Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0675 and Echvi_0676 are separated by 165 nucleotides Echvi_0676 and Echvi_0677 overlap by 4 nucleotides Echvi_0677 and Echvi_0678 are separated by 999 nucleotides
Echvi_0675: Echvi_0675 - Aspartate/tyrosine/aromatic aminotransferase, at 757,070 to 758,272
_0675
Echvi_0676: Echvi_0676 - Predicted glycosyltransferases, at 758,438 to 759,148
_0676
Echvi_0677: Echvi_0677 - Glycosyltransferases involved in cell wall biogenesis, at 759,145 to 759,939
_0677
Echvi_0678: Echvi_0678 - hypothetical protein, at 760,939 to 761,160
_0678
Position (kb) 759
760 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 758.266 kb on + strand at 758.266 kb on + strand at 758.267 kb on - strand at 758.267 kb on - strand at 758.267 kb on - strand at 758.267 kb on - strand at 758.299 kb on + strand at 758.304 kb on - strand at 758.376 kb on + strand at 758.454 kb on + strand at 758.455 kb on - strand at 758.455 kb on - strand at 758.458 kb on + strand at 758.459 kb on - strand at 758.459 kb on - strand at 758.459 kb on - strand at 758.518 kb on + strand, within Echvi_0676 at 758.607 kb on - strand, within Echvi_0676 at 758.719 kb on - strand, within Echvi_0676 at 758.730 kb on + strand, within Echvi_0676 at 758.730 kb on + strand, within Echvi_0676 at 758.800 kb on - strand, within Echvi_0676 at 758.800 kb on - strand, within Echvi_0676 at 758.814 kb on + strand, within Echvi_0676 at 758.819 kb on + strand, within Echvi_0676 at 758.819 kb on + strand, within Echvi_0676 at 758.848 kb on + strand, within Echvi_0676 at 758.939 kb on + strand, within Echvi_0676 at 758.939 kb on + strand, within Echvi_0676 at 758.947 kb on + strand, within Echvi_0676 at 758.947 kb on + strand, within Echvi_0676 at 758.947 kb on + strand, within Echvi_0676 at 758.948 kb on - strand, within Echvi_0676 at 758.975 kb on + strand, within Echvi_0676 at 758.986 kb on + strand, within Echvi_0676 at 758.986 kb on + strand, within Echvi_0676 at 759.090 kb on - strand at 759.107 kb on + strand at 759.110 kb on + strand at 759.151 kb on + strand at 759.151 kb on + strand at 759.152 kb on - strand at 759.166 kb on + strand at 759.166 kb on + strand at 759.178 kb on - strand at 759.178 kb on - strand at 759.179 kb on + strand at 759.180 kb on - strand at 759.208 kb on + strand at 759.259 kb on - strand, within Echvi_0677 at 759.332 kb on + strand, within Echvi_0677 at 759.333 kb on - strand, within Echvi_0677 at 759.333 kb on - strand, within Echvi_0677 at 759.333 kb on - strand, within Echvi_0677 at 759.434 kb on + strand, within Echvi_0677 at 759.435 kb on - strand, within Echvi_0677 at 759.438 kb on + strand, within Echvi_0677 at 759.438 kb on + strand, within Echvi_0677 at 759.439 kb on - strand, within Echvi_0677 at 759.439 kb on - strand, within Echvi_0677 at 759.490 kb on - strand, within Echvi_0677 at 759.526 kb on + strand, within Echvi_0677 at 759.527 kb on - strand, within Echvi_0677 at 759.527 kb on - strand, within Echvi_0677 at 759.570 kb on + strand, within Echvi_0677 at 759.570 kb on + strand, within Echvi_0677 at 759.571 kb on - strand, within Echvi_0677 at 759.575 kb on + strand, within Echvi_0677 at 759.575 kb on + strand, within Echvi_0677 at 759.608 kb on - strand, within Echvi_0677 at 759.608 kb on - strand, within Echvi_0677 at 759.614 kb on - strand, within Echvi_0677 at 759.629 kb on + strand, within Echvi_0677 at 759.630 kb on - strand, within Echvi_0677 at 759.630 kb on - strand, within Echvi_0677 at 759.658 kb on + strand, within Echvi_0677 at 759.672 kb on + strand, within Echvi_0677 at 759.673 kb on - strand, within Echvi_0677 at 759.673 kb on - strand, within Echvi_0677 at 759.745 kb on - strand, within Echvi_0677 at 759.745 kb on - strand, within Echvi_0677 at 759.798 kb on + strand, within Echvi_0677 at 759.798 kb on + strand, within Echvi_0677 at 759.799 kb on - strand, within Echvi_0677 at 759.799 kb on - strand, within Echvi_0677 at 759.821 kb on - strand, within Echvi_0677 at 759.827 kb on - strand, within Echvi_0677 at 759.837 kb on - strand, within Echvi_0677 at 759.837 kb on - strand, within Echvi_0677 at 759.876 kb on - strand at 759.876 kb on - strand at 759.890 kb on + strand at 759.890 kb on + strand at 759.891 kb on - strand at 759.910 kb on + strand at 759.978 kb on + strand at 760.005 kb on - strand at 760.009 kb on + strand at 760.018 kb on + strand at 760.019 kb on - strand at 760.025 kb on - strand at 760.025 kb on - strand at 760.028 kb on + strand at 760.028 kb on + strand at 760.028 kb on + strand at 760.029 kb on - strand at 760.031 kb on + strand at 760.032 kb on - strand at 760.071 kb on + strand at 760.129 kb on + strand at 760.137 kb on + strand at 760.138 kb on - strand at 760.155 kb on + strand at 760.160 kb on - strand at 760.230 kb on + strand at 760.242 kb on + strand at 760.286 kb on + strand at 760.287 kb on - strand at 760.287 kb on - strand at 760.290 kb on + strand at 760.290 kb on + strand at 760.347 kb on - strand at 760.353 kb on - strand at 760.359 kb on - strand at 760.361 kb on - strand at 760.367 kb on - strand at 760.519 kb on - strand at 760.527 kb on + strand at 760.528 kb on - strand at 760.528 kb on - strand at 760.563 kb on - strand at 760.580 kb on - strand at 760.588 kb on - strand at 760.652 kb on + strand at 760.653 kb on - strand at 760.696 kb on + strand at 760.697 kb on - strand at 760.719 kb on - strand at 760.782 kb on + strand at 760.782 kb on + strand at 760.783 kb on - strand at 760.784 kb on + strand at 760.784 kb on + strand at 760.784 kb on + strand at 760.784 kb on + strand at 760.785 kb on - strand at 760.785 kb on - strand at 760.785 kb on - strand at 760.785 kb on - strand at 760.785 kb on - strand at 760.788 kb on + strand at 760.788 kb on + strand at 760.789 kb on - strand at 760.789 kb on - strand at 760.791 kb on + strand at 760.794 kb on + strand at 760.794 kb on + strand at 760.794 kb on + strand at 760.794 kb on + strand at 760.794 kb on + strand at 760.794 kb on + strand at 760.794 kb on + strand at 760.794 kb on + strand at 760.794 kb on + strand at 760.794 kb on + strand at 760.795 kb on - strand at 760.795 kb on - strand at 760.795 kb on - strand at 760.795 kb on - strand at 760.795 kb on - strand at 760.796 kb on + strand at 760.796 kb on + strand at 760.796 kb on + strand at 760.796 kb on + strand at 760.797 kb on - strand at 760.859 kb on + strand at 760.871 kb on - strand at 760.874 kb on + strand at 760.874 kb on + strand at 760.874 kb on + strand at 760.875 kb on - strand at 760.875 kb on - strand at 760.875 kb on - strand at 760.875 kb on - strand at 760.875 kb on - strand at 760.875 kb on - strand at 760.875 kb on - strand at 760.877 kb on - strand at 760.893 kb on - strand at 760.893 kb on - strand at 760.908 kb on - strand at 760.919 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 758,266 + -0.2 758,266 + +0.3 758,267 - -1.8 758,267 - -2.9 758,267 - -0.2 758,267 - -1.9 758,299 + -3.0 758,304 - -1.0 758,376 + +1.1 758,454 + -1.6 758,455 - -1.1 758,455 - -1.9 758,458 + -2.7 758,459 - -2.7 758,459 - -1.1 758,459 - -2.0 758,518 + Echvi_0676 0.11 -3.0 758,607 - Echvi_0676 0.24 -2.3 758,719 - Echvi_0676 0.40 -0.9 758,730 + Echvi_0676 0.41 -3.9 758,730 + Echvi_0676 0.41 -1.6 758,800 - Echvi_0676 0.51 -1.7 758,800 - Echvi_0676 0.51 -2.4 758,814 + Echvi_0676 0.53 +0.1 758,819 + Echvi_0676 0.54 -1.9 758,819 + Echvi_0676 0.54 -1.1 758,848 + Echvi_0676 0.58 -1.3 758,939 + Echvi_0676 0.70 -4.2 758,939 + Echvi_0676 0.70 -2.7 758,947 + Echvi_0676 0.72 -1.2 758,947 + Echvi_0676 0.72 -4.8 758,947 + Echvi_0676 0.72 -3.0 758,948 - Echvi_0676 0.72 -4.3 758,975 + Echvi_0676 0.76 -2.8 758,986 + Echvi_0676 0.77 -1.9 758,986 + Echvi_0676 0.77 -1.4 759,090 - -1.8 759,107 + -4.0 759,110 + -5.0 759,151 + +0.6 759,151 + +0.6 759,152 - -0.9 759,166 + -0.6 759,166 + -1.9 759,178 - +0.1 759,178 - -1.6 759,179 + +0.0 759,180 - +0.1 759,208 + +0.5 759,259 - Echvi_0677 0.14 -1.8 759,332 + Echvi_0677 0.24 -0.8 759,333 - Echvi_0677 0.24 -1.8 759,333 - Echvi_0677 0.24 +0.4 759,333 - Echvi_0677 0.24 -0.1 759,434 + Echvi_0677 0.36 -0.6 759,435 - Echvi_0677 0.36 -0.3 759,438 + Echvi_0677 0.37 -0.4 759,438 + Echvi_0677 0.37 -0.4 759,439 - Echvi_0677 0.37 -0.4 759,439 - Echvi_0677 0.37 -0.1 759,490 - Echvi_0677 0.43 -0.4 759,526 + Echvi_0677 0.48 -0.2 759,527 - Echvi_0677 0.48 +1.5 759,527 - Echvi_0677 0.48 -0.7 759,570 + Echvi_0677 0.53 +1.1 759,570 + Echvi_0677 0.53 +0.9 759,571 - Echvi_0677 0.54 -0.4 759,575 + Echvi_0677 0.54 +0.7 759,575 + Echvi_0677 0.54 -0.7 759,608 - Echvi_0677 0.58 -0.6 759,608 - Echvi_0677 0.58 +0.5 759,614 - Echvi_0677 0.59 -0.7 759,629 + Echvi_0677 0.61 -0.1 759,630 - Echvi_0677 0.61 +0.1 759,630 - Echvi_0677 0.61 +0.5 759,658 + Echvi_0677 0.65 +0.2 759,672 + Echvi_0677 0.66 +0.8 759,673 - Echvi_0677 0.66 +2.1 759,673 - Echvi_0677 0.66 -2.4 759,745 - Echvi_0677 0.75 -0.9 759,745 - Echvi_0677 0.75 -1.2 759,798 + Echvi_0677 0.82 -1.1 759,798 + Echvi_0677 0.82 -0.9 759,799 - Echvi_0677 0.82 -0.7 759,799 - Echvi_0677 0.82 -1.3 759,821 - Echvi_0677 0.85 -0.7 759,827 - Echvi_0677 0.86 -0.4 759,837 - Echvi_0677 0.87 -3.0 759,837 - Echvi_0677 0.87 -0.9 759,876 - +1.1 759,876 - -1.4 759,890 + -0.6 759,890 + -1.7 759,891 - +0.1 759,910 + -0.6 759,978 + +2.6 760,005 - -0.2 760,009 + +0.3 760,018 + +0.7 760,019 - -1.1 760,025 - -0.4 760,025 - -1.2 760,028 + -2.5 760,028 + +1.9 760,028 + +0.4 760,029 - +0.4 760,031 + -0.2 760,032 - -1.1 760,071 + -1.9 760,129 + +1.8 760,137 + +1.3 760,138 - -3.4 760,155 + +0.2 760,160 - +0.7 760,230 + -1.7 760,242 + -0.1 760,286 + +0.8 760,287 - -0.6 760,287 - +0.8 760,290 + +0.3 760,290 + -1.2 760,347 - -0.6 760,353 - -0.6 760,359 - +0.2 760,361 - -2.1 760,367 - -1.6 760,519 - -1.2 760,527 + +0.3 760,528 - +0.1 760,528 - -0.3 760,563 - -0.3 760,580 - +0.6 760,588 - -0.7 760,652 + +0.8 760,653 - +0.6 760,696 + -0.4 760,697 - +0.8 760,719 - +0.5 760,782 + +0.8 760,782 + -0.1 760,783 - -0.6 760,784 + +0.5 760,784 + +2.1 760,784 + +0.6 760,784 + -0.0 760,785 - +1.0 760,785 - +1.2 760,785 - -1.0 760,785 - -0.1 760,785 - +0.8 760,788 + -2.4 760,788 + -0.1 760,789 - +0.4 760,789 - +1.4 760,791 + -0.2 760,794 + +1.7 760,794 + +0.3 760,794 + -1.1 760,794 + -0.4 760,794 + +0.1 760,794 + +0.1 760,794 + -0.3 760,794 + +0.7 760,794 + -0.4 760,794 + +0.6 760,795 - +0.2 760,795 - -0.4 760,795 - +0.6 760,795 - +0.3 760,795 - -0.7 760,796 + +1.9 760,796 + -0.7 760,796 + -0.3 760,796 + +0.2 760,797 - +1.3 760,859 + -0.1 760,871 - +0.3 760,874 + +0.2 760,874 + +0.8 760,874 + +0.5 760,875 - -0.2 760,875 - +0.3 760,875 - -0.7 760,875 - +1.1 760,875 - +0.3 760,875 - +0.9 760,875 - +0.9 760,877 - +0.1 760,893 - +0.4 760,893 - -0.1 760,908 - +0.3 760,919 - +0.5
Or see this region's nucleotide sequence