Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3038

Experiment: L-Lysine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (N)
3,628,075	-		Echvi_3037	0.71	+1.4
3,628,078	-		Echvi_3037	0.71	+0.4
3,628,079	+		Echvi_3037	0.71	+0.0
3,628,088	+		Echvi_3037	0.72	-2.1
3,628,143	+		Echvi_3037	0.76	-1.8
3,628,144	-		Echvi_3037	0.76	+0.7
3,628,155	-		Echvi_3037	0.77	-0.6
3,628,155	-		Echvi_3037	0.77	-2.1
3,628,175	+		Echvi_3037	0.78	+1.0
3,628,175	+		Echvi_3037	0.78	-1.4
3,628,217	+		Echvi_3037	0.81	+0.0
3,628,218	-		Echvi_3037	0.81	+1.7
3,628,218	-		Echvi_3037	0.81	-0.4
3,628,230	+		Echvi_3037	0.82	-1.8
3,628,231	-		Echvi_3037	0.82	+0.1
3,628,283	-		Echvi_3037	0.86	-0.6
3,628,317	+		Echvi_3037	0.88	-2.5
3,628,317	+		Echvi_3037	0.88	-0.4
3,628,318	-		Echvi_3037	0.89	-1.0
3,628,318	-		Echvi_3037	0.89	+1.8
3,628,327	-		Echvi_3037	0.89	-0.1
3,628,360	-				+0.5
3,628,377	-				+0.2
3,628,435	+				-1.7
3,628,436	-				-0.1
3,628,437	+				-0.4
3,628,438	-				-0.2
3,628,438	-				-0.4
3,628,438	-				+2.0
3,628,463	-				-0.9
3,628,494	+				+0.8
3,628,495	-				-1.2
3,628,501	+				-0.5
3,628,536	-				-0.1
3,628,552	+				-2.4
3,628,620	+				-0.7
3,628,621	-				-1.3
3,628,621	-				-0.8
3,628,621	-				+1.1
3,628,697	+				-0.2
3,628,698	-				-0.6
3,628,698	-				+0.2
3,628,767	+				-0.1
3,628,767	+				-0.1
3,628,783	-				-0.1
3,628,783	-				-2.1
3,628,863	-				-1.9
3,628,863	-				-0.8
3,628,898	+				-1.1
3,628,908	+				-2.7
3,628,932	+				-0.6
3,628,933	-				+0.2
3,629,007	+				+0.3
3,629,028	+				-0.1
3,629,028	+				+3.7
3,629,028	+				+3.3
3,629,028	+				+1.3
3,629,028	+				+1.2
3,629,028	+				+3.5
3,629,028	+				+2.0
3,629,029	-				+1.0
3,629,033	-				+1.5
3,629,033	-				+0.8
3,629,068	+				-1.9
3,629,072	+				-0.6
3,629,072	+				-0.1
3,629,072	+				-3.1
3,629,073	-				+1.2
3,629,073	-				+0.8
3,629,073	-				+0.0
3,629,073	-				+1.3
3,629,073	-				+2.3
3,629,094	+				-3.4
3,629,204	+		Echvi_3038	0.13	-4.0
3,629,222	+		Echvi_3038	0.14	-1.8
3,629,223	-		Echvi_3038	0.15	+1.7
3,629,223	-		Echvi_3038	0.15	+2.7
3,629,223	-		Echvi_3038	0.15	-0.6
3,629,223	-		Echvi_3038	0.15	+1.4
3,629,245	-		Echvi_3038	0.17	+0.9
3,629,270	-		Echvi_3038	0.19	+2.0
3,629,285	-		Echvi_3038	0.21	-0.5
3,629,318	-		Echvi_3038	0.24	+1.8
3,629,318	-		Echvi_3038	0.24	+0.6
3,629,357	+		Echvi_3038	0.28	-1.0
3,629,359	+		Echvi_3038	0.28	-1.5
3,629,359	+		Echvi_3038	0.28	-2.7
3,629,359	+		Echvi_3038	0.28	-1.4
3,629,359	+		Echvi_3038	0.28	-3.6
3,629,359	+		Echvi_3038	0.28	-3.9
3,629,360	-		Echvi_3038	0.28	+0.4
3,629,360	-		Echvi_3038	0.28	+1.0
3,629,360	-		Echvi_3038	0.28	+1.3
3,629,360	-		Echvi_3038	0.28	+1.2
3,629,360	-		Echvi_3038	0.28	+0.9
3,629,360	-		Echvi_3038	0.28	+0.7
3,629,449	+		Echvi_3038	0.37	-1.6
3,629,450	-		Echvi_3038	0.37	-0.1
3,629,517	+		Echvi_3038	0.43	-1.0
3,629,526	+		Echvi_3038	0.44	-1.3
3,629,536	+		Echvi_3038	0.45	-1.6
3,629,537	-		Echvi_3038	0.45	-1.4
3,629,537	-		Echvi_3038	0.45	-1.2
3,629,552	-		Echvi_3038	0.47	-1.9
3,629,599	-		Echvi_3038	0.51	+0.4
3,629,653	+		Echvi_3038	0.57	+1.0
3,629,668	+		Echvi_3038	0.58	-0.4
3,629,732	+		Echvi_3038	0.64	-1.1
3,629,732	+		Echvi_3038	0.64	-1.9
3,629,732	+		Echvi_3038	0.64	-1.7
3,629,732	+		Echvi_3038	0.64	-2.1
3,629,733	-		Echvi_3038	0.65	-2.9
3,629,733	-		Echvi_3038	0.65	-1.3
3,629,733	-		Echvi_3038	0.65	-2.8
3,629,734	+		Echvi_3038	0.65	-4.2
3,629,734	+		Echvi_3038	0.65	-2.0
3,629,735	-		Echvi_3038	0.65	-2.9
3,629,735	-		Echvi_3038	0.65	-1.8
3,629,735	-		Echvi_3038	0.65	-1.3
3,629,736	+		Echvi_3038	0.65	-2.3
3,629,737	-		Echvi_3038	0.65	-2.3
3,629,820	+		Echvi_3038	0.73	-2.4
3,629,854	-		Echvi_3038	0.76	-1.0
3,629,878	+		Echvi_3038	0.79	-1.7
3,629,878	+		Echvi_3038	0.79	-1.6
3,629,879	-		Echvi_3038	0.79	+1.0
3,629,880	+		Echvi_3038	0.79	-2.8
3,629,880	+		Echvi_3038	0.79	-3.4
3,629,898	+		Echvi_3038	0.81	-0.8
3,629,939	-		Echvi_3038	0.85	-2.6
3,629,947	+		Echvi_3038	0.85	-0.3
3,630,133	-				-2.0
3,630,153	+				+0.5
3,630,154	-				-2.3
3,630,178	+				+0.0
3,630,192	+				-0.8
3,630,193	-				-1.9
3,630,193	-				-0.3
3,630,193	-				-0.9
3,630,201	-				-3.1
3,630,212	-				+0.4
3,630,269	-				-0.4
3,630,292	+		Echvi_3039	0.15	-0.8
3,630,317	+		Echvi_3039	0.26	+1.2
3,630,318	-		Echvi_3039	0.26	-0.3
3,630,342	-		Echvi_3039	0.36	-0.9
3,630,371	+		Echvi_3039	0.49	+0.4
3,630,373	+		Echvi_3039	0.50	+0.3
3,630,373	+		Echvi_3039	0.50	-0.6
3,630,373	+		Echvi_3039	0.50	+0.5
3,630,373	+		Echvi_3039	0.50	+0.5
3,630,378	-		Echvi_3039	0.52	-2.0
3,630,378	-		Echvi_3039	0.52	-0.1
3,630,427	+		Echvi_3039	0.73	+0.2
3,630,428	-		Echvi_3039	0.73	-0.9
3,630,429	+		Echvi_3039	0.74	-1.8
3,630,429	+		Echvi_3039	0.74	+0.1
3,630,429	+		Echvi_3039	0.74	+1.3
3,630,452	+		Echvi_3039	0.83	-1.3
3,630,453	-		Echvi_3039	0.84	-1.6
3,630,453	-		Echvi_3039	0.84	+0.0
3,630,488	+				+0.9
3,630,488	+				-1.9
3,630,533	+				-0.9
3,630,537	-				-1.0
3,630,546	+				-0.5
3,630,546	+				-0.2
3,630,546	+				+1.4
3,630,547	-				-0.2
3,630,547	-				-0.8
3,630,568	+				-0.4
3,630,568	+				+0.0
3,630,569	-				-2.7
3,630,569	-				-0.4
3,630,569	-				-2.4
3,630,569	-				+1.3
3,630,600	+				-0.7
3,630,650	+				+0.4
3,630,650	+				+0.2
3,630,651	-				-2.2
3,630,651	-				-0.6
3,630,678	+				+1.4
3,630,686	+				-2.1
3,630,686	+				-1.6
3,630,687	-				-0.3
3,630,687	-				-0.6
3,630,697	+				-0.2
3,630,697	+				+2.2
3,630,697	+				-0.8
3,630,698	-				-0.8
3,630,698	-				+0.4
3,630,703	-				+0.7
3,630,703	-				-1.9
3,630,717	-				-0.1
3,630,746	-				-0.6
3,630,750	+				+0.9
3,630,751	-				+0.9
3,630,751	-				+0.6
3,630,751	-				+0.8
3,630,757	-				+0.9
3,630,763	+				+0.1
3,630,763	+				-0.9
3,630,763	+				+0.2
3,630,763	+				+0.4
3,630,764	-				-2.1
3,630,764	-				-3.1
3,630,778	+				+0.7
3,630,786	+				-0.8
3,630,786	+				+3.6
3,630,787	-				-0.4
3,630,787	-				-0.8
3,630,852	+				-0.6
3,630,853	-				-0.4
3,630,931	+				-2.7
3,630,932	-				-2.0
3,630,946	-				+1.4
3,630,975	+				-0.7
3,630,976	-				-2.6
3,630,976	-				-1.9
3,630,987	-				+0.1
3,631,004	+				+0.8
3,631,005	-				-0.8
3,631,014	-				+0.4
3,631,026	+				-0.3
3,631,026	+				+0.0
3,631,026	+				+0.0
3,631,027	-				-1.7
3,631,027	-				-1.3
3,631,027	-				-2.4
3,631,027	-				-0.9
3,631,027	-				-2.2
3,631,028	+				-0.3
3,631,029	-				-1.4
3,631,029	-				+0.1
3,631,029	-				+0.6
3,631,029	-				+0.6
3,631,066	+				-0.7
3,631,067	-				+0.1
3,631,067	-				-0.9