Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0469 and Echvi_0470 are separated by 451 nucleotides Echvi_0470 and Echvi_0471 overlap by 4 nucleotides Echvi_0471 and Echvi_0472 are separated by 331 nucleotides
Echvi_0469: Echvi_0469 - TonB-linked outer membrane protein, SusC/RagA family, at 514,799 to 517,885
_0469
Echvi_0470: Echvi_0470 - beta-ketoacyl-acyl-carrier-protein synthase II, at 518,337 to 519,581
_0470
Echvi_0471: Echvi_0471 - Bacterial regulatory proteins, tetR family., at 519,578 to 520,138
_0471
Echvi_0472: Echvi_0472 - hypothetical protein, at 520,470 to 520,688
_0472
Position (kb) 518
519
520 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 517.342 kb on + strand, within Echvi_0469 at 517.350 kb on - strand, within Echvi_0469 at 517.370 kb on + strand, within Echvi_0469 at 517.387 kb on + strand, within Echvi_0469 at 517.387 kb on + strand, within Echvi_0469 at 517.387 kb on + strand, within Echvi_0469 at 517.405 kb on + strand, within Echvi_0469 at 517.442 kb on - strand, within Echvi_0469 at 517.520 kb on - strand, within Echvi_0469 at 517.523 kb on + strand, within Echvi_0469 at 517.523 kb on + strand, within Echvi_0469 at 517.524 kb on - strand, within Echvi_0469 at 517.625 kb on + strand at 517.708 kb on + strand at 517.708 kb on + strand at 517.709 kb on - strand at 517.753 kb on + strand at 517.754 kb on - strand at 517.852 kb on - strand at 517.852 kb on - strand at 517.885 kb on + strand at 517.944 kb on + strand at 517.945 kb on - strand at 517.945 kb on - strand at 517.961 kb on - strand at 517.967 kb on + strand at 517.967 kb on + strand at 517.968 kb on - strand at 517.969 kb on + strand at 517.969 kb on + strand at 517.969 kb on + strand at 517.969 kb on + strand at 517.969 kb on + strand at 517.969 kb on + strand at 517.970 kb on - strand at 517.985 kb on + strand at 517.986 kb on - strand at 517.991 kb on + strand at 517.991 kb on + strand at 517.992 kb on - strand at 517.992 kb on - strand at 517.996 kb on + strand at 518.004 kb on + strand at 518.004 kb on + strand at 518.005 kb on - strand at 518.011 kb on + strand at 518.012 kb on - strand at 518.041 kb on + strand at 518.059 kb on + strand at 518.101 kb on - strand at 518.162 kb on + strand at 518.192 kb on + strand at 518.193 kb on - strand at 518.215 kb on + strand at 518.215 kb on + strand at 518.215 kb on + strand at 518.216 kb on - strand at 518.281 kb on - strand at 518.326 kb on - strand at 518.326 kb on - strand at 518.326 kb on - strand at 518.339 kb on - strand at 518.348 kb on - strand at 518.372 kb on + strand at 518.373 kb on - strand at 518.373 kb on - strand at 518.412 kb on + strand at 518.459 kb on + strand at 518.460 kb on - strand at 518.480 kb on + strand, within Echvi_0470 at 518.486 kb on + strand, within Echvi_0470 at 518.487 kb on - strand, within Echvi_0470 at 518.522 kb on + strand, within Echvi_0470 at 518.525 kb on + strand, within Echvi_0470 at 518.525 kb on + strand, within Echvi_0470 at 518.604 kb on - strand, within Echvi_0470 at 518.622 kb on - strand, within Echvi_0470 at 518.669 kb on + strand, within Echvi_0470 at 518.670 kb on - strand, within Echvi_0470 at 518.678 kb on + strand, within Echvi_0470 at 518.678 kb on + strand, within Echvi_0470 at 518.685 kb on - strand, within Echvi_0470 at 518.686 kb on + strand, within Echvi_0470 at 518.686 kb on + strand, within Echvi_0470 at 518.686 kb on + strand, within Echvi_0470 at 518.686 kb on + strand, within Echvi_0470 at 518.686 kb on + strand, within Echvi_0470 at 518.687 kb on - strand, within Echvi_0470 at 518.743 kb on + strand, within Echvi_0470 at 518.743 kb on + strand, within Echvi_0470 at 518.744 kb on - strand, within Echvi_0470 at 518.744 kb on - strand, within Echvi_0470 at 518.744 kb on - strand, within Echvi_0470 at 518.782 kb on + strand, within Echvi_0470 at 518.811 kb on + strand, within Echvi_0470 at 519.024 kb on - strand, within Echvi_0470 at 519.054 kb on - strand, within Echvi_0470 at 519.134 kb on - strand, within Echvi_0470 at 519.206 kb on + strand, within Echvi_0470 at 519.206 kb on + strand, within Echvi_0470 at 519.207 kb on - strand, within Echvi_0470 at 519.223 kb on + strand, within Echvi_0470 at 519.224 kb on - strand, within Echvi_0470 at 519.359 kb on - strand, within Echvi_0470 at 519.359 kb on - strand, within Echvi_0470 at 519.359 kb on - strand, within Echvi_0470 at 519.426 kb on + strand, within Echvi_0470 at 519.504 kb on + strand at 519.525 kb on + strand at 519.525 kb on + strand at 519.525 kb on + strand at 519.525 kb on + strand at 519.570 kb on + strand at 519.581 kb on + strand at 519.582 kb on - strand at 519.589 kb on + strand at 519.596 kb on + strand at 519.608 kb on - strand at 519.725 kb on - strand, within Echvi_0471 at 519.887 kb on - strand, within Echvi_0471 at 519.888 kb on + strand, within Echvi_0471 at 519.888 kb on + strand, within Echvi_0471 at 519.888 kb on + strand, within Echvi_0471 at 519.889 kb on - strand, within Echvi_0471 at 519.889 kb on - strand, within Echvi_0471 at 519.889 kb on - strand, within Echvi_0471 at 519.889 kb on - strand, within Echvi_0471 at 519.903 kb on - strand, within Echvi_0471 at 519.909 kb on - strand, within Echvi_0471 at 519.909 kb on - strand, within Echvi_0471 at 520.017 kb on + strand, within Echvi_0471 at 520.022 kb on + strand, within Echvi_0471 at 520.022 kb on + strand, within Echvi_0471 at 520.022 kb on + strand, within Echvi_0471 at 520.023 kb on - strand, within Echvi_0471 at 520.023 kb on - strand, within Echvi_0471 at 520.078 kb on + strand, within Echvi_0471 at 520.078 kb on + strand, within Echvi_0471 at 520.124 kb on - strand at 520.124 kb on - strand at 520.132 kb on + strand at 520.132 kb on + strand at 520.133 kb on - strand at 520.133 kb on - strand at 520.143 kb on + strand at 520.144 kb on - strand at 520.144 kb on - strand at 520.144 kb on - strand at 520.186 kb on + strand at 520.187 kb on - strand at 520.190 kb on + strand at 520.191 kb on - strand at 520.193 kb on - strand at 520.193 kb on - strand at 520.193 kb on - strand at 520.243 kb on + strand at 520.340 kb on + strand at 520.340 kb on + strand at 520.445 kb on + strand at 520.445 kb on + strand at 520.445 kb on + strand at 520.446 kb on - strand at 520.446 kb on - strand at 520.480 kb on + strand at 520.488 kb on + strand at 520.497 kb on + strand, within Echvi_0472 at 520.499 kb on + strand, within Echvi_0472
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 517,342 + Echvi_0469 0.82 +0.2 517,350 - Echvi_0469 0.83 -0.0 517,370 + Echvi_0469 0.83 +0.1 517,387 + Echvi_0469 0.84 +1.0 517,387 + Echvi_0469 0.84 -0.3 517,387 + Echvi_0469 0.84 -0.6 517,405 + Echvi_0469 0.84 -0.8 517,442 - Echvi_0469 0.86 +0.1 517,520 - Echvi_0469 0.88 +1.1 517,523 + Echvi_0469 0.88 -0.9 517,523 + Echvi_0469 0.88 +1.0 517,524 - Echvi_0469 0.88 -0.4 517,625 + +0.1 517,708 + +3.1 517,708 + +0.7 517,709 - +0.6 517,753 + +1.1 517,754 - +0.4 517,852 - +0.7 517,852 - +1.9 517,885 + +1.4 517,944 + +0.2 517,945 - +0.6 517,945 - -0.5 517,961 - -1.7 517,967 + +0.2 517,967 + +0.6 517,968 - +0.9 517,969 + -0.0 517,969 + +0.5 517,969 + +0.8 517,969 + +0.1 517,969 + +0.1 517,969 + +0.1 517,970 - +1.1 517,985 + +0.9 517,986 - -0.7 517,991 + -1.2 517,991 + +0.0 517,992 - -1.3 517,992 - +1.6 517,996 + +2.1 518,004 + +1.1 518,004 + +0.8 518,005 - +0.7 518,011 + +0.6 518,012 - -0.5 518,041 + -0.9 518,059 + +1.5 518,101 - +3.1 518,162 + +1.1 518,192 + -0.2 518,193 - +1.8 518,215 + -0.0 518,215 + -0.1 518,215 + +1.5 518,216 - -1.9 518,281 - +0.9 518,326 - -0.7 518,326 - -0.9 518,326 - +1.3 518,339 - -1.9 518,348 - +2.6 518,372 + -2.2 518,373 - -1.0 518,373 - +0.3 518,412 + +0.7 518,459 + -1.8 518,460 - -1.4 518,480 + Echvi_0470 0.11 +1.1 518,486 + Echvi_0470 0.12 -2.2 518,487 - Echvi_0470 0.12 -0.0 518,522 + Echvi_0470 0.15 -0.4 518,525 + Echvi_0470 0.15 +0.6 518,525 + Echvi_0470 0.15 +0.7 518,604 - Echvi_0470 0.21 -1.4 518,622 - Echvi_0470 0.23 -0.3 518,669 + Echvi_0470 0.27 -1.0 518,670 - Echvi_0470 0.27 -0.9 518,678 + Echvi_0470 0.27 -1.0 518,678 + Echvi_0470 0.27 -1.3 518,685 - Echvi_0470 0.28 -2.0 518,686 + Echvi_0470 0.28 +0.9 518,686 + Echvi_0470 0.28 -0.6 518,686 + Echvi_0470 0.28 +0.6 518,686 + Echvi_0470 0.28 -1.8 518,686 + Echvi_0470 0.28 -0.8 518,687 - Echvi_0470 0.28 -1.8 518,743 + Echvi_0470 0.33 -0.7 518,743 + Echvi_0470 0.33 +0.1 518,744 - Echvi_0470 0.33 -1.9 518,744 - Echvi_0470 0.33 +0.9 518,744 - Echvi_0470 0.33 +0.3 518,782 + Echvi_0470 0.36 -0.2 518,811 + Echvi_0470 0.38 -0.0 519,024 - Echvi_0470 0.55 -0.9 519,054 - Echvi_0470 0.58 -1.7 519,134 - Echvi_0470 0.64 +0.7 519,206 + Echvi_0470 0.70 -0.1 519,206 + Echvi_0470 0.70 -0.9 519,207 - Echvi_0470 0.70 +0.0 519,223 + Echvi_0470 0.71 -0.3 519,224 - Echvi_0470 0.71 +0.2 519,359 - Echvi_0470 0.82 -0.7 519,359 - Echvi_0470 0.82 -1.4 519,359 - Echvi_0470 0.82 +0.2 519,426 + Echvi_0470 0.87 +0.3 519,504 + -1.9 519,525 + -0.0 519,525 + -0.2 519,525 + +0.4 519,525 + -0.9 519,570 + +0.1 519,581 + +0.7 519,582 - -0.7 519,589 + -1.0 519,596 + +0.1 519,608 - -1.7 519,725 - Echvi_0471 0.26 +1.4 519,887 - Echvi_0471 0.55 +0.9 519,888 + Echvi_0471 0.55 +1.6 519,888 + Echvi_0471 0.55 -1.1 519,888 + Echvi_0471 0.55 +0.9 519,889 - Echvi_0471 0.55 +1.0 519,889 - Echvi_0471 0.55 +0.6 519,889 - Echvi_0471 0.55 +0.4 519,889 - Echvi_0471 0.55 +0.7 519,903 - Echvi_0471 0.58 +1.7 519,909 - Echvi_0471 0.59 +0.1 519,909 - Echvi_0471 0.59 +1.6 520,017 + Echvi_0471 0.78 -0.2 520,022 + Echvi_0471 0.79 -0.3 520,022 + Echvi_0471 0.79 +0.3 520,022 + Echvi_0471 0.79 -1.4 520,023 - Echvi_0471 0.79 +0.8 520,023 - Echvi_0471 0.79 -0.0 520,078 + Echvi_0471 0.89 +1.1 520,078 + Echvi_0471 0.89 +0.5 520,124 - +0.6 520,124 - +1.1 520,132 + +0.3 520,132 + +0.1 520,133 - -1.0 520,133 - -1.6 520,143 + +0.3 520,144 - +0.7 520,144 - +2.1 520,144 - -0.4 520,186 + +0.9 520,187 - -0.6 520,190 + -0.1 520,191 - -0.1 520,193 - -0.3 520,193 - -1.4 520,193 - +1.5 520,243 + +0.1 520,340 + -0.5 520,340 + -0.8 520,445 + -1.3 520,445 + +0.4 520,445 + -0.7 520,446 - +0.6 520,446 - +0.7 520,480 + -1.5 520,488 + +0.2 520,497 + Echvi_0472 0.12 -0.4 520,499 + Echvi_0472 0.13 +0.5
Or see this region's nucleotide sequence