Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0464 and Echvi_0465 are separated by 333 nucleotides Echvi_0465 and Echvi_0466 overlap by 17 nucleotides Echvi_0466 and Echvi_0467 are separated by 112 nucleotides
Echvi_0464: Echvi_0464 - Protein of unknown function (DUF2726)., at 508,718 to 509,575
_0464
Echvi_0465: Echvi_0465 - hypothetical protein, at 509,909 to 511,240
_0465
Echvi_0466: Echvi_0466 - hypothetical protein, at 511,224 to 511,928
_0466
Echvi_0467: Echvi_0467 - hypothetical protein, at 512,041 to 512,457
_0467
Position (kb) 509
510
511
512 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 508.955 kb on + strand, within Echvi_0464 at 508.995 kb on - strand, within Echvi_0464 at 508.995 kb on - strand, within Echvi_0464 at 508.995 kb on - strand, within Echvi_0464 at 508.995 kb on - strand, within Echvi_0464 at 509.026 kb on + strand, within Echvi_0464 at 509.026 kb on + strand, within Echvi_0464 at 509.026 kb on + strand, within Echvi_0464 at 509.026 kb on + strand, within Echvi_0464 at 509.027 kb on - strand, within Echvi_0464 at 509.069 kb on + strand, within Echvi_0464 at 509.078 kb on + strand, within Echvi_0464 at 509.140 kb on - strand, within Echvi_0464 at 509.144 kb on + strand, within Echvi_0464 at 509.145 kb on - strand, within Echvi_0464 at 509.195 kb on - strand, within Echvi_0464 at 509.221 kb on - strand, within Echvi_0464 at 509.225 kb on + strand, within Echvi_0464 at 509.243 kb on + strand, within Echvi_0464 at 509.244 kb on - strand, within Echvi_0464 at 509.259 kb on + strand, within Echvi_0464 at 509.263 kb on - strand, within Echvi_0464 at 509.271 kb on + strand, within Echvi_0464 at 509.271 kb on + strand, within Echvi_0464 at 509.271 kb on + strand, within Echvi_0464 at 509.272 kb on - strand, within Echvi_0464 at 509.272 kb on - strand, within Echvi_0464 at 509.275 kb on + strand, within Echvi_0464 at 509.275 kb on + strand, within Echvi_0464 at 509.275 kb on + strand, within Echvi_0464 at 509.275 kb on + strand, within Echvi_0464 at 509.276 kb on - strand, within Echvi_0464 at 509.366 kb on + strand, within Echvi_0464 at 509.422 kb on + strand, within Echvi_0464 at 509.429 kb on + strand, within Echvi_0464 at 509.434 kb on + strand, within Echvi_0464 at 509.434 kb on + strand, within Echvi_0464 at 509.450 kb on - strand, within Echvi_0464 at 509.489 kb on - strand, within Echvi_0464 at 509.503 kb on - strand at 509.506 kb on - strand at 509.506 kb on - strand at 509.554 kb on - strand at 509.554 kb on - strand at 509.582 kb on - strand at 509.587 kb on + strand at 509.624 kb on + strand at 509.624 kb on + strand at 509.632 kb on + strand at 509.644 kb on + strand at 509.675 kb on + strand at 509.688 kb on + strand at 509.688 kb on + strand at 509.713 kb on + strand at 509.960 kb on - strand at 510.008 kb on + strand at 510.011 kb on - strand at 510.032 kb on + strand at 510.033 kb on - strand at 510.033 kb on - strand at 510.065 kb on + strand, within Echvi_0465 at 510.066 kb on - strand, within Echvi_0465 at 510.109 kb on - strand, within Echvi_0465 at 510.133 kb on + strand, within Echvi_0465 at 510.134 kb on - strand, within Echvi_0465 at 510.185 kb on - strand, within Echvi_0465 at 510.185 kb on - strand, within Echvi_0465 at 510.206 kb on - strand, within Echvi_0465 at 510.257 kb on - strand, within Echvi_0465 at 510.257 kb on - strand, within Echvi_0465 at 510.257 kb on - strand, within Echvi_0465 at 510.257 kb on - strand, within Echvi_0465 at 510.257 kb on - strand, within Echvi_0465 at 510.306 kb on - strand, within Echvi_0465 at 510.383 kb on - strand, within Echvi_0465 at 510.436 kb on - strand, within Echvi_0465 at 510.436 kb on - strand, within Echvi_0465 at 510.464 kb on - strand, within Echvi_0465 at 510.464 kb on - strand, within Echvi_0465 at 510.545 kb on - strand, within Echvi_0465 at 510.550 kb on - strand, within Echvi_0465 at 510.554 kb on - strand, within Echvi_0465 at 510.613 kb on - strand, within Echvi_0465 at 510.640 kb on - strand, within Echvi_0465 at 510.752 kb on - strand, within Echvi_0465 at 510.759 kb on - strand, within Echvi_0465 at 510.879 kb on - strand, within Echvi_0465 at 510.879 kb on - strand, within Echvi_0465 at 510.879 kb on - strand, within Echvi_0465 at 510.879 kb on - strand, within Echvi_0465 at 510.995 kb on - strand, within Echvi_0465 at 510.995 kb on - strand, within Echvi_0465 at 511.007 kb on - strand, within Echvi_0465 at 511.007 kb on - strand, within Echvi_0465 at 511.007 kb on - strand, within Echvi_0465 at 511.084 kb on - strand, within Echvi_0465 at 511.086 kb on - strand, within Echvi_0465 at 511.086 kb on - strand, within Echvi_0465 at 511.112 kb on - strand at 511.112 kb on - strand at 511.112 kb on - strand at 511.146 kb on - strand at 511.146 kb on - strand at 511.161 kb on - strand at 511.161 kb on - strand at 511.176 kb on - strand at 511.176 kb on - strand at 511.199 kb on - strand at 511.295 kb on + strand, within Echvi_0466 at 511.310 kb on + strand, within Echvi_0466 at 511.311 kb on - strand, within Echvi_0466 at 511.311 kb on - strand, within Echvi_0466 at 511.311 kb on - strand, within Echvi_0466 at 511.349 kb on + strand, within Echvi_0466 at 511.350 kb on - strand, within Echvi_0466 at 511.354 kb on + strand, within Echvi_0466 at 511.354 kb on + strand, within Echvi_0466 at 511.354 kb on + strand, within Echvi_0466 at 511.355 kb on - strand, within Echvi_0466 at 511.355 kb on - strand, within Echvi_0466 at 511.358 kb on - strand, within Echvi_0466 at 511.358 kb on - strand, within Echvi_0466 at 511.358 kb on - strand, within Echvi_0466 at 511.361 kb on - strand, within Echvi_0466 at 511.407 kb on - strand, within Echvi_0466 at 511.412 kb on - strand, within Echvi_0466 at 511.447 kb on - strand, within Echvi_0466 at 511.447 kb on - strand, within Echvi_0466 at 511.451 kb on + strand, within Echvi_0466 at 511.451 kb on + strand, within Echvi_0466 at 511.451 kb on + strand, within Echvi_0466 at 511.452 kb on - strand, within Echvi_0466 at 511.465 kb on + strand, within Echvi_0466 at 511.511 kb on - strand, within Echvi_0466 at 511.511 kb on - strand, within Echvi_0466 at 511.553 kb on + strand, within Echvi_0466 at 511.554 kb on - strand, within Echvi_0466 at 511.677 kb on + strand, within Echvi_0466 at 511.677 kb on + strand, within Echvi_0466 at 511.677 kb on + strand, within Echvi_0466 at 511.677 kb on + strand, within Echvi_0466 at 511.678 kb on - strand, within Echvi_0466 at 511.723 kb on - strand, within Echvi_0466 at 511.723 kb on - strand, within Echvi_0466 at 511.723 kb on - strand, within Echvi_0466 at 511.747 kb on + strand, within Echvi_0466 at 511.797 kb on - strand, within Echvi_0466 at 511.803 kb on - strand, within Echvi_0466 at 511.803 kb on - strand, within Echvi_0466 at 511.913 kb on - strand at 511.913 kb on - strand at 511.926 kb on + strand at 511.927 kb on - strand at 511.927 kb on - strand at 511.940 kb on + strand at 511.940 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.984 kb on - strand at 511.984 kb on - strand at 511.984 kb on - strand at 511.984 kb on - strand at 511.984 kb on - strand at 511.984 kb on - strand at 511.987 kb on + strand at 511.991 kb on + strand at 511.991 kb on + strand at 511.991 kb on + strand at 512.011 kb on + strand at 512.038 kb on + strand at 512.070 kb on + strand at 512.079 kb on + strand at 512.089 kb on - strand, within Echvi_0467 at 512.124 kb on + strand, within Echvi_0467 at 512.179 kb on - strand, within Echvi_0467 at 512.179 kb on - strand, within Echvi_0467 at 512.182 kb on - strand, within Echvi_0467 at 512.182 kb on - strand, within Echvi_0467
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 508,955 + Echvi_0464 0.28 +0.2 508,995 - Echvi_0464 0.32 -1.5 508,995 - Echvi_0464 0.32 -1.2 508,995 - Echvi_0464 0.32 -2.0 508,995 - Echvi_0464 0.32 -0.3 509,026 + Echvi_0464 0.36 +1.1 509,026 + Echvi_0464 0.36 +0.1 509,026 + Echvi_0464 0.36 +0.3 509,026 + Echvi_0464 0.36 +0.3 509,027 - Echvi_0464 0.36 -0.1 509,069 + Echvi_0464 0.41 -0.5 509,078 + Echvi_0464 0.42 -0.1 509,140 - Echvi_0464 0.49 -0.9 509,144 + Echvi_0464 0.50 -1.9 509,145 - Echvi_0464 0.50 -2.7 509,195 - Echvi_0464 0.56 +0.4 509,221 - Echvi_0464 0.59 -0.5 509,225 + Echvi_0464 0.59 -0.2 509,243 + Echvi_0464 0.61 -0.1 509,244 - Echvi_0464 0.61 +0.4 509,259 + Echvi_0464 0.63 -0.1 509,263 - Echvi_0464 0.64 -0.4 509,271 + Echvi_0464 0.64 +0.4 509,271 + Echvi_0464 0.64 +0.2 509,271 + Echvi_0464 0.64 -1.0 509,272 - Echvi_0464 0.65 +1.1 509,272 - Echvi_0464 0.65 -2.0 509,275 + Echvi_0464 0.65 -0.4 509,275 + Echvi_0464 0.65 -0.2 509,275 + Echvi_0464 0.65 +0.9 509,275 + Echvi_0464 0.65 +1.0 509,276 - Echvi_0464 0.65 -0.9 509,366 + Echvi_0464 0.76 +2.0 509,422 + Echvi_0464 0.82 +0.5 509,429 + Echvi_0464 0.83 +3.4 509,434 + Echvi_0464 0.83 +0.2 509,434 + Echvi_0464 0.83 -1.2 509,450 - Echvi_0464 0.85 -2.9 509,489 - Echvi_0464 0.90 -1.1 509,503 - +0.8 509,506 - -1.9 509,506 - +0.6 509,554 - -0.4 509,554 - +0.5 509,582 - +0.5 509,587 + +1.1 509,624 + -0.0 509,624 + -3.1 509,632 + -0.7 509,644 + -0.3 509,675 + -0.6 509,688 + -1.2 509,688 + +0.1 509,713 + +0.6 509,960 - +2.1 510,008 + -0.9 510,011 - -0.1 510,032 + -2.5 510,033 - +0.1 510,033 - +1.2 510,065 + Echvi_0465 0.12 +0.6 510,066 - Echvi_0465 0.12 -0.9 510,109 - Echvi_0465 0.15 +0.3 510,133 + Echvi_0465 0.17 -0.9 510,134 - Echvi_0465 0.17 +0.3 510,185 - Echvi_0465 0.21 -0.1 510,185 - Echvi_0465 0.21 -1.7 510,206 - Echvi_0465 0.22 +1.7 510,257 - Echvi_0465 0.26 -0.0 510,257 - Echvi_0465 0.26 -1.8 510,257 - Echvi_0465 0.26 +1.7 510,257 - Echvi_0465 0.26 +2.0 510,257 - Echvi_0465 0.26 -0.8 510,306 - Echvi_0465 0.30 +0.9 510,383 - Echvi_0465 0.36 +0.5 510,436 - Echvi_0465 0.40 +0.7 510,436 - Echvi_0465 0.40 -0.1 510,464 - Echvi_0465 0.42 +0.9 510,464 - Echvi_0465 0.42 -0.7 510,545 - Echvi_0465 0.48 -0.7 510,550 - Echvi_0465 0.48 -0.9 510,554 - Echvi_0465 0.48 +0.5 510,613 - Echvi_0465 0.53 -0.3 510,640 - Echvi_0465 0.55 -0.6 510,752 - Echvi_0465 0.63 +0.9 510,759 - Echvi_0465 0.64 -2.1 510,879 - Echvi_0465 0.73 -1.8 510,879 - Echvi_0465 0.73 +1.0 510,879 - Echvi_0465 0.73 -2.2 510,879 - Echvi_0465 0.73 +1.9 510,995 - Echvi_0465 0.82 -1.3 510,995 - Echvi_0465 0.82 -0.1 511,007 - Echvi_0465 0.82 +0.4 511,007 - Echvi_0465 0.82 +1.7 511,007 - Echvi_0465 0.82 -1.3 511,084 - Echvi_0465 0.88 +0.6 511,086 - Echvi_0465 0.88 +1.6 511,086 - Echvi_0465 0.88 -0.1 511,112 - +0.9 511,112 - -1.2 511,112 - +0.8 511,146 - +0.3 511,146 - -0.7 511,161 - -1.2 511,161 - +2.3 511,176 - +1.0 511,176 - -0.8 511,199 - -0.3 511,295 + Echvi_0466 0.10 -1.6 511,310 + Echvi_0466 0.12 +1.5 511,311 - Echvi_0466 0.12 -0.4 511,311 - Echvi_0466 0.12 +0.4 511,311 - Echvi_0466 0.12 -0.3 511,349 + Echvi_0466 0.18 -0.3 511,350 - Echvi_0466 0.18 +1.6 511,354 + Echvi_0466 0.18 -2.2 511,354 + Echvi_0466 0.18 -0.4 511,354 + Echvi_0466 0.18 -0.7 511,355 - Echvi_0466 0.19 +1.1 511,355 - Echvi_0466 0.19 +1.7 511,358 - Echvi_0466 0.19 +0.8 511,358 - Echvi_0466 0.19 +2.1 511,358 - Echvi_0466 0.19 -2.1 511,361 - Echvi_0466 0.19 +0.7 511,407 - Echvi_0466 0.26 -0.2 511,412 - Echvi_0466 0.27 +1.0 511,447 - Echvi_0466 0.32 -0.2 511,447 - Echvi_0466 0.32 +1.6 511,451 + Echvi_0466 0.32 +0.2 511,451 + Echvi_0466 0.32 +1.3 511,451 + Echvi_0466 0.32 -1.5 511,452 - Echvi_0466 0.32 +0.0 511,465 + Echvi_0466 0.34 +0.6 511,511 - Echvi_0466 0.41 +0.7 511,511 - Echvi_0466 0.41 -0.9 511,553 + Echvi_0466 0.47 -1.3 511,554 - Echvi_0466 0.47 +0.8 511,677 + Echvi_0466 0.64 +1.2 511,677 + Echvi_0466 0.64 +2.0 511,677 + Echvi_0466 0.64 -1.4 511,677 + Echvi_0466 0.64 -0.2 511,678 - Echvi_0466 0.64 +0.3 511,723 - Echvi_0466 0.71 +0.2 511,723 - Echvi_0466 0.71 -0.3 511,723 - Echvi_0466 0.71 +1.4 511,747 + Echvi_0466 0.74 +0.9 511,797 - Echvi_0466 0.81 -0.0 511,803 - Echvi_0466 0.82 +1.6 511,803 - Echvi_0466 0.82 +0.9 511,913 - -0.9 511,913 - +1.4 511,926 + -0.6 511,927 - -0.2 511,927 - +0.2 511,940 + +0.2 511,940 + -0.4 511,983 + -2.6 511,983 + -0.8 511,983 + +0.1 511,983 + -0.2 511,983 + -0.9 511,983 + +1.1 511,983 + +0.6 511,984 - +0.1 511,984 - +1.1 511,984 - -1.0 511,984 - -0.3 511,984 - +1.1 511,984 - +1.8 511,987 + -0.6 511,991 + -1.8 511,991 + +1.1 511,991 + +0.8 512,011 + +2.0 512,038 + +0.7 512,070 + -0.7 512,079 + -0.0 512,089 - Echvi_0467 0.12 +0.7 512,124 + Echvi_0467 0.20 -0.7 512,179 - Echvi_0467 0.33 +0.8 512,179 - Echvi_0467 0.33 +0.2 512,182 - Echvi_0467 0.34 -0.9 512,182 - Echvi_0467 0.34 -0.8
Or see this region's nucleotide sequence