Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3000

Experiment: L-Lysine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (N)
3,583,715	-				+0.6
3,583,718	+				+0.8
3,583,718	+				+0.0
3,583,719	-				+0.6
3,583,719	-				-0.6
3,583,719	-				+0.5
3,583,719	-				+0.1
3,583,770	+		Echvi_2999	0.12	-1.3
3,583,770	+		Echvi_2999	0.12	+0.4
3,583,781	+		Echvi_2999	0.13	+0.3
3,583,781	+		Echvi_2999	0.13	+1.3
3,583,782	-		Echvi_2999	0.13	+0.7
3,583,792	+		Echvi_2999	0.14	-0.5
3,583,793	-		Echvi_2999	0.14	-1.2
3,583,875	-		Echvi_2999	0.22	-0.9
3,583,894	+		Echvi_2999	0.24	-2.7
3,583,913	-		Echvi_2999	0.26	-1.1
3,583,915	-		Echvi_2999	0.26	-1.6
3,583,957	+		Echvi_2999	0.30	+0.1
3,583,958	-		Echvi_2999	0.31	+0.4
3,583,961	-		Echvi_2999	0.31	+0.4
3,583,976	+		Echvi_2999	0.32	-0.2
3,583,976	+		Echvi_2999	0.32	+1.5
3,583,977	-		Echvi_2999	0.32	+0.1
3,583,977	-		Echvi_2999	0.32	+3.3
3,583,991	+		Echvi_2999	0.34	+1.5
3,583,991	+		Echvi_2999	0.34	+0.2
3,584,004	-		Echvi_2999	0.35	-0.2
3,584,004	-		Echvi_2999	0.35	-0.5
3,584,012	+		Echvi_2999	0.36	-0.8
3,584,012	+		Echvi_2999	0.36	+0.4
3,584,026	-		Echvi_2999	0.37	-1.2
3,584,055	-		Echvi_2999	0.40	-0.2
3,584,068	-		Echvi_2999	0.42	-0.3
3,584,122	+		Echvi_2999	0.47	-0.2
3,584,123	-		Echvi_2999	0.47	+0.9
3,584,173	-		Echvi_2999	0.52	-1.2
3,584,192	+		Echvi_2999	0.54	+0.7
3,584,192	+		Echvi_2999	0.54	-0.2
3,584,192	+		Echvi_2999	0.54	+1.5
3,584,193	-		Echvi_2999	0.54	+0.9
3,584,210	+		Echvi_2999	0.56	-0.1
3,584,210	+		Echvi_2999	0.56	+0.1
3,584,211	-		Echvi_2999	0.56	+0.2
3,584,211	-		Echvi_2999	0.56	-1.2
3,584,250	+		Echvi_2999	0.60	+1.1
3,584,251	-		Echvi_2999	0.60	-1.7
3,584,299	+		Echvi_2999	0.65	-0.4
3,584,300	-		Echvi_2999	0.65	-0.0
3,584,303	+		Echvi_2999	0.65	+0.3
3,584,304	-		Echvi_2999	0.65	+0.3
3,584,304	-		Echvi_2999	0.65	+0.2
3,584,304	-		Echvi_2999	0.65	+0.6
3,584,470	-		Echvi_2999	0.82	+2.2
3,584,509	+		Echvi_2999	0.86	+1.1
3,584,545	+		Echvi_2999	0.90	-0.9
3,584,577	-				+0.9
3,584,586	-				-0.8
3,584,586	-				+0.7
3,584,598	-				+2.8
3,584,620	+				-0.2
3,584,621	-				-0.3
3,584,640	+				-0.0
3,584,640	+				+1.3
3,584,640	+				+1.2
3,584,696	-				+0.9
3,584,709	+				-0.5
3,584,710	-				+4.1
3,584,710	-				+2.1
3,584,737	+				-1.1
3,584,783	+				+1.1
3,584,790	-				-1.9
3,584,813	-				-0.5
3,584,822	-				-1.7
3,584,824	-				-1.7
3,584,861	-				+0.0
3,584,912	+		Echvi_3000	0.11	-1.5
3,584,912	+		Echvi_3000	0.11	+0.2
3,584,913	-		Echvi_3000	0.11	-0.2
3,585,002	+		Echvi_3000	0.16	+0.4
3,585,014	+		Echvi_3000	0.17	+0.7
3,585,014	+		Echvi_3000	0.17	-1.4
3,585,064	+		Echvi_3000	0.20	+0.3
3,585,117	-		Echvi_3000	0.23	+0.6
3,585,117	-		Echvi_3000	0.23	-0.6
3,585,120	-		Echvi_3000	0.23	+1.5
3,585,120	-		Echvi_3000	0.23	+1.1
3,585,120	-		Echvi_3000	0.23	-0.2
3,585,120	-		Echvi_3000	0.23	+0.5
3,585,121	+		Echvi_3000	0.23	-2.1
3,585,141	-		Echvi_3000	0.24	+0.0
3,585,198	-		Echvi_3000	0.27	+0.5
3,585,244	+		Echvi_3000	0.30	+0.4
3,585,260	-		Echvi_3000	0.31	-1.2
3,585,278	-		Echvi_3000	0.32	+1.3
3,585,352	+		Echvi_3000	0.36	-1.1
3,585,389	+		Echvi_3000	0.38	-1.5
3,585,453	-		Echvi_3000	0.42	-0.7
3,585,487	-		Echvi_3000	0.44	-0.5
3,585,518	-		Echvi_3000	0.45	-0.1
3,585,558	+		Echvi_3000	0.48	-0.2
3,585,597	-		Echvi_3000	0.50	+1.1
3,585,632	-		Echvi_3000	0.52	-0.7
3,585,706	+		Echvi_3000	0.56	+1.2
3,585,707	-		Echvi_3000	0.56	+0.8
3,585,708	+		Echvi_3000	0.56	+3.2
3,585,708	+		Echvi_3000	0.56	+1.2
3,585,709	-		Echvi_3000	0.56	-1.6
3,585,760	+		Echvi_3000	0.59	-0.6
3,585,760	+		Echvi_3000	0.59	+1.2
3,585,761	-		Echvi_3000	0.59	-2.2
3,585,761	-		Echvi_3000	0.59	+0.3
3,585,763	-		Echvi_3000	0.59	+0.6
3,585,763	-		Echvi_3000	0.59	+1.2
3,585,828	-		Echvi_3000	0.63	+0.2
3,585,839	-		Echvi_3000	0.63	+0.8
3,585,839	-		Echvi_3000	0.63	+0.3
3,585,840	+		Echvi_3000	0.63	-0.4
3,585,840	+		Echvi_3000	0.63	+0.0
3,585,840	+		Echvi_3000	0.63	+0.9
3,585,841	-		Echvi_3000	0.63	-3.4
3,585,841	-		Echvi_3000	0.63	-0.9
3,585,908	+		Echvi_3000	0.67	+1.0
3,585,919	+		Echvi_3000	0.68	+0.5
3,585,919	+		Echvi_3000	0.68	+0.5
3,585,920	-		Echvi_3000	0.68	+2.1
3,585,920	-		Echvi_3000	0.68	+0.2
3,585,921	+		Echvi_3000	0.68	-0.6
3,585,921	+		Echvi_3000	0.68	+0.8
3,585,921	+		Echvi_3000	0.68	+0.9
3,585,921	+		Echvi_3000	0.68	-0.3
3,585,921	+		Echvi_3000	0.68	-0.2
3,585,922	-		Echvi_3000	0.68	+1.3
3,585,922	-		Echvi_3000	0.68	-1.7
3,585,922	-		Echvi_3000	0.68	+0.1
3,585,922	-		Echvi_3000	0.68	+0.8
3,585,922	-		Echvi_3000	0.68	+0.9
3,585,922	-		Echvi_3000	0.68	+0.8
3,586,126	+		Echvi_3000	0.79	+0.9
3,586,127	-		Echvi_3000	0.79	+0.7
3,586,127	-		Echvi_3000	0.79	+0.2
3,586,142	+		Echvi_3000	0.80	-0.0
3,586,181	+		Echvi_3000	0.82	-1.2
3,586,181	+		Echvi_3000	0.82	+1.1
3,586,181	+				-0.5
3,586,181	+		Echvi_3000	0.82	-2.1
3,586,182	-		Echvi_3000	0.82	+0.8
3,586,182	-		Echvi_3000	0.82	+0.8
3,586,184	+		Echvi_3000	0.83	+0.2
3,586,185	-		Echvi_3000	0.83	+1.5
3,586,205	+		Echvi_3000	0.84	-0.7
3,586,206	-		Echvi_3000	0.84	-1.4
3,586,206	-		Echvi_3000	0.84	+0.1
3,586,206	-		Echvi_3000	0.84	-0.2
3,586,207	+		Echvi_3000	0.84	-0.9
3,586,213	+		Echvi_3000	0.84	+0.7
3,586,250	+		Echvi_3000	0.86	+0.0
3,586,317	-				-0.9
3,586,349	+				+0.1
3,586,367	-				-1.5
3,586,367	-				-2.2
3,586,403	-				+0.8
3,586,442	+				+0.9
3,586,495	+				-0.2
3,586,495	+				-1.3
3,586,496	-				+0.2
3,586,496	-				+1.1
3,586,496	-				-0.9
3,586,496	-				+0.2
3,586,568	+		Echvi_3001	0.25	+0.5
3,586,583	-		Echvi_3001	0.30	-0.7
3,586,600	-		Echvi_3001	0.37	+0.5
3,586,614	-		Echvi_3001	0.42	+0.7
3,586,683	+		Echvi_3001	0.67	+0.1
3,586,684	-		Echvi_3001	0.67	-0.2
3,586,714	+		Echvi_3001	0.78	+0.8
3,586,735	-		Echvi_3001	0.86	-0.5
3,586,735	-		Echvi_3001	0.86	-2.5
3,586,735	-		Echvi_3001	0.86	+1.2
3,586,749	-				+2.1
3,586,749	-				-1.8
3,586,790	-				+0.1
3,586,790	-				-1.8
3,586,809	+				+0.4
3,586,872	+				+1.5
3,586,990	+		Echvi_3002	0.18	+0.7
3,586,996	+		Echvi_3002	0.19	-0.6
3,586,996	+		Echvi_3002	0.19	-0.7
3,586,996	+		Echvi_3002	0.19	+0.6
3,587,060	+		Echvi_3002	0.26	-1.7
3,587,066	-		Echvi_3002	0.27	+1.2
3,587,137	+		Echvi_3002	0.34	+0.6
3,587,138	-		Echvi_3002	0.34	-0.3
3,587,181	-		Echvi_3002	0.39	-0.3
3,587,248	+		Echvi_3002	0.46	+0.9
3,587,252	+		Echvi_3002	0.47	+0.4
3,587,252	+		Echvi_3002	0.47	+0.2
3,587,252	+		Echvi_3002	0.47	+1.1
3,587,253	-		Echvi_3002	0.47	+0.5
3,587,275	-		Echvi_3002	0.49	-0.5
3,587,288	-		Echvi_3002	0.51	+2.1
3,587,301	-		Echvi_3002	0.52	-1.0
3,587,397	+		Echvi_3002	0.63	+1.7
3,587,397	+		Echvi_3002	0.63	-0.7
3,587,415	+		Echvi_3002	0.65	+1.2
3,587,416	-		Echvi_3002	0.65	-0.1
3,587,416	-		Echvi_3002	0.65	-1.5
3,587,473	-		Echvi_3002	0.71	+0.1
3,587,473	-		Echvi_3002	0.71	+2.1