Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2813

Experiment: L-Lysine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (N)
3,366,309	+		Echvi_2812	0.31	-0.0
3,366,310	-		Echvi_2812	0.31	-0.2
3,366,332	-		Echvi_2812	0.34	+0.5
3,366,332	-		Echvi_2812	0.34	+0.8
3,366,334	+		Echvi_2812	0.35	-2.5
3,366,356	+		Echvi_2812	0.38	-1.9
3,366,447	-		Echvi_2812	0.51	+1.0
3,366,482	+		Echvi_2812	0.57	-0.4
3,366,482	+		Echvi_2812	0.57	-1.5
3,366,531	-		Echvi_2812	0.64	-2.9
3,366,540	+		Echvi_2812	0.65	+0.4
3,366,577	+		Echvi_2812	0.71	+1.4
3,366,583	+		Echvi_2812	0.72	+1.2
3,366,584	-		Echvi_2812	0.72	-1.5
3,366,592	-		Echvi_2812	0.73	-0.4
3,366,592	-		Echvi_2812	0.73	-0.7
3,366,592	-		Echvi_2812	0.73	+2.4
3,366,650	+		Echvi_2812	0.81	-1.1
3,366,650	+		Echvi_2812	0.81	-1.1
3,366,651	-		Echvi_2812	0.82	-0.8
3,366,695	+		Echvi_2812	0.88	+1.0
3,366,695	+		Echvi_2812	0.88	+0.1
3,366,754	-				+2.3
3,366,810	-				-1.4
3,366,904	+				+0.7
3,366,909	+				-0.1
3,366,909	+				+0.8
3,366,933	+				-0.6
3,366,933	+				-1.1
3,366,934	-				+1.3
3,366,934	-				-1.2
3,366,934	-				-2.3
3,366,934	-				-0.0
3,366,945	+				+0.6
3,366,946	-				-1.9
3,366,964	+				+1.1
3,366,964	+				-0.1
3,366,965	-				-1.0
3,366,965	-				-1.3
3,366,978	+				+2.3
3,367,007	+				-0.7
3,367,008	-				-0.2
3,367,009	+				+0.1
3,367,009	+				+0.5
3,367,009	+				-3.0
3,367,010	-				+1.1
3,367,010	-				-0.5
3,367,010	-				+1.2
3,367,017	+				+0.4
3,367,042	+				+1.6
3,367,042	+				-0.1
3,367,107	+				+1.1
3,367,213	-				-1.0
3,367,217	+				+0.2
3,367,217	+				-0.6
3,367,217	+				+0.6
3,367,218	-				-0.7
3,367,218	-				+0.6
3,367,218	-				+1.9
3,367,229	+				-1.2
3,367,238	+				+0.2
3,367,273	+				+0.3
3,367,273	+				-1.4
3,367,273	+				-1.5
3,367,273	+				-0.5
3,367,364	-				+1.7
3,367,406	+				-0.2
3,367,407	-				+1.2
3,367,482	+		Echvi_2813	0.11	+1.8
3,367,482	+		Echvi_2813	0.11	-0.1
3,367,483	-		Echvi_2813	0.11	+0.4
3,367,483	-		Echvi_2813	0.11	-1.6
3,367,483	-		Echvi_2813	0.11	-0.5
3,367,513	+		Echvi_2813	0.12	+0.8
3,367,578	+		Echvi_2813	0.15	-0.3
3,367,590	-		Echvi_2813	0.15	+1.1
3,367,623	-		Echvi_2813	0.17	+0.8
3,367,645	+		Echvi_2813	0.18	+0.5
3,367,646	-		Echvi_2813	0.18	-2.2
3,367,653	+		Echvi_2813	0.18	-2.2
3,367,657	+		Echvi_2813	0.18	+0.3
3,367,657	+		Echvi_2813	0.18	-0.1
3,367,657	+		Echvi_2813	0.18	-1.2
3,367,657	+		Echvi_2813	0.18	-2.8
3,367,658	-		Echvi_2813	0.18	+0.3
3,367,658	-		Echvi_2813	0.18	+1.6
3,367,689	+		Echvi_2813	0.20	-0.2
3,367,690	-		Echvi_2813	0.20	-0.6
3,367,690	-		Echvi_2813	0.20	-0.4
3,367,690	-		Echvi_2813	0.20	+0.8
3,367,745	+		Echvi_2813	0.22	-0.1
3,367,778	-		Echvi_2813	0.23	-1.4
3,367,809	+		Echvi_2813	0.25	+1.4
3,367,810	-		Echvi_2813	0.25	+0.5
3,367,844	+		Echvi_2813	0.26	+2.4
3,367,845	-		Echvi_2813	0.26	-0.9
3,367,845	-		Echvi_2813	0.26	-0.2
3,367,848	+		Echvi_2813	0.26	+0.1
3,367,849	-		Echvi_2813	0.26	+0.1
3,367,849	-		Echvi_2813	0.26	-0.1
3,367,879	+		Echvi_2813	0.28	-0.1
3,367,910	+		Echvi_2813	0.29	-1.5
3,367,911	-		Echvi_2813	0.29	+1.9
3,367,924	+		Echvi_2813	0.30	+1.8
3,367,924	+		Echvi_2813	0.30	-0.2
3,367,977	-		Echvi_2813	0.32	-0.5
3,367,977	-		Echvi_2813	0.32	+1.5
3,367,977	-		Echvi_2813	0.32	+0.8
3,367,977	-		Echvi_2813	0.32	-0.2
3,368,007	+		Echvi_2813	0.33	+0.8
3,368,007	+		Echvi_2813	0.33	-2.3
3,368,181	-		Echvi_2813	0.41	+0.2
3,368,199	+		Echvi_2813	0.42	+0.5
3,368,221	-		Echvi_2813	0.43	+0.6
3,368,221	-		Echvi_2813	0.43	-0.9
3,368,221	-		Echvi_2813	0.43	+2.7
3,368,221	-		Echvi_2813	0.43	-0.4
3,368,384	-		Echvi_2813	0.50	-0.2
3,368,392	+		Echvi_2813	0.50	-2.2
3,368,392	+		Echvi_2813	0.50	-0.5
3,368,392	+		Echvi_2813	0.50	+1.5
3,368,392	+		Echvi_2813	0.50	-1.0
3,368,392	+		Echvi_2813	0.50	+1.4
3,368,393	-		Echvi_2813	0.50	-0.2
3,368,393	-		Echvi_2813	0.50	-1.1
3,368,393	-		Echvi_2813	0.50	+0.7
3,368,393	-		Echvi_2813	0.50	+0.6
3,368,393	-		Echvi_2813	0.50	-1.2
3,368,505	+		Echvi_2813	0.55	+0.5
3,368,566	+		Echvi_2813	0.58	+0.3
3,368,566	+		Echvi_2813	0.58	+0.1
3,368,567	-		Echvi_2813	0.58	-1.2
3,368,567	-		Echvi_2813	0.58	+1.4
3,368,583	-		Echvi_2813	0.58	+1.3
3,368,634	+		Echvi_2813	0.60	-0.0
3,368,644	-		Echvi_2813	0.61	-0.7
3,368,644	-		Echvi_2813	0.61	+1.0
3,368,817	+				+1.7
3,368,817	+		Echvi_2813	0.68	-1.1
3,368,842	-		Echvi_2813	0.69	-0.2
3,368,842	-		Echvi_2813	0.69	+0.8
3,368,876	-		Echvi_2813	0.71	+0.0
3,369,078	-		Echvi_2813	0.80	+2.4
3,369,183	-		Echvi_2813	0.84	+1.1
3,369,222	+		Echvi_2813	0.86	+2.3
3,369,223	-		Echvi_2813	0.86	+1.4
3,369,223	-		Echvi_2813	0.86	+0.8
3,369,227	-		Echvi_2813	0.86	+0.2
3,369,227	-		Echvi_2813	0.86	-1.0
3,369,236	+		Echvi_2813	0.87	-1.8
3,369,273	+		Echvi_2813	0.88	-1.1
3,369,273	+		Echvi_2813	0.88	+0.6
3,369,273	+		Echvi_2813	0.88	+0.7
3,369,274	-		Echvi_2813	0.88	+1.2
3,369,446	+				+4.3
3,369,449	-				-0.6
3,369,544	-				+2.1
3,369,550	+				+1.5
3,369,551	-				-0.2
3,369,645	+				-0.6
3,369,645	+				+0.6
3,369,646	-				+0.3
3,369,646	-				-1.1
3,369,646	-				-0.5
3,369,647	+				+0.5
3,369,647	+				+0.1
3,369,647	+				+0.4
3,369,647	+				-0.4
3,369,778	-				+1.3
3,369,839	+		Echvi_2814	0.13	+0.5
3,369,882	+		Echvi_2814	0.15	+2.3
3,369,939	+		Echvi_2814	0.18	+1.6
3,369,939	+		Echvi_2814	0.18	+1.1
3,369,940	-		Echvi_2814	0.18	+1.4
3,369,940	-		Echvi_2814	0.18	+1.8
3,370,168	+		Echvi_2814	0.29	-0.2
3,370,169	-		Echvi_2814	0.30	-0.5
3,370,393	+		Echvi_2814	0.41	-2.7
3,370,394	-		Echvi_2814	0.41	-1.8
3,370,512	+		Echvi_2814	0.47	-0.7
3,370,512	+		Echvi_2814	0.47	+1.1