Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0132 and Echvi_0133 are separated by 156 nucleotides Echvi_0133 and Echvi_0134 overlap by 106 nucleotides Echvi_0134 and Echvi_0135 overlap by 29 nucleotides
Echvi_0132: Echvi_0132 - glutamyl-tRNA reductase, at 130,884 to 132,155
_0132
Echvi_0133: Echvi_0133 - KWG Leptospira., at 132,312 to 133,874
_0133
Echvi_0134: Echvi_0134 - hypothetical protein, at 133,769 to 134,284
_0134
Echvi_0135: Echvi_0135 - Uncharacterized protein conserved in bacteria, at 134,256 to 135,263
_0135
Position (kb) 132
133
134 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 132.167 kb on - strand at 132.167 kb on - strand at 132.167 kb on - strand at 132.167 kb on - strand at 132.167 kb on - strand at 132.225 kb on + strand at 132.242 kb on + strand at 132.280 kb on - strand at 132.323 kb on - strand at 132.354 kb on + strand at 132.354 kb on + strand at 132.355 kb on - strand at 132.355 kb on - strand at 132.355 kb on - strand at 132.358 kb on + strand at 132.359 kb on - strand at 132.359 kb on - strand at 132.359 kb on - strand at 132.359 kb on - strand at 132.362 kb on - strand at 132.368 kb on + strand at 132.377 kb on + strand at 132.391 kb on - strand at 132.399 kb on + strand at 132.399 kb on + strand at 132.399 kb on + strand at 132.399 kb on + strand at 132.548 kb on - strand, within Echvi_0133 at 132.549 kb on + strand, within Echvi_0133 at 132.549 kb on + strand, within Echvi_0133 at 132.550 kb on - strand, within Echvi_0133 at 132.550 kb on - strand, within Echvi_0133 at 132.550 kb on - strand, within Echvi_0133 at 132.550 kb on - strand, within Echvi_0133 at 132.550 kb on - strand, within Echvi_0133 at 132.560 kb on - strand, within Echvi_0133 at 132.560 kb on - strand, within Echvi_0133 at 132.640 kb on - strand, within Echvi_0133 at 132.661 kb on - strand, within Echvi_0133 at 132.696 kb on + strand, within Echvi_0133 at 132.696 kb on + strand, within Echvi_0133 at 132.697 kb on - strand, within Echvi_0133 at 132.830 kb on + strand, within Echvi_0133 at 132.830 kb on + strand, within Echvi_0133 at 132.830 kb on + strand, within Echvi_0133 at 132.830 kb on + strand, within Echvi_0133 at 132.830 kb on + strand, within Echvi_0133 at 132.831 kb on - strand, within Echvi_0133 at 132.831 kb on - strand, within Echvi_0133 at 132.834 kb on + strand, within Echvi_0133 at 132.834 kb on + strand, within Echvi_0133 at 132.834 kb on + strand, within Echvi_0133 at 132.835 kb on - strand, within Echvi_0133 at 132.835 kb on - strand, within Echvi_0133 at 132.835 kb on - strand, within Echvi_0133 at 132.835 kb on - strand, within Echvi_0133 at 132.891 kb on + strand, within Echvi_0133 at 132.899 kb on + strand, within Echvi_0133 at 132.918 kb on + strand, within Echvi_0133 at 132.918 kb on + strand, within Echvi_0133 at 132.918 kb on + strand, within Echvi_0133 at 132.919 kb on - strand, within Echvi_0133 at 132.993 kb on + strand, within Echvi_0133 at 132.994 kb on - strand, within Echvi_0133 at 132.994 kb on - strand, within Echvi_0133 at 133.036 kb on - strand, within Echvi_0133 at 133.036 kb on - strand, within Echvi_0133 at 133.036 kb on - strand, within Echvi_0133 at 133.040 kb on + strand, within Echvi_0133 at 133.040 kb on + strand, within Echvi_0133 at 133.040 kb on + strand, within Echvi_0133 at 133.040 kb on + strand, within Echvi_0133 at 133.041 kb on - strand, within Echvi_0133 at 133.041 kb on - strand, within Echvi_0133 at 133.044 kb on + strand, within Echvi_0133 at 133.083 kb on + strand, within Echvi_0133 at 133.083 kb on + strand, within Echvi_0133 at 133.083 kb on + strand, within Echvi_0133 at 133.129 kb on + strand, within Echvi_0133 at 133.179 kb on + strand, within Echvi_0133 at 133.560 kb on + strand, within Echvi_0133 at 133.564 kb on - strand, within Echvi_0133 at 133.571 kb on + strand, within Echvi_0133 at 133.571 kb on + strand, within Echvi_0133 at 133.571 kb on + strand, within Echvi_0133 at 133.572 kb on - strand, within Echvi_0133 at 133.572 kb on - strand, within Echvi_0133 at 133.596 kb on + strand, within Echvi_0133 at 133.596 kb on + strand, within Echvi_0133 at 133.596 kb on + strand, within Echvi_0133 at 133.597 kb on - strand, within Echvi_0133 at 133.597 kb on - strand, within Echvi_0133 at 133.638 kb on - strand, within Echvi_0133 at 133.690 kb on - strand, within Echvi_0133 at 133.690 kb on - strand at 133.765 kb on - strand at 133.765 kb on - strand at 133.765 kb on - strand at 133.768 kb on - strand at 133.873 kb on - strand at 133.912 kb on + strand, within Echvi_0134 at 133.933 kb on + strand, within Echvi_0134 at 133.933 kb on + strand, within Echvi_0134 at 133.934 kb on - strand, within Echvi_0134 at 133.963 kb on + strand, within Echvi_0134 at 134.003 kb on - strand, within Echvi_0134 at 134.003 kb on - strand, within Echvi_0134 at 134.013 kb on + strand, within Echvi_0134 at 134.034 kb on - strand, within Echvi_0134 at 134.034 kb on - strand, within Echvi_0134 at 134.034 kb on - strand, within Echvi_0134 at 134.220 kb on - strand, within Echvi_0134 at 134.237 kb on + strand at 134.279 kb on + strand at 134.279 kb on + strand at 134.279 kb on + strand at 134.279 kb on + strand at 134.279 kb on + strand at 134.280 kb on - strand at 134.280 kb on - strand at 134.356 kb on + strand at 134.359 kb on + strand, within Echvi_0135 at 134.434 kb on - strand, within Echvi_0135 at 134.514 kb on - strand, within Echvi_0135 at 134.528 kb on + strand, within Echvi_0135 at 134.556 kb on + strand, within Echvi_0135 at 134.635 kb on - strand, within Echvi_0135 at 134.635 kb on - strand, within Echvi_0135 at 134.690 kb on + strand, within Echvi_0135 at 134.859 kb on - strand, within Echvi_0135
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 132,167 - -1.1 132,167 - +2.3 132,167 - -2.3 132,167 - +0.2 132,167 - +0.2 132,225 + -0.2 132,242 + +0.6 132,280 - +1.0 132,323 - +0.5 132,354 + +0.2 132,354 + +1.0 132,355 - +0.6 132,355 - +2.4 132,355 - +0.1 132,358 + +0.8 132,359 - -1.5 132,359 - +1.4 132,359 - +2.3 132,359 - +0.6 132,362 - -0.4 132,368 + +1.3 132,377 + +2.1 132,391 - +1.6 132,399 + +1.1 132,399 + +0.2 132,399 + +0.1 132,399 + +0.9 132,548 - Echvi_0133 0.15 +1.6 132,549 + Echvi_0133 0.15 +1.5 132,549 + Echvi_0133 0.15 +1.3 132,550 - Echvi_0133 0.15 -0.0 132,550 - Echvi_0133 0.15 +0.6 132,550 - Echvi_0133 0.15 +2.0 132,550 - Echvi_0133 0.15 -2.5 132,550 - Echvi_0133 0.15 +0.7 132,560 - Echvi_0133 0.16 +2.0 132,560 - Echvi_0133 0.16 +0.9 132,640 - Echvi_0133 0.21 +1.2 132,661 - Echvi_0133 0.22 +1.5 132,696 + Echvi_0133 0.25 +2.9 132,696 + Echvi_0133 0.25 +2.1 132,697 - Echvi_0133 0.25 +1.0 132,830 + Echvi_0133 0.33 +5.2 132,830 + Echvi_0133 0.33 +1.0 132,830 + Echvi_0133 0.33 -1.1 132,830 + Echvi_0133 0.33 -0.8 132,830 + Echvi_0133 0.33 +0.1 132,831 - Echvi_0133 0.33 +0.4 132,831 - Echvi_0133 0.33 +0.8 132,834 + Echvi_0133 0.33 -0.2 132,834 + Echvi_0133 0.33 +1.4 132,834 + Echvi_0133 0.33 +1.2 132,835 - Echvi_0133 0.33 +0.7 132,835 - Echvi_0133 0.33 +0.7 132,835 - Echvi_0133 0.33 +1.3 132,835 - Echvi_0133 0.33 +0.2 132,891 + Echvi_0133 0.37 +0.4 132,899 + Echvi_0133 0.38 -1.6 132,918 + Echvi_0133 0.39 +1.0 132,918 + Echvi_0133 0.39 +0.2 132,918 + Echvi_0133 0.39 +2.4 132,919 - Echvi_0133 0.39 -1.3 132,993 + Echvi_0133 0.44 -0.7 132,994 - Echvi_0133 0.44 +0.5 132,994 - Echvi_0133 0.44 +0.9 133,036 - Echvi_0133 0.46 +1.4 133,036 - Echvi_0133 0.46 -0.3 133,036 - Echvi_0133 0.46 +0.2 133,040 + Echvi_0133 0.47 +1.1 133,040 + Echvi_0133 0.47 +0.1 133,040 + Echvi_0133 0.47 +3.3 133,040 + Echvi_0133 0.47 -1.7 133,041 - Echvi_0133 0.47 +1.9 133,041 - Echvi_0133 0.47 +1.3 133,044 + Echvi_0133 0.47 +0.7 133,083 + Echvi_0133 0.49 +0.7 133,083 + Echvi_0133 0.49 +1.5 133,083 + Echvi_0133 0.49 +0.8 133,129 + Echvi_0133 0.52 -0.1 133,179 + Echvi_0133 0.55 +0.4 133,560 + Echvi_0133 0.80 +0.9 133,564 - Echvi_0133 0.80 +0.9 133,571 + Echvi_0133 0.81 +0.6 133,571 + Echvi_0133 0.81 +0.1 133,571 + Echvi_0133 0.81 +2.2 133,572 - Echvi_0133 0.81 +1.2 133,572 - Echvi_0133 0.81 +0.9 133,596 + Echvi_0133 0.82 -0.1 133,596 + Echvi_0133 0.82 +1.0 133,596 + Echvi_0133 0.82 +1.6 133,597 - Echvi_0133 0.82 -0.4 133,597 - Echvi_0133 0.82 -0.7 133,638 - Echvi_0133 0.85 +1.8 133,690 - Echvi_0133 0.88 +1.0 133,690 - +2.2 133,765 - -1.0 133,765 - -1.1 133,765 - -0.3 133,768 - -1.4 133,873 - +0.8 133,912 + Echvi_0134 0.28 +0.1 133,933 + Echvi_0134 0.32 +0.7 133,933 + Echvi_0134 0.32 +1.1 133,934 - Echvi_0134 0.32 +0.8 133,963 + Echvi_0134 0.38 -0.8 134,003 - Echvi_0134 0.45 +0.2 134,003 - Echvi_0134 0.45 -0.8 134,013 + Echvi_0134 0.47 -1.2 134,034 - Echvi_0134 0.51 +1.9 134,034 - Echvi_0134 0.51 -0.3 134,034 - Echvi_0134 0.51 +3.9 134,220 - Echvi_0134 0.87 +0.2 134,237 + +0.3 134,279 + +1.2 134,279 + -0.2 134,279 + -0.4 134,279 + +0.3 134,279 + +0.3 134,280 - -1.0 134,280 - +1.2 134,356 + -1.5 134,359 + Echvi_0135 0.10 -1.8 134,434 - Echvi_0135 0.18 +0.3 134,514 - Echvi_0135 0.26 +0.6 134,528 + Echvi_0135 0.27 +0.3 134,556 + Echvi_0135 0.30 +1.5 134,635 - Echvi_0135 0.38 +2.2 134,635 - Echvi_0135 0.38 +1.1 134,690 + Echvi_0135 0.43 -0.2 134,859 - Echvi_0135 0.60 +0.1
Or see this region's nucleotide sequence