Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3266

Experiment: L-Lysine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (N)
3,868,587	+		Echvi_3264	0.38	+0.2
3,868,587	+		Echvi_3264	0.38	-0.3
3,868,613	+		Echvi_3264	0.45	+0.1
3,868,615	+		Echvi_3264	0.45	+0.9
3,868,616	-		Echvi_3264	0.45	-1.3
3,868,616	-		Echvi_3264	0.45	-0.9
3,868,616	-		Echvi_3264	0.45	-0.8
3,868,619	+		Echvi_3264	0.46	-2.3
3,868,619	+		Echvi_3264	0.46	-0.3
3,868,630	+		Echvi_3264	0.49	-0.4
3,868,655	+		Echvi_3264	0.55	-1.7
3,868,655	+				+0.4
3,868,667	+		Echvi_3264	0.58	+0.1
3,868,696	+		Echvi_3264	0.65	+1.2
3,868,698	+		Echvi_3264	0.65	+1.5
3,868,699	-		Echvi_3264	0.65	+1.3
3,868,769	+		Echvi_3264	0.82	-0.6
3,868,770	-		Echvi_3264	0.83	-1.7
3,868,802	-				-2.2
3,868,833	+				-0.6
3,868,834	-				+0.6
3,868,834	-				+0.5
3,868,863	+				+0.1
3,868,864	-				-0.2
3,868,872	+				-0.5
3,868,872	+				+1.2
3,868,873	-				-1.2
3,868,887	-				+0.2
3,868,897	+				+0.4
3,869,166	+		Echvi_3265	0.45	-0.1
3,869,169	+		Echvi_3265	0.45	+0.1
3,869,285	+		Echvi_3265	0.61	-0.5
3,869,285	+		Echvi_3265	0.61	-0.0
3,869,285	+		Echvi_3265	0.61	-0.5
3,869,316	+		Echvi_3265	0.66	+0.4
3,869,338	-		Echvi_3265	0.69	-0.3
3,869,338	-		Echvi_3265	0.69	+0.1
3,869,369	+		Echvi_3265	0.73	+0.6
3,869,369	+		Echvi_3265	0.73	+2.0
3,869,370	-		Echvi_3265	0.73	-3.0
3,869,370	-		Echvi_3265	0.73	+0.7
3,869,370	-		Echvi_3265	0.73	-0.6
3,869,562	+				+3.0
3,869,563	-				-3.1
3,869,569	+				+0.5
3,869,569	+				-0.7
3,869,570	-				-2.9
3,869,570	-				-1.3
3,869,570	-				-0.8
3,869,600	+				+1.6
3,869,600	+				-1.7
3,869,649	+				-2.2
3,869,652	+				+0.5
3,869,697	+				+1.7
3,869,706	-				+0.7
3,869,711	+				-1.4
3,869,711	+				-0.6
3,869,804	+		Echvi_3266	0.14	+0.0
3,869,894	+		Echvi_3266	0.20	-0.4
3,869,895	-		Echvi_3266	0.20	-1.3
3,869,895	-		Echvi_3266	0.20	-3.2
3,869,916	-		Echvi_3266	0.22	-1.9
3,869,952	+		Echvi_3266	0.24	-2.9
3,870,008	+		Echvi_3266	0.27	-0.8
3,870,008	+		Echvi_3266	0.27	-1.1
3,870,014	+		Echvi_3266	0.28	-0.7
3,870,014	+		Echvi_3266	0.28	-2.0
3,870,014	+		Echvi_3266	0.28	+0.6
3,870,015	-		Echvi_3266	0.28	+0.1
3,870,015	-		Echvi_3266	0.28	+0.1
3,870,057	+		Echvi_3266	0.30	-0.7
3,870,077	+		Echvi_3266	0.32	-0.8
3,870,077	+		Echvi_3266	0.32	-0.8
3,870,078	-		Echvi_3266	0.32	-0.8
3,870,078	-		Echvi_3266	0.32	-1.0
3,870,078	-		Echvi_3266	0.32	-0.5
3,870,078	-		Echvi_3266	0.32	+3.5
3,870,081	-		Echvi_3266	0.32	-0.4
3,870,101	+		Echvi_3266	0.33	+1.0
3,870,268	-		Echvi_3266	0.44	-2.5
3,870,326	-		Echvi_3266	0.48	+0.7
3,870,335	+		Echvi_3266	0.48	+0.4
3,870,458	+		Echvi_3266	0.56	+0.1
3,870,458	+		Echvi_3266	0.56	-1.6
3,870,458	+		Echvi_3266	0.56	-1.1
3,870,458	+		Echvi_3266	0.56	-3.5
3,870,459	-		Echvi_3266	0.56	-0.1
3,870,459	-		Echvi_3266	0.56	+0.1
3,870,565	+		Echvi_3266	0.63	-0.5
3,870,568	-		Echvi_3266	0.63	+0.3
3,870,665	-		Echvi_3266	0.69	-0.7
3,870,665	-		Echvi_3266	0.69	-1.0
3,870,665	-		Echvi_3266	0.69	+2.1
3,870,669	-		Echvi_3266	0.69	-0.9
3,870,696	+		Echvi_3266	0.71	-0.0
3,870,699	-		Echvi_3266	0.71	+0.7
3,870,699	-		Echvi_3266	0.71	-0.0
3,870,727	+		Echvi_3266	0.73	-2.7
3,870,727	+		Echvi_3266	0.73	-1.2
3,870,727	+		Echvi_3266	0.73	+0.5
3,870,727	+		Echvi_3266	0.73	-0.9
3,870,727	+		Echvi_3266	0.73	+1.6
3,870,727	+		Echvi_3266	0.73	-1.4
3,870,728	-		Echvi_3266	0.73	+0.7
3,870,728	-		Echvi_3266	0.73	+1.0
3,870,789	-		Echvi_3266	0.77	-1.0
3,870,819	-		Echvi_3266	0.79	+0.7
3,870,917	+		Echvi_3266	0.85	-2.0
3,870,917	+		Echvi_3266	0.85	-1.5
3,870,917	+		Echvi_3266	0.85	-0.7
3,870,917	+		Echvi_3266	0.85	-0.7
3,870,917	+		Echvi_3266	0.85	+0.7
3,870,918	-		Echvi_3266	0.85	-0.3
3,870,982	+		Echvi_3266	0.89	-0.5
3,870,982	+		Echvi_3266	0.89	-0.6
3,870,982	+		Echvi_3266	0.89	-0.5
3,870,982	+		Echvi_3266	0.89	-0.3
3,870,982	+		Echvi_3266	0.89	+0.4
3,870,982	+		Echvi_3266	0.89	+0.4
3,870,982	+		Echvi_3266	0.89	-1.2
3,870,982	+		Echvi_3266	0.89	+1.0
3,870,982	+		Echvi_3266	0.89	-0.3
3,870,983	-		Echvi_3266	0.89	-1.8
3,870,983	-		Echvi_3266	0.89	-1.3
3,870,983	-		Echvi_3266	0.89	-0.5
3,870,989	-		Echvi_3266	0.89	-2.0
3,870,997	-		Echvi_3266	0.90	+0.8
3,870,997	-		Echvi_3266	0.90	-0.6
3,871,123	+				-0.4
3,871,175	+				-0.8
3,871,176	-				-0.0
3,871,177	+				+1.4
3,871,177	+				+1.8
3,871,178	-				+0.1
3,871,178	-				+0.5
3,871,209	+				-0.7
3,871,209	+				+0.4
3,871,210	-				+0.4
3,871,210	-				-1.7
3,871,210	-				+0.8
3,871,210	-				-0.4
3,871,211	+				-1.6
3,871,254	+				-2.1
3,871,268	-				+0.7
3,871,278	+				-0.1
3,871,441	+				-0.4
3,871,510	-				+0.3
3,871,517	-				-0.1
3,871,518	+				+0.7
3,871,519	-				-0.7
3,871,579	-				+0.7
3,871,579	-				+1.3
3,871,579	-				-1.3
3,871,744	+				-1.9
3,871,749	-				+0.5
3,871,753	+				+0.9
3,871,813	+		Echvi_3267	0.14	+1.1
3,871,828	+		Echvi_3267	0.16	+0.3
3,871,828	+		Echvi_3267	0.16	-1.2
3,871,828	+		Echvi_3267	0.16	-0.5
3,871,829	-		Echvi_3267	0.16	+0.4
3,871,835	-		Echvi_3267	0.17	+0.5
3,871,835	-		Echvi_3267	0.17	+0.2
3,871,917	-		Echvi_3267	0.29	+0.1
3,871,917	-		Echvi_3267	0.29	-0.3
3,871,945	-		Echvi_3267	0.33	+0.5
3,872,014	-		Echvi_3267	0.42	+1.1
3,872,014	-		Echvi_3267	0.42	-2.5
3,872,112	+		Echvi_3267	0.56	+0.1
3,872,112	+		Echvi_3267	0.56	-0.6
3,872,112	+		Echvi_3267	0.56	-1.6
3,872,123	+		Echvi_3267	0.58	-0.2
3,872,155	-		Echvi_3267	0.62	+1.6