Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0688 and Echvi_0689 are separated by 77 nucleotides Echvi_0689 and Echvi_0690 are separated by 587 nucleotides Echvi_0690 and Echvi_0691 are separated by 119 nucleotides
Echvi_0688: Echvi_0688 - Adhesion protein FadA., at 777,653 to 778,117
_0688
Echvi_0689: Echvi_0689 - hypothetical protein, at 778,195 to 778,311
_0689
Echvi_0690: Echvi_0690 - hypothetical protein, at 778,899 to 779,273
_0690
Echvi_0691: Echvi_0691 - Dipeptidyl aminopeptidases/acylaminoacyl-peptidases, at 779,393 to 781,570
_0691
Position (kb) 778
779
780 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 777.910 kb on + strand, within Echvi_0688 at 777.910 kb on + strand, within Echvi_0688 at 777.956 kb on - strand, within Echvi_0688 at 778.101 kb on - strand at 778.108 kb on - strand at 778.111 kb on + strand at 778.112 kb on - strand at 778.117 kb on + strand at 778.117 kb on + strand at 778.118 kb on - strand at 778.139 kb on + strand at 778.150 kb on - strand at 778.196 kb on + strand at 778.322 kb on + strand at 778.346 kb on + strand at 778.346 kb on + strand at 778.416 kb on + strand at 778.460 kb on - strand at 778.464 kb on - strand at 778.535 kb on - strand at 778.535 kb on - strand at 778.536 kb on + strand at 778.536 kb on + strand at 778.537 kb on - strand at 778.537 kb on - strand at 778.566 kb on + strand at 778.566 kb on + strand at 778.566 kb on + strand at 778.568 kb on + strand at 778.569 kb on - strand at 778.569 kb on - strand at 778.569 kb on - strand at 778.569 kb on - strand at 778.570 kb on + strand at 778.570 kb on + strand at 778.570 kb on + strand at 778.570 kb on + strand at 778.571 kb on - strand at 778.571 kb on - strand at 778.571 kb on - strand at 778.592 kb on + strand at 778.593 kb on - strand at 778.593 kb on - strand at 778.593 kb on - strand at 778.593 kb on - strand at 778.594 kb on + strand at 778.594 kb on + strand at 778.594 kb on + strand at 778.594 kb on + strand at 778.594 kb on + strand at 778.594 kb on + strand at 778.595 kb on - strand at 778.595 kb on - strand at 778.627 kb on + strand at 778.627 kb on + strand at 778.628 kb on - strand at 778.628 kb on - strand at 778.633 kb on + strand at 778.651 kb on + strand at 778.652 kb on - strand at 778.660 kb on - strand at 778.660 kb on - strand at 778.691 kb on + strand at 778.722 kb on + strand at 778.723 kb on - strand at 778.724 kb on + strand at 778.724 kb on + strand at 778.725 kb on - strand at 778.732 kb on + strand at 778.747 kb on + strand at 778.747 kb on + strand at 778.753 kb on + strand at 778.754 kb on - strand at 778.754 kb on - strand at 778.788 kb on - strand at 778.805 kb on + strand at 778.900 kb on + strand at 778.900 kb on + strand at 778.953 kb on - strand, within Echvi_0690 at 778.956 kb on - strand, within Echvi_0690 at 778.978 kb on + strand, within Echvi_0690 at 778.978 kb on + strand, within Echvi_0690 at 779.051 kb on + strand, within Echvi_0690 at 779.052 kb on - strand, within Echvi_0690 at 779.055 kb on + strand, within Echvi_0690 at 779.055 kb on + strand, within Echvi_0690 at 779.056 kb on - strand, within Echvi_0690 at 779.084 kb on + strand, within Echvi_0690 at 779.085 kb on - strand, within Echvi_0690 at 779.085 kb on - strand, within Echvi_0690 at 779.088 kb on - strand, within Echvi_0690 at 779.131 kb on - strand, within Echvi_0690 at 779.161 kb on + strand, within Echvi_0690 at 779.194 kb on + strand, within Echvi_0690 at 779.195 kb on - strand, within Echvi_0690 at 779.277 kb on + strand at 779.278 kb on - strand at 779.278 kb on - strand at 779.297 kb on + strand at 779.297 kb on + strand at 779.350 kb on + strand at 779.351 kb on - strand at 779.359 kb on + strand at 779.359 kb on + strand at 779.395 kb on - strand at 779.395 kb on - strand at 779.430 kb on + strand at 779.430 kb on + strand at 779.431 kb on - strand at 779.457 kb on + strand at 779.473 kb on + strand at 779.484 kb on + strand at 779.485 kb on - strand at 779.485 kb on - strand at 779.516 kb on + strand at 779.569 kb on + strand at 779.614 kb on + strand, within Echvi_0691 at 779.615 kb on - strand, within Echvi_0691 at 779.624 kb on - strand, within Echvi_0691 at 779.624 kb on - strand, within Echvi_0691 at 779.624 kb on - strand, within Echvi_0691 at 779.626 kb on - strand, within Echvi_0691 at 779.626 kb on - strand, within Echvi_0691 at 779.626 kb on - strand, within Echvi_0691 at 779.626 kb on - strand, within Echvi_0691 at 779.667 kb on + strand, within Echvi_0691 at 779.668 kb on - strand, within Echvi_0691 at 779.678 kb on - strand, within Echvi_0691 at 779.680 kb on - strand, within Echvi_0691 at 779.691 kb on + strand, within Echvi_0691 at 779.691 kb on + strand, within Echvi_0691 at 779.692 kb on - strand, within Echvi_0691 at 779.694 kb on + strand, within Echvi_0691 at 779.695 kb on - strand, within Echvi_0691 at 779.695 kb on - strand, within Echvi_0691 at 779.695 kb on - strand, within Echvi_0691 at 779.756 kb on - strand, within Echvi_0691 at 779.775 kb on + strand, within Echvi_0691 at 779.775 kb on + strand, within Echvi_0691 at 779.776 kb on - strand, within Echvi_0691 at 779.824 kb on - strand, within Echvi_0691 at 779.856 kb on - strand, within Echvi_0691 at 779.892 kb on + strand, within Echvi_0691 at 779.892 kb on + strand, within Echvi_0691 at 779.892 kb on + strand, within Echvi_0691 at 779.999 kb on - strand, within Echvi_0691 at 780.048 kb on + strand, within Echvi_0691 at 780.048 kb on + strand, within Echvi_0691 at 780.049 kb on - strand, within Echvi_0691 at 780.057 kb on - strand, within Echvi_0691 at 780.057 kb on - strand, within Echvi_0691 at 780.095 kb on - strand, within Echvi_0691 at 780.100 kb on + strand, within Echvi_0691 at 780.100 kb on + strand, within Echvi_0691 at 780.100 kb on + strand, within Echvi_0691 at 780.101 kb on - strand, within Echvi_0691 at 780.101 kb on - strand, within Echvi_0691 at 780.103 kb on - strand, within Echvi_0691 at 780.103 kb on - strand, within Echvi_0691 at 780.103 kb on - strand, within Echvi_0691 at 780.166 kb on - strand, within Echvi_0691 at 780.185 kb on + strand, within Echvi_0691 at 780.185 kb on + strand, within Echvi_0691 at 780.193 kb on + strand, within Echvi_0691 at 780.193 kb on + strand, within Echvi_0691 at 780.236 kb on + strand, within Echvi_0691
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 777,910 + Echvi_0688 0.55 +1.7 777,910 + Echvi_0688 0.55 -0.3 777,956 - Echvi_0688 0.65 +0.1 778,101 - -0.3 778,108 - +0.9 778,111 + +0.7 778,112 - -0.7 778,117 + +0.5 778,117 + +0.1 778,118 - -0.1 778,139 + +0.3 778,150 - +1.0 778,196 + -1.4 778,322 + -0.4 778,346 + -0.4 778,346 + +0.3 778,416 + -0.2 778,460 - -0.3 778,464 - +0.0 778,535 - +1.2 778,535 - -0.4 778,536 + -0.2 778,536 + -2.8 778,537 - -1.0 778,537 - +1.1 778,566 + -2.9 778,566 + -0.5 778,566 + -1.7 778,568 + -0.1 778,569 - +0.6 778,569 - -0.4 778,569 - +0.0 778,569 - +0.4 778,570 + -0.9 778,570 + -0.7 778,570 + -0.2 778,570 + -2.7 778,571 - +0.6 778,571 - +0.6 778,571 - +0.4 778,592 + -0.8 778,593 - +0.9 778,593 - +0.1 778,593 - -0.1 778,593 - +0.8 778,594 + -0.2 778,594 + -0.1 778,594 + -0.8 778,594 + -2.7 778,594 + +0.1 778,594 + -0.6 778,595 - +0.3 778,595 - -0.2 778,627 + -2.1 778,627 + -0.4 778,628 - -1.8 778,628 - -0.3 778,633 + +0.2 778,651 + +2.1 778,652 - -0.3 778,660 - +0.7 778,660 - -1.9 778,691 + -0.2 778,722 + -0.8 778,723 - +1.1 778,724 + -0.3 778,724 + -0.9 778,725 - +0.3 778,732 + -1.2 778,747 + -2.8 778,747 + -0.7 778,753 + +0.6 778,754 - -0.7 778,754 - -0.4 778,788 - +0.8 778,805 + -0.0 778,900 + -0.0 778,900 + -0.4 778,953 - Echvi_0690 0.14 -1.1 778,956 - Echvi_0690 0.15 +0.4 778,978 + Echvi_0690 0.21 -1.0 778,978 + Echvi_0690 0.21 -1.0 779,051 + Echvi_0690 0.41 +1.4 779,052 - Echvi_0690 0.41 -0.4 779,055 + Echvi_0690 0.42 -0.2 779,055 + Echvi_0690 0.42 +1.3 779,056 - Echvi_0690 0.42 -0.2 779,084 + Echvi_0690 0.49 -2.9 779,085 - Echvi_0690 0.50 +0.1 779,085 - Echvi_0690 0.50 -0.9 779,088 - Echvi_0690 0.50 -1.2 779,131 - Echvi_0690 0.62 +0.1 779,161 + Echvi_0690 0.70 -1.5 779,194 + Echvi_0690 0.79 -1.8 779,195 - Echvi_0690 0.79 -2.1 779,277 + -2.3 779,278 - -1.4 779,278 - +1.1 779,297 + -3.0 779,297 + +0.1 779,350 + -1.3 779,351 - -1.4 779,359 + -0.7 779,359 + -0.9 779,395 - +0.8 779,395 - -1.1 779,430 + -2.5 779,430 + -2.1 779,431 - -0.3 779,457 + -0.4 779,473 + -2.2 779,484 + -0.0 779,485 - -1.2 779,485 - -1.9 779,516 + -3.2 779,569 + -2.1 779,614 + Echvi_0691 0.10 -2.3 779,615 - Echvi_0691 0.10 -0.8 779,624 - Echvi_0691 0.11 -3.9 779,624 - Echvi_0691 0.11 -1.6 779,624 - Echvi_0691 0.11 -2.4 779,626 - Echvi_0691 0.11 -1.3 779,626 - Echvi_0691 0.11 -0.7 779,626 - Echvi_0691 0.11 -1.4 779,626 - Echvi_0691 0.11 -1.0 779,667 + Echvi_0691 0.13 -2.2 779,668 - Echvi_0691 0.13 -1.0 779,678 - Echvi_0691 0.13 -1.0 779,680 - Echvi_0691 0.13 -1.5 779,691 + Echvi_0691 0.14 +1.9 779,691 + Echvi_0691 0.14 +1.1 779,692 - Echvi_0691 0.14 -1.1 779,694 + Echvi_0691 0.14 -1.6 779,695 - Echvi_0691 0.14 -0.7 779,695 - Echvi_0691 0.14 -1.3 779,695 - Echvi_0691 0.14 -2.4 779,756 - Echvi_0691 0.17 -1.2 779,775 + Echvi_0691 0.18 -0.7 779,775 + Echvi_0691 0.18 -2.7 779,776 - Echvi_0691 0.18 -0.2 779,824 - Echvi_0691 0.20 -0.4 779,856 - Echvi_0691 0.21 -1.4 779,892 + Echvi_0691 0.23 -1.0 779,892 + Echvi_0691 0.23 -1.8 779,892 + Echvi_0691 0.23 -2.0 779,999 - Echvi_0691 0.28 -1.5 780,048 + Echvi_0691 0.30 -0.8 780,048 + Echvi_0691 0.30 -1.4 780,049 - Echvi_0691 0.30 +2.2 780,057 - Echvi_0691 0.30 -1.8 780,057 - Echvi_0691 0.30 -1.6 780,095 - Echvi_0691 0.32 +1.0 780,100 + Echvi_0691 0.32 -0.4 780,100 + Echvi_0691 0.32 -0.2 780,100 + Echvi_0691 0.32 -1.9 780,101 - Echvi_0691 0.33 -1.6 780,101 - Echvi_0691 0.33 -0.7 780,103 - Echvi_0691 0.33 +0.3 780,103 - Echvi_0691 0.33 -2.2 780,103 - Echvi_0691 0.33 -3.7 780,166 - Echvi_0691 0.35 -1.5 780,185 + Echvi_0691 0.36 -0.5 780,185 + Echvi_0691 0.36 -1.3 780,193 + Echvi_0691 0.37 -0.6 780,193 + Echvi_0691 0.37 -2.8 780,236 + Echvi_0691 0.39 -0.3
Or see this region's nucleotide sequence