Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19930 and CA264_19935 are separated by 155 nucleotides CA264_19935 and CA264_19940 are separated by 172 nucleotides
CA264_19930: CA264_19930 - NAD(P)-dependent oxidoreductase, at 4,595,752 to 4,596,663
_19930
CA264_19935: CA264_19935 - sodium:calcium symporter, at 4,596,819 to 4,598,471
_19935
CA264_19940: CA264_19940 - DNA uptake-like protein, at 4,598,644 to 4,599,588
_19940
Position (kb)
4596
4597
4598
4599 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4596.661 kb on + strand at 4596.661 kb on + strand at 4596.662 kb on - strand at 4596.682 kb on + strand at 4596.736 kb on + strand at 4596.737 kb on - strand at 4596.737 kb on - strand at 4596.740 kb on + strand at 4596.740 kb on + strand at 4596.776 kb on + strand at 4596.776 kb on + strand at 4596.776 kb on + strand at 4596.776 kb on + strand at 4596.777 kb on - strand at 4596.777 kb on - strand at 4596.777 kb on - strand at 4596.779 kb on + strand at 4596.779 kb on + strand at 4596.779 kb on + strand at 4596.779 kb on + strand at 4596.784 kb on + strand at 4596.784 kb on + strand at 4596.785 kb on - strand at 4596.790 kb on - strand at 4596.794 kb on - strand at 4596.886 kb on + strand at 4596.887 kb on - strand at 4596.925 kb on + strand at 4597.093 kb on - strand, within CA264_19935 at 4597.138 kb on - strand, within CA264_19935 at 4597.170 kb on + strand, within CA264_19935 at 4597.170 kb on + strand, within CA264_19935 at 4597.242 kb on + strand, within CA264_19935 at 4597.587 kb on + strand, within CA264_19935 at 4597.596 kb on + strand, within CA264_19935 at 4597.597 kb on - strand, within CA264_19935 at 4597.826 kb on + strand, within CA264_19935 at 4597.913 kb on + strand, within CA264_19935 at 4597.977 kb on - strand, within CA264_19935 at 4597.995 kb on + strand, within CA264_19935 at 4597.996 kb on - strand, within CA264_19935 at 4598.013 kb on + strand, within CA264_19935 at 4598.031 kb on - strand, within CA264_19935 at 4598.292 kb on - strand, within CA264_19935 at 4598.299 kb on + strand, within CA264_19935 at 4598.300 kb on - strand, within CA264_19935 at 4598.387 kb on + strand at 4598.388 kb on - strand at 4598.392 kb on + strand at 4598.393 kb on - strand at 4598.393 kb on - strand at 4598.404 kb on + strand at 4598.430 kb on + strand at 4598.469 kb on + strand at 4598.494 kb on - strand at 4598.533 kb on - strand at 4598.591 kb on + strand at 4598.626 kb on - strand at 4598.727 kb on - strand at 4598.770 kb on + strand, within CA264_19940 at 4598.793 kb on + strand, within CA264_19940 at 4598.872 kb on + strand, within CA264_19940 at 4598.993 kb on + strand, within CA264_19940 at 4599.007 kb on + strand, within CA264_19940 at 4599.008 kb on - strand, within CA264_19940 at 4599.070 kb on + strand, within CA264_19940 at 4599.071 kb on - strand, within CA264_19940 at 4599.074 kb on + strand, within CA264_19940 at 4599.075 kb on - strand, within CA264_19940 at 4599.103 kb on + strand, within CA264_19940 at 4599.103 kb on + strand, within CA264_19940 at 4599.106 kb on - strand, within CA264_19940 at 4599.106 kb on - strand, within CA264_19940 at 4599.106 kb on - strand, within CA264_19940 at 4599.119 kb on - strand, within CA264_19940 at 4599.278 kb on - strand, within CA264_19940 at 4599.303 kb on + strand, within CA264_19940 at 4599.303 kb on + strand, within CA264_19940 at 4599.328 kb on + strand, within CA264_19940 at 4599.328 kb on + strand, within CA264_19940 at 4599.368 kb on - strand, within CA264_19940 at 4599.369 kb on + strand, within CA264_19940 at 4599.370 kb on - strand, within CA264_19940 at 4599.404 kb on + strand, within CA264_19940 at 4599.405 kb on - strand, within CA264_19940 at 4599.448 kb on + strand, within CA264_19940
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 4,596,661 + +0.1 4,596,661 + +0.8 4,596,662 - +0.6 4,596,682 + -0.0 4,596,736 + +2.9 4,596,737 - +0.7 4,596,737 - +0.4 4,596,740 + +0.6 4,596,740 + +0.7 4,596,776 + +0.4 4,596,776 + +0.3 4,596,776 + -0.4 4,596,776 + +0.8 4,596,777 - +0.7 4,596,777 - +0.8 4,596,777 - -0.1 4,596,779 + +0.4 4,596,779 + +0.3 4,596,779 + +0.7 4,596,779 + +0.9 4,596,784 + +1.1 4,596,784 + +2.0 4,596,785 - -0.1 4,596,790 - +0.3 4,596,794 - -0.2 4,596,886 + -0.3 4,596,887 - -1.6 4,596,925 + +0.0 4,597,093 - CA264_19935 0.17 -0.2 4,597,138 - CA264_19935 0.19 +0.1 4,597,170 + CA264_19935 0.21 -0.7 4,597,170 + CA264_19935 0.21 -1.0 4,597,242 + CA264_19935 0.26 -0.7 4,597,587 + CA264_19935 0.46 -1.1 4,597,596 + CA264_19935 0.47 -0.9 4,597,597 - CA264_19935 0.47 -0.4 4,597,826 + CA264_19935 0.61 +0.1 4,597,913 + CA264_19935 0.66 -0.5 4,597,977 - CA264_19935 0.70 -0.4 4,597,995 + CA264_19935 0.71 -0.6 4,597,996 - CA264_19935 0.71 +0.3 4,598,013 + CA264_19935 0.72 -0.8 4,598,031 - CA264_19935 0.73 -0.9 4,598,292 - CA264_19935 0.89 -1.0 4,598,299 + CA264_19935 0.90 -0.2 4,598,300 - CA264_19935 0.90 +0.1 4,598,387 + -0.6 4,598,388 - -0.3 4,598,392 + +2.2 4,598,393 - -0.6 4,598,393 - +0.5 4,598,404 + -0.3 4,598,430 + -0.5 4,598,469 + +0.2 4,598,494 - -0.6 4,598,533 - +0.6 4,598,591 + +0.2 4,598,626 - -0.2 4,598,727 - -0.6 4,598,770 + CA264_19940 0.13 +0.2 4,598,793 + CA264_19940 0.16 +0.0 4,598,872 + CA264_19940 0.24 -0.2 4,598,993 + CA264_19940 0.37 -0.7 4,599,007 + CA264_19940 0.38 -1.2 4,599,008 - CA264_19940 0.39 -1.2 4,599,070 + CA264_19940 0.45 -1.2 4,599,071 - CA264_19940 0.45 +0.9 4,599,074 + CA264_19940 0.46 -0.9 4,599,075 - CA264_19940 0.46 -0.3 4,599,103 + CA264_19940 0.49 -0.8 4,599,103 + CA264_19940 0.49 +0.1 4,599,106 - CA264_19940 0.49 -0.4 4,599,106 - CA264_19940 0.49 -0.7 4,599,106 - CA264_19940 0.49 +0.3 4,599,119 - CA264_19940 0.50 -0.3 4,599,278 - CA264_19940 0.67 +0.5 4,599,303 + CA264_19940 0.70 -0.0 4,599,303 + CA264_19940 0.70 -0.0 4,599,328 + CA264_19940 0.72 -0.3 4,599,328 + CA264_19940 0.72 -1.3 4,599,368 - CA264_19940 0.77 +0.4 4,599,369 + CA264_19940 0.77 -2.3 4,599,370 - CA264_19940 0.77 -1.0 4,599,404 + CA264_19940 0.80 +1.6 4,599,405 - CA264_19940 0.81 -1.0 4,599,448 + CA264_19940 0.85 -0.5
Or see this region's nucleotide sequence