Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0411 and Echvi_0412 are separated by 430 nucleotides Echvi_0412 and Echvi_0413 are separated by 180 nucleotides
Echvi_0411: Echvi_0411 - FOG: Transposase and inactivated derivatives, at 450,580 to 451,812
_0411
Echvi_0412: Echvi_0412 - Transposase and inactivated derivatives, at 452,243 to 452,704
_0412
Echvi_0413: Echvi_0413 - Fic/DOC family., at 452,885 to 453,868
_0413
Position (kb) 452
453 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 451.867 kb on + strand at 451.910 kb on + strand at 451.911 kb on - strand at 451.912 kb on + strand at 451.913 kb on - strand at 451.914 kb on + strand at 451.925 kb on - strand at 451.932 kb on + strand at 451.996 kb on + strand at 451.996 kb on + strand at 451.997 kb on - strand at 451.997 kb on - strand at 452.001 kb on - strand at 452.001 kb on - strand at 452.001 kb on - strand at 452.020 kb on + strand at 452.020 kb on + strand at 452.021 kb on - strand at 452.072 kb on + strand at 452.072 kb on + strand at 452.072 kb on + strand at 452.073 kb on - strand at 452.095 kb on + strand at 452.098 kb on + strand at 452.098 kb on + strand at 452.098 kb on + strand at 452.098 kb on + strand at 452.098 kb on + strand at 452.098 kb on + strand at 452.099 kb on - strand at 452.099 kb on - strand at 452.099 kb on - strand at 452.100 kb on + strand at 452.100 kb on + strand at 452.101 kb on - strand at 452.129 kb on - strand at 452.129 kb on - strand at 452.129 kb on - strand at 452.132 kb on + strand at 452.132 kb on + strand at 452.133 kb on - strand at 452.134 kb on + strand at 452.186 kb on - strand at 452.186 kb on - strand at 452.206 kb on - strand at 452.265 kb on + strand at 452.265 kb on + strand at 452.265 kb on + strand at 452.266 kb on - strand at 452.317 kb on + strand, within Echvi_0412 at 452.317 kb on + strand, within Echvi_0412 at 452.318 kb on - strand, within Echvi_0412 at 452.325 kb on + strand, within Echvi_0412 at 452.358 kb on - strand, within Echvi_0412 at 452.465 kb on + strand, within Echvi_0412 at 452.475 kb on - strand, within Echvi_0412 at 452.475 kb on - strand, within Echvi_0412 at 452.476 kb on + strand, within Echvi_0412 at 452.476 kb on + strand, within Echvi_0412 at 452.477 kb on - strand, within Echvi_0412 at 452.477 kb on - strand, within Echvi_0412 at 452.477 kb on - strand, within Echvi_0412 at 452.479 kb on + strand, within Echvi_0412 at 452.479 kb on + strand, within Echvi_0412 at 452.480 kb on - strand, within Echvi_0412 at 452.480 kb on - strand, within Echvi_0412 at 452.481 kb on + strand, within Echvi_0412 at 452.482 kb on - strand, within Echvi_0412 at 452.510 kb on + strand, within Echvi_0412 at 452.511 kb on - strand, within Echvi_0412 at 452.553 kb on + strand, within Echvi_0412 at 452.558 kb on + strand, within Echvi_0412 at 452.615 kb on + strand, within Echvi_0412 at 452.615 kb on + strand, within Echvi_0412 at 452.615 kb on + strand, within Echvi_0412 at 452.615 kb on + strand, within Echvi_0412 at 452.616 kb on - strand, within Echvi_0412 at 452.616 kb on - strand, within Echvi_0412 at 452.616 kb on - strand, within Echvi_0412 at 452.616 kb on - strand, within Echvi_0412 at 452.616 kb on - strand, within Echvi_0412 at 452.616 kb on - strand, within Echvi_0412 at 452.617 kb on + strand, within Echvi_0412 at 452.617 kb on + strand, within Echvi_0412 at 452.617 kb on + strand, within Echvi_0412 at 452.617 kb on + strand, within Echvi_0412 at 452.617 kb on + strand, within Echvi_0412 at 452.617 kb on + strand, within Echvi_0412 at 452.617 kb on + strand, within Echvi_0412 at 452.617 kb on + strand, within Echvi_0412 at 452.617 kb on + strand, within Echvi_0412 at 452.617 kb on + strand, within Echvi_0412 at 452.617 kb on + strand, within Echvi_0412 at 452.618 kb on - strand, within Echvi_0412 at 452.618 kb on - strand, within Echvi_0412 at 452.618 kb on - strand, within Echvi_0412 at 452.618 kb on - strand, within Echvi_0412 at 452.618 kb on - strand, within Echvi_0412 at 452.618 kb on - strand, within Echvi_0412 at 452.618 kb on - strand, within Echvi_0412 at 452.618 kb on - strand, within Echvi_0412 at 452.618 kb on - strand, within Echvi_0412 at 452.623 kb on + strand, within Echvi_0412 at 452.668 kb on + strand at 452.669 kb on - strand at 452.669 kb on - strand at 452.684 kb on - strand at 452.684 kb on - strand at 452.686 kb on - strand at 452.690 kb on - strand at 452.690 kb on - strand at 452.690 kb on - strand at 452.690 kb on - strand at 452.690 kb on - strand at 452.693 kb on - strand at 452.693 kb on - strand at 452.774 kb on - strand at 452.793 kb on - strand at 452.793 kb on - strand at 452.796 kb on + strand at 452.797 kb on - strand at 452.797 kb on - strand at 452.799 kb on + strand at 452.801 kb on + strand at 452.802 kb on - strand at 452.802 kb on - strand at 452.830 kb on + strand at 452.859 kb on - strand at 452.864 kb on + strand at 452.872 kb on + strand at 452.872 kb on + strand at 452.872 kb on + strand at 452.873 kb on - strand at 452.875 kb on + strand at 452.913 kb on - strand at 452.940 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 451,867 + +2.2 451,910 + -0.0 451,911 - +0.2 451,912 + +0.6 451,913 - -0.3 451,914 + -2.1 451,925 - +1.7 451,932 + -0.2 451,996 + +1.3 451,996 + +0.7 451,997 - -0.4 451,997 - +0.0 452,001 - +1.7 452,001 - +0.7 452,001 - +0.4 452,020 + +1.4 452,020 + -1.9 452,021 - +0.2 452,072 + +0.4 452,072 + +0.3 452,072 + +2.2 452,073 - -0.5 452,095 + -0.1 452,098 + -0.3 452,098 + +1.2 452,098 + -1.3 452,098 + +0.3 452,098 + +0.0 452,098 + -0.3 452,099 - +0.1 452,099 - -1.8 452,099 - -0.2 452,100 + -0.2 452,100 + -0.8 452,101 - +0.9 452,129 - +0.5 452,129 - +2.5 452,129 - +0.6 452,132 + -0.5 452,132 + -2.4 452,133 - -2.5 452,134 + +0.2 452,186 - +0.9 452,186 - -1.7 452,206 - +0.3 452,265 + -0.7 452,265 + +0.8 452,265 + +0.0 452,266 - -1.4 452,317 + Echvi_0412 0.16 +0.9 452,317 + Echvi_0412 0.16 -0.1 452,318 - Echvi_0412 0.16 +1.4 452,325 + Echvi_0412 0.18 +2.0 452,358 - Echvi_0412 0.25 +0.7 452,465 + Echvi_0412 0.48 -0.2 452,475 - Echvi_0412 0.50 +1.2 452,475 - Echvi_0412 0.50 +1.5 452,476 + Echvi_0412 0.50 +0.3 452,476 + Echvi_0412 0.50 +1.1 452,477 - Echvi_0412 0.51 -0.2 452,477 - Echvi_0412 0.51 -0.8 452,477 - Echvi_0412 0.51 +0.1 452,479 + Echvi_0412 0.51 -0.1 452,479 + Echvi_0412 0.51 -0.0 452,480 - Echvi_0412 0.51 -0.7 452,480 - Echvi_0412 0.51 -2.5 452,481 + Echvi_0412 0.52 +0.4 452,482 - Echvi_0412 0.52 +1.4 452,510 + Echvi_0412 0.58 +0.3 452,511 - Echvi_0412 0.58 -2.2 452,553 + Echvi_0412 0.67 +0.8 452,558 + Echvi_0412 0.68 +0.9 452,615 + Echvi_0412 0.81 +1.2 452,615 + Echvi_0412 0.81 +1.4 452,615 + Echvi_0412 0.81 +0.7 452,615 + Echvi_0412 0.81 +0.0 452,616 - Echvi_0412 0.81 -2.3 452,616 - Echvi_0412 0.81 +0.2 452,616 - Echvi_0412 0.81 -0.4 452,616 - Echvi_0412 0.81 -0.5 452,616 - Echvi_0412 0.81 -0.7 452,616 - Echvi_0412 0.81 +2.0 452,617 + Echvi_0412 0.81 +0.4 452,617 + Echvi_0412 0.81 -0.5 452,617 + Echvi_0412 0.81 +1.9 452,617 + Echvi_0412 0.81 -1.1 452,617 + Echvi_0412 0.81 -0.1 452,617 + Echvi_0412 0.81 +0.8 452,617 + Echvi_0412 0.81 +1.5 452,617 + Echvi_0412 0.81 -0.6 452,617 + Echvi_0412 0.81 +0.6 452,617 + Echvi_0412 0.81 -1.2 452,617 + Echvi_0412 0.81 -0.1 452,618 - Echvi_0412 0.81 -2.7 452,618 - Echvi_0412 0.81 +0.2 452,618 - Echvi_0412 0.81 -0.2 452,618 - Echvi_0412 0.81 +0.0 452,618 - Echvi_0412 0.81 -1.0 452,618 - Echvi_0412 0.81 +0.1 452,618 - Echvi_0412 0.81 +1.8 452,618 - Echvi_0412 0.81 -1.7 452,618 - Echvi_0412 0.81 -3.3 452,623 + Echvi_0412 0.82 -0.3 452,668 + -0.1 452,669 - +0.8 452,669 - -0.7 452,684 - +0.3 452,684 - -1.2 452,686 - +0.1 452,690 - -0.4 452,690 - -0.9 452,690 - -0.7 452,690 - +0.6 452,690 - -1.9 452,693 - +0.8 452,693 - +0.1 452,774 - +0.3 452,793 - -0.0 452,793 - -0.2 452,796 + -0.0 452,797 - -0.4 452,797 - -0.4 452,799 + +0.5 452,801 + +0.7 452,802 - +0.7 452,802 - -2.8 452,830 + +0.3 452,859 - -1.3 452,864 + -0.2 452,872 + -0.7 452,872 + -1.4 452,872 + +0.5 452,873 - +1.0 452,875 + -0.1 452,913 - -0.1 452,940 - +0.9
Or see this region's nucleotide sequence