Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0568 and Echvi_0569 are separated by 50 nucleotides Echvi_0569 and Echvi_0570 are separated by 86 nucleotides Echvi_0570 and Echvi_0571 overlap by 38 nucleotides Echvi_0571 and Echvi_0572 are separated by 23 nucleotides
Echvi_0568: Echvi_0568 - hypothetical protein, at 647,633 to 647,890
_0568
Echvi_0569: Echvi_0569 - hypothetical protein, at 647,941 to 648,777
_0569
Echvi_0570: Echvi_0570 - hypothetical protein, at 648,864 to 650,018
_0570
Echvi_0571: Echvi_0571 - hypothetical protein, at 649,981 to 650,226
_0571
Echvi_0572: Echvi_0572 - hypothetical protein, at 650,250 to 651,383
_0572
Position (kb) 648
649
650
651 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 647.865 kb on + strand at 647.902 kb on - strand at 647.902 kb on - strand at 648.016 kb on - strand at 648.116 kb on - strand, within Echvi_0569 at 648.250 kb on - strand, within Echvi_0569 at 648.261 kb on - strand, within Echvi_0569 at 648.299 kb on - strand, within Echvi_0569 at 648.318 kb on + strand, within Echvi_0569 at 648.319 kb on - strand, within Echvi_0569 at 648.319 kb on - strand, within Echvi_0569 at 648.320 kb on + strand, within Echvi_0569 at 648.321 kb on - strand, within Echvi_0569 at 648.321 kb on - strand, within Echvi_0569 at 648.377 kb on + strand, within Echvi_0569 at 648.377 kb on + strand, within Echvi_0569 at 648.383 kb on + strand, within Echvi_0569 at 648.384 kb on - strand, within Echvi_0569 at 648.384 kb on - strand, within Echvi_0569 at 648.479 kb on - strand, within Echvi_0569 at 648.583 kb on - strand, within Echvi_0569 at 648.605 kb on + strand, within Echvi_0569 at 648.605 kb on + strand, within Echvi_0569 at 648.638 kb on + strand, within Echvi_0569 at 648.654 kb on - strand, within Echvi_0569 at 648.654 kb on - strand, within Echvi_0569 at 648.654 kb on - strand, within Echvi_0569 at 648.726 kb on + strand at 648.767 kb on - strand at 648.777 kb on + strand at 648.792 kb on + strand at 648.796 kb on + strand at 648.797 kb on - strand at 648.806 kb on + strand at 648.834 kb on + strand at 648.834 kb on + strand at 648.834 kb on + strand at 648.834 kb on + strand at 648.834 kb on + strand at 648.835 kb on - strand at 648.835 kb on - strand at 648.835 kb on - strand at 648.835 kb on - strand at 648.835 kb on - strand at 648.835 kb on - strand at 648.835 kb on - strand at 648.842 kb on + strand at 648.889 kb on + strand at 648.890 kb on - strand at 648.890 kb on - strand at 648.935 kb on + strand at 648.935 kb on + strand at 648.936 kb on - strand at 648.944 kb on + strand at 648.954 kb on + strand at 648.954 kb on + strand at 648.954 kb on + strand at 648.955 kb on - strand at 648.955 kb on - strand at 648.968 kb on + strand at 648.969 kb on - strand at 648.969 kb on - strand at 649.070 kb on + strand, within Echvi_0570 at 649.095 kb on + strand, within Echvi_0570 at 649.105 kb on - strand, within Echvi_0570 at 649.105 kb on - strand, within Echvi_0570 at 649.141 kb on + strand, within Echvi_0570 at 649.142 kb on - strand, within Echvi_0570 at 649.195 kb on + strand, within Echvi_0570 at 649.196 kb on - strand, within Echvi_0570 at 649.268 kb on + strand, within Echvi_0570 at 649.272 kb on + strand, within Echvi_0570 at 649.288 kb on - strand, within Echvi_0570 at 649.319 kb on - strand, within Echvi_0570 at 649.324 kb on + strand, within Echvi_0570 at 649.324 kb on + strand, within Echvi_0570 at 649.324 kb on + strand, within Echvi_0570 at 649.324 kb on + strand, within Echvi_0570 at 649.324 kb on + strand, within Echvi_0570 at 649.325 kb on - strand, within Echvi_0570 at 649.325 kb on - strand, within Echvi_0570 at 649.325 kb on - strand, within Echvi_0570 at 649.325 kb on - strand, within Echvi_0570 at 649.331 kb on + strand, within Echvi_0570 at 649.332 kb on - strand, within Echvi_0570 at 649.332 kb on - strand, within Echvi_0570 at 649.458 kb on - strand, within Echvi_0570 at 649.521 kb on - strand, within Echvi_0570 at 649.571 kb on - strand, within Echvi_0570 at 649.609 kb on + strand, within Echvi_0570 at 649.613 kb on + strand, within Echvi_0570 at 649.613 kb on + strand, within Echvi_0570 at 649.614 kb on - strand, within Echvi_0570 at 649.614 kb on - strand, within Echvi_0570 at 649.616 kb on + strand, within Echvi_0570 at 649.712 kb on + strand, within Echvi_0570 at 649.712 kb on + strand, within Echvi_0570 at 649.768 kb on - strand, within Echvi_0570 at 649.769 kb on + strand, within Echvi_0570 at 649.769 kb on + strand, within Echvi_0570 at 649.770 kb on - strand, within Echvi_0570 at 649.770 kb on - strand, within Echvi_0570 at 649.916 kb on + strand at 649.916 kb on + strand at 649.916 kb on + strand at 649.917 kb on - strand at 649.948 kb on - strand at 650.004 kb on + strand at 650.005 kb on - strand at 650.028 kb on + strand, within Echvi_0571 at 650.028 kb on + strand, within Echvi_0571 at 650.029 kb on - strand, within Echvi_0571 at 650.029 kb on - strand, within Echvi_0571 at 650.032 kb on - strand, within Echvi_0571 at 650.039 kb on + strand, within Echvi_0571 at 650.039 kb on + strand, within Echvi_0571 at 650.039 kb on + strand, within Echvi_0571 at 650.039 kb on + strand, within Echvi_0571 at 650.040 kb on - strand, within Echvi_0571 at 650.040 kb on - strand, within Echvi_0571 at 650.043 kb on + strand, within Echvi_0571 at 650.043 kb on + strand, within Echvi_0571 at 650.043 kb on + strand, within Echvi_0571 at 650.043 kb on + strand, within Echvi_0571 at 650.044 kb on - strand, within Echvi_0571 at 650.044 kb on - strand, within Echvi_0571 at 650.044 kb on - strand, within Echvi_0571 at 650.044 kb on - strand, within Echvi_0571 at 650.044 kb on - strand, within Echvi_0571 at 650.045 kb on + strand, within Echvi_0571 at 650.046 kb on - strand, within Echvi_0571 at 650.066 kb on - strand, within Echvi_0571 at 650.094 kb on + strand, within Echvi_0571 at 650.095 kb on - strand, within Echvi_0571 at 650.099 kb on - strand, within Echvi_0571 at 650.110 kb on + strand, within Echvi_0571 at 650.173 kb on - strand, within Echvi_0571 at 650.173 kb on - strand, within Echvi_0571 at 650.195 kb on - strand, within Echvi_0571 at 650.195 kb on - strand, within Echvi_0571 at 650.228 kb on + strand at 650.228 kb on + strand at 650.229 kb on - strand at 650.240 kb on + strand at 650.262 kb on + strand at 650.263 kb on - strand at 650.263 kb on - strand at 650.275 kb on + strand at 650.275 kb on + strand at 650.275 kb on + strand at 650.276 kb on - strand at 650.276 kb on - strand at 650.276 kb on - strand at 650.279 kb on - strand at 650.279 kb on - strand at 650.279 kb on - strand at 650.280 kb on + strand at 650.400 kb on + strand, within Echvi_0572 at 650.401 kb on - strand, within Echvi_0572 at 650.401 kb on - strand, within Echvi_0572 at 650.451 kb on - strand, within Echvi_0572 at 650.451 kb on - strand, within Echvi_0572 at 650.454 kb on + strand, within Echvi_0572 at 650.485 kb on + strand, within Echvi_0572 at 650.485 kb on + strand, within Echvi_0572 at 650.490 kb on - strand, within Echvi_0572 at 650.512 kb on + strand, within Echvi_0572 at 650.515 kb on + strand, within Echvi_0572 at 650.515 kb on + strand, within Echvi_0572 at 650.515 kb on + strand, within Echvi_0572 at 650.520 kb on + strand, within Echvi_0572 at 650.520 kb on + strand, within Echvi_0572 at 650.520 kb on + strand, within Echvi_0572 at 650.520 kb on + strand, within Echvi_0572 at 650.520 kb on + strand, within Echvi_0572 at 650.521 kb on - strand, within Echvi_0572 at 650.521 kb on - strand, within Echvi_0572 at 650.521 kb on - strand, within Echvi_0572 at 650.553 kb on + strand, within Echvi_0572 at 650.554 kb on - strand, within Echvi_0572 at 650.554 kb on - strand, within Echvi_0572 at 650.578 kb on + strand, within Echvi_0572 at 650.578 kb on + strand, within Echvi_0572 at 650.579 kb on - strand, within Echvi_0572 at 650.579 kb on - strand, within Echvi_0572 at 650.579 kb on - strand, within Echvi_0572 at 650.586 kb on - strand, within Echvi_0572 at 650.671 kb on - strand, within Echvi_0572 at 650.671 kb on - strand, within Echvi_0572 at 650.727 kb on - strand, within Echvi_0572 at 650.727 kb on - strand, within Echvi_0572 at 650.727 kb on - strand, within Echvi_0572 at 650.728 kb on + strand, within Echvi_0572 at 650.730 kb on + strand, within Echvi_0572 at 650.753 kb on + strand, within Echvi_0572 at 650.755 kb on + strand, within Echvi_0572 at 650.773 kb on + strand, within Echvi_0572 at 650.786 kb on + strand, within Echvi_0572 at 650.791 kb on + strand, within Echvi_0572 at 650.792 kb on - strand, within Echvi_0572 at 650.795 kb on + strand, within Echvi_0572 at 650.795 kb on + strand, within Echvi_0572 at 650.861 kb on - strand, within Echvi_0572 at 650.861 kb on - strand, within Echvi_0572 at 650.861 kb on - strand, within Echvi_0572 at 650.863 kb on + strand, within Echvi_0572 at 650.864 kb on - strand, within Echvi_0572 at 650.882 kb on + strand, within Echvi_0572 at 650.883 kb on - strand, within Echvi_0572 at 650.958 kb on - strand, within Echvi_0572 at 650.994 kb on + strand, within Echvi_0572 at 650.994 kb on + strand, within Echvi_0572 at 650.994 kb on + strand, within Echvi_0572 at 650.994 kb on + strand, within Echvi_0572 at 650.994 kb on + strand, within Echvi_0572 at 650.994 kb on + strand, within Echvi_0572 at 650.995 kb on - strand, within Echvi_0572 at 650.995 kb on - strand, within Echvi_0572 at 650.995 kb on - strand, within Echvi_0572 at 650.995 kb on - strand, within Echvi_0572 at 650.996 kb on + strand, within Echvi_0572
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 647,865 + +0.8 647,902 - -0.0 647,902 - -1.8 648,016 - +0.4 648,116 - Echvi_0569 0.21 +0.9 648,250 - Echvi_0569 0.37 +0.2 648,261 - Echvi_0569 0.38 -1.2 648,299 - Echvi_0569 0.43 -1.1 648,318 + Echvi_0569 0.45 -0.0 648,319 - Echvi_0569 0.45 -0.1 648,319 - Echvi_0569 0.45 +0.6 648,320 + Echvi_0569 0.45 -1.6 648,321 - Echvi_0569 0.45 -1.8 648,321 - Echvi_0569 0.45 -1.6 648,377 + Echvi_0569 0.52 +1.4 648,377 + Echvi_0569 0.52 +1.4 648,383 + Echvi_0569 0.53 +1.3 648,384 - Echvi_0569 0.53 -0.8 648,384 - Echvi_0569 0.53 +0.3 648,479 - Echvi_0569 0.64 +0.8 648,583 - Echvi_0569 0.77 -0.9 648,605 + Echvi_0569 0.79 +0.3 648,605 + Echvi_0569 0.79 -0.3 648,638 + Echvi_0569 0.83 +0.2 648,654 - Echvi_0569 0.85 -0.1 648,654 - Echvi_0569 0.85 +0.5 648,654 - Echvi_0569 0.85 +0.0 648,726 + -1.3 648,767 - +0.2 648,777 + -1.2 648,792 + +0.5 648,796 + -0.3 648,797 - +0.1 648,806 + +0.8 648,834 + +0.1 648,834 + +0.6 648,834 + -0.6 648,834 + +1.0 648,834 + -0.7 648,835 - -1.9 648,835 - +1.5 648,835 - -0.8 648,835 - +0.6 648,835 - -0.8 648,835 - -0.4 648,835 - -1.2 648,842 + +1.0 648,889 + +0.6 648,890 - +0.1 648,890 - +1.1 648,935 + +0.3 648,935 + -0.2 648,936 - -0.1 648,944 + -1.6 648,954 + +2.0 648,954 + -0.6 648,954 + -0.5 648,955 - -0.8 648,955 - +0.4 648,968 + -1.2 648,969 - -0.3 648,969 - +1.2 649,070 + Echvi_0570 0.18 -2.7 649,095 + Echvi_0570 0.20 +0.6 649,105 - Echvi_0570 0.21 +2.4 649,105 - Echvi_0570 0.21 +0.9 649,141 + Echvi_0570 0.24 -1.0 649,142 - Echvi_0570 0.24 +0.9 649,195 + Echvi_0570 0.29 +0.2 649,196 - Echvi_0570 0.29 +0.4 649,268 + Echvi_0570 0.35 +1.2 649,272 + Echvi_0570 0.35 -0.8 649,288 - Echvi_0570 0.37 +2.2 649,319 - Echvi_0570 0.39 +1.0 649,324 + Echvi_0570 0.40 -2.8 649,324 + Echvi_0570 0.40 +0.0 649,324 + Echvi_0570 0.40 +1.2 649,324 + Echvi_0570 0.40 -0.5 649,324 + Echvi_0570 0.40 +1.0 649,325 - Echvi_0570 0.40 -0.5 649,325 - Echvi_0570 0.40 +1.1 649,325 - Echvi_0570 0.40 -0.2 649,325 - Echvi_0570 0.40 -1.8 649,331 + Echvi_0570 0.40 -0.3 649,332 - Echvi_0570 0.41 +1.6 649,332 - Echvi_0570 0.41 -0.4 649,458 - Echvi_0570 0.51 -0.3 649,521 - Echvi_0570 0.57 +1.6 649,571 - Echvi_0570 0.61 +0.7 649,609 + Echvi_0570 0.65 +1.0 649,613 + Echvi_0570 0.65 -3.2 649,613 + Echvi_0570 0.65 +0.4 649,614 - Echvi_0570 0.65 +1.4 649,614 - Echvi_0570 0.65 -0.1 649,616 + Echvi_0570 0.65 +0.4 649,712 + Echvi_0570 0.73 -0.2 649,712 + Echvi_0570 0.73 -1.1 649,768 - Echvi_0570 0.78 +1.1 649,769 + Echvi_0570 0.78 -0.3 649,769 + Echvi_0570 0.78 +1.9 649,770 - Echvi_0570 0.78 +1.7 649,770 - Echvi_0570 0.78 +0.3 649,916 + -1.5 649,916 + +0.1 649,916 + +2.3 649,917 - +0.0 649,948 - +0.1 650,004 + +1.6 650,005 - -1.0 650,028 + Echvi_0571 0.19 -0.1 650,028 + Echvi_0571 0.19 -1.1 650,029 - Echvi_0571 0.20 +0.5 650,029 - Echvi_0571 0.20 +0.7 650,032 - Echvi_0571 0.21 -2.4 650,039 + Echvi_0571 0.24 -0.2 650,039 + Echvi_0571 0.24 -0.2 650,039 + Echvi_0571 0.24 +0.4 650,039 + Echvi_0571 0.24 -1.5 650,040 - Echvi_0571 0.24 +0.2 650,040 - Echvi_0571 0.24 +1.6 650,043 + Echvi_0571 0.25 +0.4 650,043 + Echvi_0571 0.25 -1.5 650,043 + Echvi_0571 0.25 -2.2 650,043 + Echvi_0571 0.25 -2.6 650,044 - Echvi_0571 0.26 +1.4 650,044 - Echvi_0571 0.26 -1.2 650,044 - Echvi_0571 0.26 -0.2 650,044 - Echvi_0571 0.26 +0.5 650,044 - Echvi_0571 0.26 +0.2 650,045 + Echvi_0571 0.26 +0.6 650,046 - Echvi_0571 0.26 +0.2 650,066 - Echvi_0571 0.35 -1.4 650,094 + Echvi_0571 0.46 -0.7 650,095 - Echvi_0571 0.46 -1.2 650,099 - Echvi_0571 0.48 +1.4 650,110 + Echvi_0571 0.52 -0.6 650,173 - Echvi_0571 0.78 -1.0 650,173 - Echvi_0571 0.78 -2.6 650,195 - Echvi_0571 0.87 -2.2 650,195 - Echvi_0571 0.87 +1.6 650,228 + -0.4 650,228 + +0.4 650,229 - -0.2 650,240 + +0.1 650,262 + +1.8 650,263 - +0.9 650,263 - +0.2 650,275 + +1.9 650,275 + +0.4 650,275 + -0.3 650,276 - -2.2 650,276 - -0.3 650,276 - +0.7 650,279 - -1.2 650,279 - -0.6 650,279 - -0.6 650,280 + +0.5 650,400 + Echvi_0572 0.13 +0.6 650,401 - Echvi_0572 0.13 -0.4 650,401 - Echvi_0572 0.13 +0.1 650,451 - Echvi_0572 0.18 +0.2 650,451 - Echvi_0572 0.18 -0.5 650,454 + Echvi_0572 0.18 +0.6 650,485 + Echvi_0572 0.21 -1.5 650,485 + Echvi_0572 0.21 +0.4 650,490 - Echvi_0572 0.21 -0.7 650,512 + Echvi_0572 0.23 -2.2 650,515 + Echvi_0572 0.23 +0.5 650,515 + Echvi_0572 0.23 -0.4 650,515 + Echvi_0572 0.23 +0.6 650,520 + Echvi_0572 0.24 +0.8 650,520 + Echvi_0572 0.24 -1.4 650,520 + Echvi_0572 0.24 +0.2 650,520 + Echvi_0572 0.24 +2.0 650,520 + Echvi_0572 0.24 -0.6 650,521 - Echvi_0572 0.24 -1.8 650,521 - Echvi_0572 0.24 +0.8 650,521 - Echvi_0572 0.24 -1.2 650,553 + Echvi_0572 0.27 -1.6 650,554 - Echvi_0572 0.27 +0.2 650,554 - Echvi_0572 0.27 +0.3 650,578 + Echvi_0572 0.29 +0.8 650,578 + Echvi_0572 0.29 -0.2 650,579 - Echvi_0572 0.29 +0.9 650,579 - Echvi_0572 0.29 -1.6 650,579 - Echvi_0572 0.29 +0.7 650,586 - Echvi_0572 0.30 +1.2 650,671 - Echvi_0572 0.37 -1.6 650,671 - Echvi_0572 0.37 -0.2 650,727 - Echvi_0572 0.42 -0.3 650,727 - Echvi_0572 0.42 +0.8 650,727 - Echvi_0572 0.42 -0.4 650,728 + Echvi_0572 0.42 -0.5 650,730 + Echvi_0572 0.42 +2.2 650,753 + Echvi_0572 0.44 -0.2 650,755 + Echvi_0572 0.45 +1.2 650,773 + Echvi_0572 0.46 +0.5 650,786 + Echvi_0572 0.47 +0.9 650,791 + Echvi_0572 0.48 -0.4 650,792 - Echvi_0572 0.48 +0.0 650,795 + Echvi_0572 0.48 +0.7 650,795 + Echvi_0572 0.48 +0.6 650,861 - Echvi_0572 0.54 -0.0 650,861 - Echvi_0572 0.54 -1.2 650,861 - Echvi_0572 0.54 +0.8 650,863 + Echvi_0572 0.54 -0.1 650,864 - Echvi_0572 0.54 +0.7 650,882 + Echvi_0572 0.56 -2.3 650,883 - Echvi_0572 0.56 +0.0 650,958 - Echvi_0572 0.62 -0.2 650,994 + Echvi_0572 0.66 +0.7 650,994 + Echvi_0572 0.66 -0.8 650,994 + Echvi_0572 0.66 +3.2 650,994 + Echvi_0572 0.66 +0.3 650,994 + Echvi_0572 0.66 -0.4 650,994 + Echvi_0572 0.66 +0.7 650,995 - Echvi_0572 0.66 +0.2 650,995 - Echvi_0572 0.66 +1.4 650,995 - Echvi_0572 0.66 -0.8 650,995 - Echvi_0572 0.66 -0.6 650,996 + Echvi_0572 0.66 +1.8
Or see this region's nucleotide sequence