Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17070 and CA264_17075 are separated by 119 nucleotides CA264_17075 and CA264_17080 are separated by 127 nucleotides CA264_17080 and CA264_17085 are separated by 1 nucleotides
CA264_17070: CA264_17070 - NAD(P)-dependent oxidoreductase, at 3,974,951 to 3,975,817
_17070
CA264_17075: CA264_17075 - pterin-4-alpha-carbinolamine dehydratase, at 3,975,937 to 3,976,191
_17075
CA264_17080: CA264_17080 - rRNA (cytidine-2'-O-)-methyltransferase, at 3,976,319 to 3,977,029
_17080
CA264_17085: CA264_17085 - hypothetical protein, at 3,977,031 to 3,978,263
_17085
Position (kb)
3976
3977
3978 Strain fitness (log2 ratio)
-1
0
1 at 3975.339 kb on + strand, within CA264_17070 at 3975.340 kb on - strand, within CA264_17070 at 3975.364 kb on + strand, within CA264_17070 at 3975.364 kb on + strand, within CA264_17070 at 3975.392 kb on + strand, within CA264_17070 at 3975.467 kb on + strand, within CA264_17070 at 3975.479 kb on + strand, within CA264_17070 at 3975.685 kb on + strand, within CA264_17070 at 3975.686 kb on - strand, within CA264_17070 at 3975.711 kb on + strand, within CA264_17070 at 3975.712 kb on - strand, within CA264_17070 at 3975.712 kb on - strand, within CA264_17070 at 3975.748 kb on + strand at 3975.748 kb on + strand at 3975.751 kb on - strand at 3975.831 kb on + strand at 3975.852 kb on + strand at 3975.852 kb on + strand at 3975.852 kb on + strand at 3975.853 kb on - strand at 3975.856 kb on + strand at 3975.856 kb on + strand at 3975.856 kb on + strand at 3975.856 kb on + strand at 3975.856 kb on + strand at 3975.857 kb on - strand at 3975.857 kb on - strand at 3975.857 kb on - strand at 3975.858 kb on + strand at 3975.918 kb on + strand at 3975.957 kb on + strand at 3975.958 kb on - strand at 3975.976 kb on - strand, within CA264_17075 at 3975.976 kb on - strand, within CA264_17075 at 3975.990 kb on + strand, within CA264_17075 at 3975.991 kb on - strand, within CA264_17075 at 3976.028 kb on + strand, within CA264_17075 at 3976.029 kb on - strand, within CA264_17075 at 3976.029 kb on - strand, within CA264_17075 at 3976.069 kb on + strand, within CA264_17075 at 3976.085 kb on + strand, within CA264_17075 at 3976.206 kb on + strand at 3976.235 kb on + strand at 3976.236 kb on - strand at 3976.314 kb on - strand at 3976.347 kb on - strand at 3976.390 kb on - strand, within CA264_17080 at 3976.409 kb on - strand, within CA264_17080 at 3976.423 kb on + strand, within CA264_17080 at 3976.424 kb on - strand, within CA264_17080 at 3976.425 kb on + strand, within CA264_17080 at 3976.980 kb on + strand at 3976.980 kb on + strand at 3977.040 kb on + strand at 3977.054 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 3,975,339 + CA264_17070 0.45 -0.1 3,975,340 - CA264_17070 0.45 -0.4 3,975,364 + CA264_17070 0.48 +1.2 3,975,364 + CA264_17070 0.48 -0.3 3,975,392 + CA264_17070 0.51 +0.5 3,975,467 + CA264_17070 0.60 -0.7 3,975,479 + CA264_17070 0.61 -0.8 3,975,685 + CA264_17070 0.85 -0.6 3,975,686 - CA264_17070 0.85 +0.3 3,975,711 + CA264_17070 0.88 -1.0 3,975,712 - CA264_17070 0.88 -0.6 3,975,712 - CA264_17070 0.88 +0.1 3,975,748 + +0.3 3,975,748 + +0.6 3,975,751 - +0.4 3,975,831 + -0.2 3,975,852 + -0.3 3,975,852 + +0.5 3,975,852 + -0.6 3,975,853 - +0.1 3,975,856 + +0.1 3,975,856 + -0.7 3,975,856 + +0.9 3,975,856 + +0.1 3,975,856 + -0.4 3,975,857 - -0.5 3,975,857 - +1.7 3,975,857 - -0.6 3,975,858 + -0.3 3,975,918 + +1.1 3,975,957 + -0.1 3,975,958 - -0.7 3,975,976 - CA264_17075 0.15 -0.9 3,975,976 - CA264_17075 0.15 -0.4 3,975,990 + CA264_17075 0.21 -0.5 3,975,991 - CA264_17075 0.21 -1.6 3,976,028 + CA264_17075 0.36 -0.4 3,976,029 - CA264_17075 0.36 -0.7 3,976,029 - CA264_17075 0.36 +0.1 3,976,069 + CA264_17075 0.52 -0.2 3,976,085 + CA264_17075 0.58 -0.1 3,976,206 + +1.1 3,976,235 + -0.8 3,976,236 - -0.1 3,976,314 - -0.1 3,976,347 - -0.4 3,976,390 - CA264_17080 0.10 -0.4 3,976,409 - CA264_17080 0.13 +1.3 3,976,423 + CA264_17080 0.15 +0.7 3,976,424 - CA264_17080 0.15 -0.7 3,976,425 + CA264_17080 0.15 -0.4 3,976,980 + -0.9 3,976,980 + -1.2 3,977,040 + +0.1 3,977,054 - -0.1
Or see this region's nucleotide sequence