Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2971

Experiment: L-Lysine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (N)
3,549,164	+		Echvi_2970	0.59	-0.2
3,549,201	+		Echvi_2970	0.61	-0.2
3,549,316	-		Echvi_2970	0.68	-0.9
3,549,316	-		Echvi_2970	0.68	-0.8
3,549,320	+		Echvi_2970	0.68	-0.2
3,549,320	+		Echvi_2970	0.68	-0.8
3,549,320	+		Echvi_2970	0.68	-1.7
3,549,341	+		Echvi_2970	0.70	+0.8
3,549,342	-		Echvi_2970	0.70	+0.4
3,549,345	-		Echvi_2970	0.70	+1.2
3,549,352	-		Echvi_2970	0.70	+0.1
3,549,387	+		Echvi_2970	0.73	-1.5
3,549,388	-		Echvi_2970	0.73	-1.6
3,549,393	+		Echvi_2970	0.73	+0.3
3,549,398	+		Echvi_2970	0.73	-1.4
3,549,468	+		Echvi_2970	0.78	+0.3
3,549,583	-		Echvi_2970	0.85	+0.6
3,549,632	+		Echvi_2970	0.88	+0.3
3,549,729	-				-0.2
3,549,789	-				-1.1
3,549,789	-				+0.3
3,549,819	-				+2.5
3,549,854	-				-0.1
3,549,900	+				-0.6
3,549,915	+				+0.5
3,549,918	+				+1.1
3,549,919	-				-0.6
3,549,920	+				+0.0
3,549,920	+				+0.9
3,550,010	-				+0.7
3,550,020	-				+0.4
3,550,061	+				+0.6
3,550,066	+				-0.2
3,550,091	+				+0.9
3,550,117	+				-1.1
3,550,123	-				+0.6
3,550,127	+				+2.1
3,550,254	+				-1.1
3,550,254	+				-1.0
3,550,269	+		Echvi_2971	0.11	-2.1
3,550,269	+		Echvi_2971	0.11	+1.0
3,550,270	-		Echvi_2971	0.11	-3.3
3,550,270	-		Echvi_2971	0.11	-3.4
3,550,344	-		Echvi_2971	0.17	-0.4
3,550,373	+		Echvi_2971	0.19	+0.1
3,550,384	-		Echvi_2971	0.20	-2.2
3,550,394	-		Echvi_2971	0.21	-1.7
3,550,395	+		Echvi_2971	0.21	-0.7
3,550,396	-		Echvi_2971	0.21	-0.2
3,550,433	-		Echvi_2971	0.24	-1.7
3,550,436	+		Echvi_2971	0.24	-1.6
3,550,459	+		Echvi_2971	0.26	-2.1
3,550,469	-		Echvi_2971	0.27	-1.5
3,550,492	+		Echvi_2971	0.29	-2.6
3,550,509	-		Echvi_2971	0.30	-1.5
3,550,547	-		Echvi_2971	0.33	-1.5
3,550,655	-		Echvi_2971	0.42	-1.4
3,550,666	+		Echvi_2971	0.43	+0.1
3,550,681	+		Echvi_2971	0.44	-2.1
3,550,681	+		Echvi_2971	0.44	-0.7
3,550,682	-		Echvi_2971	0.44	-1.8
3,550,682	-		Echvi_2971	0.44	-2.5
3,550,685	+		Echvi_2971	0.44	-3.9
3,550,685	+		Echvi_2971	0.44	-2.0
3,550,685	+		Echvi_2971	0.44	-1.1
3,550,685	+		Echvi_2971	0.44	-2.1
3,550,685	+		Echvi_2971	0.44	-1.2
3,550,685	+		Echvi_2971	0.44	-0.4
3,550,686	-		Echvi_2971	0.45	+0.8
3,550,686	-		Echvi_2971	0.45	+0.4
3,550,686	-		Echvi_2971	0.45	-1.8
3,550,686	-		Echvi_2971	0.45	-1.2
3,550,686	-		Echvi_2971	0.45	-0.9
3,550,686	-		Echvi_2971	0.45	-3.2
3,550,687	+		Echvi_2971	0.45	+0.1
3,550,687	+		Echvi_2971	0.45	-2.7
3,550,687	+		Echvi_2971	0.45	-2.6
3,550,688	-		Echvi_2971	0.45	-0.2
3,550,689	+		Echvi_2971	0.45	-0.4
3,550,710	+		Echvi_2971	0.47	-4.7
3,550,710	+		Echvi_2971	0.47	+0.5
3,550,715	-		Echvi_2971	0.47	-0.9
3,550,721	+		Echvi_2971	0.47	+0.1
3,550,722	-		Echvi_2971	0.48	-0.2
3,550,741	+		Echvi_2971	0.49	-3.6
3,550,741	+		Echvi_2971	0.49	-1.9
3,550,742	-		Echvi_2971	0.49	-0.2
3,550,750	+		Echvi_2971	0.50	-1.2
3,550,782	-		Echvi_2971	0.52	-1.4
3,550,900	+		Echvi_2971	0.62	-1.7
3,550,900	+		Echvi_2971	0.62	-1.1
3,550,901	-		Echvi_2971	0.62	-2.4
3,550,901	-		Echvi_2971	0.62	-1.5
3,550,924	+		Echvi_2971	0.64	-2.0
3,550,939	+		Echvi_2971	0.65	-0.2
3,550,939	+		Echvi_2971	0.65	-3.3
3,550,979	+		Echvi_2971	0.68	-0.7
3,551,021	+		Echvi_2971	0.72	-0.5
3,551,025	-		Echvi_2971	0.72	-0.3
3,551,041	-		Echvi_2971	0.74	-1.8
3,551,069	+		Echvi_2971	0.76	-1.3
3,551,069	+		Echvi_2971	0.76	-3.9
3,551,131	-		Echvi_2971	0.81	-1.1
3,551,131	-		Echvi_2971	0.81	-2.2
3,551,225	+		Echvi_2971	0.89	-1.8
3,551,233	-		Echvi_2971	0.89	-0.5
3,551,288	-				-1.7
3,551,292	-				-2.4
3,551,297	+				-2.8
3,551,314	+				-1.2
3,551,319	+				-0.2
3,551,319	+				-2.0
3,551,319	+				-1.4
3,551,320	-				-2.6
3,551,347	+				+0.6
3,551,347	+				-0.7
3,551,348	-				-1.3
3,551,348	-				-1.7
3,551,352	-				-1.8
3,551,352	-				-2.7
3,551,352	-				-1.2
3,551,366	-				-0.9
3,551,373	-				+0.1
3,551,376	+				-3.3
3,551,376	+				-0.5
3,551,405	+				-0.2
3,551,405	+				-0.7
3,551,405	+				-2.0
3,551,406	-				-1.3
3,551,406	-				-0.5
3,551,407	+				-1.7
3,551,416	+				-0.1
3,551,582	-		Echvi_2972	0.12	-1.5
3,551,597	+		Echvi_2972	0.13	+1.7
3,551,598	-		Echvi_2972	0.13	-0.7
3,551,601	-		Echvi_2972	0.13	+0.9
3,551,601	-		Echvi_2972	0.13	+0.5
3,551,601	-		Echvi_2972	0.13	-2.6
3,551,606	+		Echvi_2972	0.13	-0.9
3,551,606	+		Echvi_2972	0.13	-1.4
3,551,607	-		Echvi_2972	0.14	-1.5
3,551,614	+		Echvi_2972	0.14	+0.9
3,551,679	+		Echvi_2972	0.19	-1.1
3,551,684	+		Echvi_2972	0.19	-0.2
3,551,696	+		Echvi_2972	0.20	+0.1
3,551,696	+		Echvi_2972	0.20	+1.4
3,551,717	+		Echvi_2972	0.22	-2.2
3,551,717	+		Echvi_2972	0.22	-0.2
3,551,725	+		Echvi_2972	0.23	+0.7
3,551,730	+		Echvi_2972	0.23	-0.8
3,551,730	+		Echvi_2972	0.23	-0.9
3,551,730	+		Echvi_2972	0.23	-0.9
3,551,731	-		Echvi_2972	0.23	-1.8
3,551,732	+		Echvi_2972	0.23	+0.7
3,551,732	+		Echvi_2972	0.23	-0.5
3,551,733	-		Echvi_2972	0.23	+0.1
3,551,733	-		Echvi_2972	0.23	-2.8
3,551,733	-		Echvi_2972	0.23	-1.7
3,551,735	+		Echvi_2972	0.23	-0.4
3,551,735	+		Echvi_2972	0.23	-3.1
3,551,743	+		Echvi_2972	0.24	-1.4
3,551,752	+		Echvi_2972	0.25	-2.5
3,551,752	+		Echvi_2972	0.25	-1.4
3,551,752	+		Echvi_2972	0.25	-2.4
3,551,752	+		Echvi_2972	0.25	-2.3
3,551,752	+		Echvi_2972	0.25	-0.9
3,551,752	+		Echvi_2972	0.25	-0.2
3,551,752	+		Echvi_2972	0.25	-1.2
3,551,753	-		Echvi_2972	0.25	-0.1
3,551,756	+		Echvi_2972	0.25	-0.7
3,551,756	+		Echvi_2972	0.25	-1.9
3,551,756	+		Echvi_2972	0.25	-1.3
3,551,756	+		Echvi_2972	0.25	+2.3
3,551,756	+		Echvi_2972	0.25	-1.1
3,551,757	-		Echvi_2972	0.25	-1.5
3,551,757	-		Echvi_2972	0.25	-0.5
3,551,757	-		Echvi_2972	0.25	-2.6
3,551,757	-		Echvi_2972	0.25	-1.8
3,551,757	-		Echvi_2972	0.25	-1.1
3,551,757	-		Echvi_2972	0.25	-0.5
3,551,758	+		Echvi_2972	0.25	-1.6
3,551,758	+		Echvi_2972	0.25	-0.4
3,551,758	+		Echvi_2972	0.25	-1.3
3,551,759	-		Echvi_2972	0.25	-1.5
3,551,823	-		Echvi_2972	0.30	+0.1
3,551,825	+		Echvi_2972	0.30	-2.2
3,551,851	+		Echvi_2972	0.32	-2.1
3,551,884	-		Echvi_2972	0.35	-0.0
3,551,884	-		Echvi_2972	0.35	-3.9
3,551,888	-		Echvi_2972	0.35	-0.5
3,551,888	-		Echvi_2972	0.35	-0.9
3,551,904	+		Echvi_2972	0.37	+0.3
3,551,950	+		Echvi_2972	0.40	-0.5
3,551,951	-		Echvi_2972	0.40	-2.0
3,551,951	-		Echvi_2972	0.40	-3.0
3,551,978	-		Echvi_2972	0.42	-1.5
3,551,978	-		Echvi_2972	0.42	-1.6
3,552,005	+		Echvi_2972	0.44	-1.5
3,552,018	-		Echvi_2972	0.45	-1.9
3,552,102	-		Echvi_2972	0.52	-2.6
3,552,102	-		Echvi_2972	0.52	-0.9
3,552,123	-		Echvi_2972	0.53	-2.3
3,552,136	+		Echvi_2972	0.54	+0.0
3,552,136	+		Echvi_2972	0.54	-0.2
3,552,158	+		Echvi_2972	0.56	+0.3
3,552,182	+		Echvi_2972	0.58	-2.3
3,552,186	+		Echvi_2972	0.58	+0.3
3,552,187	-		Echvi_2972	0.58	-2.7
3,552,207	-		Echvi_2972	0.60	-1.4
3,552,218	+		Echvi_2972	0.61	-2.2
3,552,218	+		Echvi_2972	0.61	-1.2
3,552,218	+		Echvi_2972	0.61	-1.1
3,552,219	-		Echvi_2972	0.61	-0.6
3,552,219	-		Echvi_2972	0.61	-0.2
3,552,219	-		Echvi_2972	0.61	-0.4
3,552,222	+		Echvi_2972	0.61	-1.5
3,552,222	+		Echvi_2972	0.61	+1.4
3,552,222	+		Echvi_2972	0.61	-0.9
3,552,222	+		Echvi_2972	0.61	-0.1
3,552,223	-		Echvi_2972	0.61	-0.9
3,552,223	-		Echvi_2972	0.61	-0.8
3,552,229	+		Echvi_2972	0.62	-0.7
3,552,239	+		Echvi_2972	0.62	-0.2
3,552,268	-		Echvi_2972	0.65	-2.9
3,552,268	-		Echvi_2972	0.65	-0.3
3,552,283	+		Echvi_2972	0.66	-1.7
3,552,326	-		Echvi_2972	0.69	-1.0
3,552,343	-		Echvi_2972	0.70	-1.1
3,552,361	+		Echvi_2972	0.72	-1.1