.8
3,950,103	-		Echvi_3346	0.20	-2.2
3,950,103	-		Echvi_3346	0.20	-0.1
3,950,103	-		Echvi_3346	0.20	-0.1
3,950,115	+		Echvi_3346	0.21	-0.1
3,950,137	+		Echvi_3346	0.24	+0.7
3,950,198	-		Echvi_3346	0.31	+0.4
3,950,201	-		Echvi_3346	0.32	-0.0
3,950,201	-		Echvi_3346	0.32	+0.3
3,950,201	-		Echvi_3346	0.32	+0.3
3,950,222	+		Echvi_3346	0.34	+1.4
3,950,223	-		Echvi_3346	0.34	-0.6
3,950,251	-		Echvi_3346	0.38	-0.9
3,950,251	-		Echvi_3346	0.38	-3.8
3,950,255	+		Echvi_3346	0.38	+1.1
3,950,271	+		Echvi_3346	0.40	+2.0
3,950,271	+		Echvi_3346	0.40	-0.5
3,950,272	-		Echvi_3346	0.40	-1.9
3,950,300	+		Echvi_3346	0.44	-0.9
3,950,313	+		Echvi_3346	0.45	-1.6
3,950,367	+		Echvi_3346	0.52	+0.3
3,950,396	-		Echvi_3346	0.55	-0.8
3,950,417	+		Echvi_3346	0.58	+1.0
3,950,418	-		Echvi_3346	0.58	-0.6
3,950,443	-		Echvi_3346	0.61	-1.4
3,950,519	+		Echvi_3346	0.70	+0.4
3,950,519	+		Echvi_3346	0.70	-0.8
3,950,522	+		Echvi_3346	0.71	+0.2
3,950,531	+		Echvi_3346	0.72	-3.1
3,950,538	+		Echvi_3346	0.73	+1.0
3,950,538	+		Echvi_3346	0.73	+0.1
3,950,539	-		Echvi_3346	0.73	+0.4
3,950,556	-		Echvi_3346	0.75	-1.0
3,950,566	+		Echvi_3346	0.76	-2.7
3,950,566	+		Echvi_3346	0.76	-2.4
3,950,567	-		Echvi_3346	0.76	-1.4
3,950,592	+		Echvi_3346	0.79	-0.2
3,950,603	+		Echvi_3346	0.80	-1.1
3,950,603	+		Echvi_3346	0.80	-1.7
3,950,604	-		Echvi_3346	0.81	-0.5
3,950,641	-		Echvi_3346	0.85	-0.8
3,950,641	-		Echvi_3346	0.85	+0.1
3,950,646	+		Echvi_3346	0.86	+1.0
3,950,647	-		Echvi_3346	0.86	-1.3
3,950,658	-		Echvi_3346	0.87	-0.5
3,950,688	+				-0.4
3,950,689	-				-1.6
3,950,690	+				+0.1
3,950,690	+				+0.7
3,950,691	-				-0.5
3,950,691	-				-0.1
3,950,691	-				+0.7
3,950,691	-				+0.6
3,950,708	-				+0.1
3,950,708	-				+0.5
3,950,778	+				-1.0
3,950,789	+				+0.1
3,950,810	-				+0.4
3,950,930	+				+0.5
3,950,931	-				-0.7
3,950,943	+				+0.8
3,950,977	+				+0.1
3,950,977	+				+0.4
3,950,977	+				+2.0
3,950,988	+				-0.0
3,951,008	+				+0.7
3,951,165	+				+0.9
3,951,165	+				-0.0
3,951,166	-				-1.5
3,951,173	-				-0.5
3,951,174	+				-0.4
3,951,174	+				+0.2
3,951,175	-				-2.6
3,951,175	-				-0.3
3,951,294	+				-0.4
3,951,294	+				+0.4
3,951,294	+				+0.1
3,951,294	+				-0.1
3,951,294	+				+0.5
3,951,294	+				-3.2
3,951,294	+				+1.5
3,951,294	+				-2.2
3,951,294	+				+0.4
3,951,294	+				+1.2
3,951,295	-				+1.0
3,951,295	-				+0.3
3,951,295	-				-1.1
3,951,295	-				+0.6
3,951,295	-				+0.4
3,951,295	-				-1.6
3,951,295	-				+0.7
3,951,296	+				+0.5
3,951,296	+				-0.7
3,951,296	+				+0.1
3,951,296	+				-0.5
3,951,296	+				+0.5
3,951,296	+				-0.4
3,951,296	+				+1.0
3,951,296	+				+1.1
3,951,297	-				-0.0
3,951,297	-				+0.4
3,951,297	-				+0.9
3,951,298	+				+0.6
3,951,298	+				+1.5
3,951,298	+				-0.0
3,951,298	+				-0.4
3,951,298	+				-2.1
3,951,299	-				-0.6
3,951,299	-				+1.2
3,951,363	-		Echvi_3347	0.32	-0.3
3,951,568	-				-0.1
3,951,659	+				-1.8
3,951,659	+				-1.5
3,951,659	+				-0.3
3,951,659	+				-0.6
3,951,682	-				-0.5
3,951,682	-				-0.2
3,951,682	-				+4.5