Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1750 and Echvi_1751 are separated by 6 nucleotides Echvi_1751 and Echvi_1752 are separated by 118 nucleotides Echvi_1752 and Echvi_1753 are separated by 507 nucleotides
Echvi_1750: Echvi_1750 - Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit, at 2,060,496 to 2,062,481
_1750
Echvi_1751: Echvi_1751 - Uncharacterized Fe-S protein, at 2,062,488 to 2,063,285
_1751
Echvi_1752: Echvi_1752 - hypothetical protein, at 2,063,404 to 2,063,634
_1752
Echvi_1753: Echvi_1753 - chaperone protein DnaK, at 2,064,142 to 2,066,082
_1753
Position (kb)
2062
2063
2064 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2061.565 kb on + strand, within Echvi_1750 at 2061.619 kb on - strand, within Echvi_1750 at 2061.619 kb on - strand, within Echvi_1750 at 2061.692 kb on - strand, within Echvi_1750 at 2061.692 kb on - strand, within Echvi_1750 at 2061.779 kb on - strand, within Echvi_1750 at 2061.908 kb on + strand, within Echvi_1750 at 2062.031 kb on + strand, within Echvi_1750 at 2062.031 kb on + strand, within Echvi_1750 at 2062.031 kb on + strand, within Echvi_1750 at 2062.031 kb on + strand, within Echvi_1750 at 2062.031 kb on + strand, within Echvi_1750 at 2062.031 kb on + strand, within Echvi_1750 at 2062.032 kb on - strand, within Echvi_1750 at 2062.032 kb on - strand, within Echvi_1750 at 2062.032 kb on - strand, within Echvi_1750 at 2062.055 kb on - strand, within Echvi_1750 at 2062.075 kb on - strand, within Echvi_1750 at 2062.075 kb on - strand, within Echvi_1750 at 2062.077 kb on + strand, within Echvi_1750 at 2062.078 kb on - strand, within Echvi_1750 at 2062.078 kb on - strand, within Echvi_1750 at 2062.079 kb on + strand, within Echvi_1750 at 2062.140 kb on + strand, within Echvi_1750 at 2062.140 kb on + strand, within Echvi_1750 at 2062.140 kb on + strand, within Echvi_1750 at 2062.274 kb on - strand, within Echvi_1750 at 2062.274 kb on - strand, within Echvi_1750 at 2062.274 kb on - strand, within Echvi_1750 at 2062.418 kb on - strand at 2062.455 kb on - strand at 2062.589 kb on + strand, within Echvi_1751 at 2062.589 kb on + strand, within Echvi_1751 at 2062.685 kb on + strand, within Echvi_1751 at 2062.685 kb on + strand, within Echvi_1751 at 2062.685 kb on + strand, within Echvi_1751 at 2062.695 kb on + strand, within Echvi_1751 at 2062.696 kb on - strand, within Echvi_1751 at 2062.704 kb on - strand, within Echvi_1751 at 2062.834 kb on + strand, within Echvi_1751 at 2062.966 kb on - strand, within Echvi_1751 at 2063.086 kb on - strand, within Echvi_1751 at 2063.086 kb on - strand, within Echvi_1751 at 2063.121 kb on + strand, within Echvi_1751 at 2063.121 kb on + strand, within Echvi_1751 at 2063.210 kb on + strand at 2063.211 kb on - strand at 2063.211 kb on - strand at 2063.211 kb on - strand at 2063.225 kb on + strand at 2063.225 kb on + strand at 2063.226 kb on - strand at 2063.226 kb on - strand at 2063.230 kb on - strand at 2063.260 kb on + strand at 2063.261 kb on - strand at 2063.261 kb on - strand at 2063.266 kb on + strand at 2063.267 kb on - strand at 2063.267 kb on - strand at 2063.267 kb on - strand at 2063.267 kb on - strand at 2063.267 kb on - strand at 2063.269 kb on - strand at 2063.297 kb on - strand at 2063.304 kb on + strand at 2063.370 kb on + strand at 2063.371 kb on - strand at 2063.371 kb on - strand at 2063.470 kb on + strand, within Echvi_1752 at 2063.520 kb on + strand, within Echvi_1752 at 2063.521 kb on - strand, within Echvi_1752 at 2063.590 kb on + strand, within Echvi_1752 at 2063.591 kb on - strand, within Echvi_1752 at 2063.604 kb on + strand, within Echvi_1752 at 2063.605 kb on - strand, within Echvi_1752 at 2063.605 kb on - strand, within Echvi_1752 at 2063.717 kb on + strand at 2063.738 kb on + strand at 2063.799 kb on + strand at 2063.837 kb on + strand at 2063.926 kb on + strand at 2063.926 kb on + strand at 2063.927 kb on - strand at 2063.927 kb on - strand at 2063.927 kb on - strand at 2063.989 kb on + strand at 2064.095 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 2,061,565 + Echvi_1750 0.54 -1.4 2,061,619 - Echvi_1750 0.57 +1.8 2,061,619 - Echvi_1750 0.57 +1.8 2,061,692 - Echvi_1750 0.60 +1.1 2,061,692 - Echvi_1750 0.60 -1.5 2,061,779 - Echvi_1750 0.65 +1.3 2,061,908 + Echvi_1750 0.71 +1.1 2,062,031 + Echvi_1750 0.77 -0.3 2,062,031 + Echvi_1750 0.77 +0.4 2,062,031 + Echvi_1750 0.77 +1.0 2,062,031 + Echvi_1750 0.77 +0.4 2,062,031 + Echvi_1750 0.77 +1.1 2,062,031 + Echvi_1750 0.77 -0.3 2,062,032 - Echvi_1750 0.77 +1.1 2,062,032 - Echvi_1750 0.77 +1.1 2,062,032 - Echvi_1750 0.77 +1.8 2,062,055 - Echvi_1750 0.78 +2.7 2,062,075 - Echvi_1750 0.80 +1.3 2,062,075 - Echvi_1750 0.80 -1.1 2,062,077 + Echvi_1750 0.80 -1.8 2,062,078 - Echvi_1750 0.80 +1.0 2,062,078 - Echvi_1750 0.80 +1.1 2,062,079 + Echvi_1750 0.80 -0.6 2,062,140 + Echvi_1750 0.83 +0.7 2,062,140 + Echvi_1750 0.83 -0.2 2,062,140 + Echvi_1750 0.83 -0.9 2,062,274 - Echvi_1750 0.90 +2.7 2,062,274 - Echvi_1750 0.90 +1.7 2,062,274 - Echvi_1750 0.90 +0.1 2,062,418 - +1.8 2,062,455 - -1.6 2,062,589 + Echvi_1751 0.13 +1.3 2,062,589 + Echvi_1751 0.13 +0.5 2,062,685 + Echvi_1751 0.25 +0.0 2,062,685 + Echvi_1751 0.25 +1.1 2,062,685 + Echvi_1751 0.25 +1.0 2,062,695 + Echvi_1751 0.26 +0.1 2,062,696 - Echvi_1751 0.26 +0.9 2,062,704 - Echvi_1751 0.27 +2.5 2,062,834 + Echvi_1751 0.43 +0.5 2,062,966 - Echvi_1751 0.60 +0.2 2,063,086 - Echvi_1751 0.75 +0.5 2,063,086 - Echvi_1751 0.75 +0.1 2,063,121 + Echvi_1751 0.79 -1.2 2,063,121 + Echvi_1751 0.79 -1.1 2,063,210 + -0.1 2,063,211 - +1.7 2,063,211 - +2.0 2,063,211 - -0.5 2,063,225 + -2.0 2,063,225 + -0.7 2,063,226 - -0.5 2,063,226 - +1.6 2,063,230 - -1.4 2,063,260 + -2.6 2,063,261 - +1.7 2,063,261 - +1.1 2,063,266 + +0.6 2,063,267 - +1.4 2,063,267 - +1.6 2,063,267 - +2.1 2,063,267 - +0.9 2,063,267 - +2.7 2,063,269 - -0.4 2,063,297 - +0.6 2,063,304 + +2.1 2,063,370 + +0.3 2,063,371 - +1.1 2,063,371 - +2.4 2,063,470 + Echvi_1752 0.29 -0.8 2,063,520 + Echvi_1752 0.50 -1.2 2,063,521 - Echvi_1752 0.51 -0.2 2,063,590 + Echvi_1752 0.81 +0.2 2,063,591 - Echvi_1752 0.81 +1.0 2,063,604 + Echvi_1752 0.87 -0.2 2,063,605 - Echvi_1752 0.87 +1.9 2,063,605 - Echvi_1752 0.87 +1.9 2,063,717 + -0.5 2,063,738 + -0.7 2,063,799 + +0.7 2,063,837 + -1.0 2,063,926 + -0.2 2,063,926 + -0.2 2,063,927 - +0.2 2,063,927 - +1.1 2,063,927 - -0.4 2,063,989 + +0.2 2,064,095 + +1.9
Or see this region's nucleotide sequence