Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16850 and CA264_16855 are separated by 69 nucleotides CA264_16855 and CA264_16860 are separated by 190 nucleotides CA264_16860 and CA264_16865 are separated by 67 nucleotides CA264_16865 and CA264_16870 are separated by 250 nucleotides CA264_16870 and CA264_16875 overlap by 4 nucleotides
CA264_16850: CA264_16850 - hypothetical protein, at 3,932,685 to 3,933,071
_16850
CA264_16855: CA264_16855 - hypothetical protein, at 3,933,141 to 3,933,380
_16855
CA264_16860: CA264_16860 - hypothetical protein, at 3,933,571 to 3,933,750
_16860
CA264_16865: CA264_16865 - hypothetical protein, at 3,933,818 to 3,934,045
_16865
CA264_16870: CA264_16870 - N-acetyltransferase, at 3,934,296 to 3,934,631
_16870
CA264_16875: CA264_16875 - hypothetical protein, at 3,934,628 to 3,934,933
_16875
Position (kb)
3933
3934 Strain fitness (log2 ratio)
-1
0
1 at 3932.576 kb on - strand at 3932.604 kb on + strand at 3932.605 kb on - strand at 3932.652 kb on - strand at 3932.653 kb on + strand at 3932.653 kb on + strand at 3932.654 kb on - strand at 3932.654 kb on - strand at 3932.654 kb on - strand at 3932.696 kb on - strand at 3932.696 kb on - strand at 3932.703 kb on - strand at 3932.744 kb on - strand, within CA264_16850 at 3932.775 kb on + strand, within CA264_16850 at 3932.779 kb on + strand, within CA264_16850 at 3932.779 kb on + strand, within CA264_16850 at 3932.783 kb on + strand, within CA264_16850 at 3932.784 kb on - strand, within CA264_16850 at 3932.810 kb on + strand, within CA264_16850 at 3932.811 kb on - strand, within CA264_16850 at 3932.812 kb on + strand, within CA264_16850 at 3932.812 kb on + strand, within CA264_16850 at 3932.812 kb on + strand, within CA264_16850 at 3932.812 kb on + strand, within CA264_16850 at 3932.813 kb on - strand, within CA264_16850 at 3932.819 kb on - strand, within CA264_16850 at 3932.819 kb on - strand, within CA264_16850 at 3932.875 kb on + strand, within CA264_16850 at 3932.928 kb on - strand, within CA264_16850 at 3932.945 kb on + strand, within CA264_16850 at 3932.946 kb on - strand, within CA264_16850 at 3933.004 kb on + strand, within CA264_16850 at 3933.022 kb on - strand, within CA264_16850 at 3933.070 kb on - strand at 3933.078 kb on - strand at 3933.130 kb on - strand at 3933.144 kb on + strand at 3933.261 kb on + strand, within CA264_16855 at 3933.261 kb on + strand, within CA264_16855 at 3933.293 kb on - strand, within CA264_16855 at 3933.398 kb on + strand at 3933.398 kb on + strand at 3933.398 kb on + strand at 3933.420 kb on + strand at 3933.421 kb on - strand at 3933.422 kb on + strand at 3933.422 kb on + strand at 3933.425 kb on + strand at 3933.425 kb on + strand at 3933.426 kb on - strand at 3933.426 kb on - strand at 3933.427 kb on + strand at 3933.427 kb on + strand at 3933.427 kb on + strand at 3933.428 kb on - strand at 3933.428 kb on - strand at 3933.538 kb on - strand at 3933.538 kb on - strand at 3933.613 kb on + strand, within CA264_16860 at 3933.614 kb on - strand, within CA264_16860 at 3933.614 kb on - strand, within CA264_16860 at 3933.615 kb on + strand, within CA264_16860 at 3933.656 kb on + strand, within CA264_16860 at 3933.656 kb on + strand, within CA264_16860 at 3933.657 kb on - strand, within CA264_16860 at 3933.657 kb on - strand, within CA264_16860 at 3933.712 kb on + strand, within CA264_16860 at 3933.713 kb on - strand, within CA264_16860 at 3933.728 kb on + strand, within CA264_16860 at 3933.731 kb on + strand, within CA264_16860 at 3933.770 kb on + strand at 3933.771 kb on - strand at 3933.771 kb on - strand at 3933.860 kb on + strand, within CA264_16865 at 3933.862 kb on + strand, within CA264_16865 at 3933.863 kb on - strand, within CA264_16865 at 3934.166 kb on - strand at 3934.187 kb on + strand at 3934.188 kb on - strand at 3934.188 kb on - strand at 3934.258 kb on - strand at 3934.282 kb on - strand at 3934.286 kb on - strand at 3934.287 kb on + strand at 3934.287 kb on + strand at 3934.335 kb on + strand, within CA264_16870 at 3934.335 kb on + strand, within CA264_16870 at 3934.336 kb on - strand, within CA264_16870 at 3934.381 kb on + strand, within CA264_16870 at 3934.382 kb on - strand, within CA264_16870 at 3934.543 kb on - strand, within CA264_16870 at 3934.593 kb on - strand, within CA264_16870 at 3934.613 kb on + strand at 3934.731 kb on + strand, within CA264_16875 at 3934.731 kb on + strand, within CA264_16875 at 3934.731 kb on + strand, within CA264_16875 at 3934.732 kb on - strand, within CA264_16875
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 3,932,576 - -0.0 3,932,604 + -1.4 3,932,605 - +0.2 3,932,652 - +1.7 3,932,653 + +0.6 3,932,653 + -0.0 3,932,654 - +0.1 3,932,654 - +0.3 3,932,654 - +0.3 3,932,696 - +0.5 3,932,696 - -1.3 3,932,703 - -0.4 3,932,744 - CA264_16850 0.15 -0.1 3,932,775 + CA264_16850 0.23 +0.0 3,932,779 + CA264_16850 0.24 -0.2 3,932,779 + CA264_16850 0.24 -1.0 3,932,783 + CA264_16850 0.25 +0.4 3,932,784 - CA264_16850 0.26 -0.3 3,932,810 + CA264_16850 0.32 -0.2 3,932,811 - CA264_16850 0.33 -0.2 3,932,812 + CA264_16850 0.33 +0.1 3,932,812 + CA264_16850 0.33 +0.9 3,932,812 + CA264_16850 0.33 -0.1 3,932,812 + CA264_16850 0.33 -0.2 3,932,813 - CA264_16850 0.33 +0.4 3,932,819 - CA264_16850 0.35 -0.4 3,932,819 - CA264_16850 0.35 -0.3 3,932,875 + CA264_16850 0.49 -0.5 3,932,928 - CA264_16850 0.63 +0.3 3,932,945 + CA264_16850 0.67 +0.3 3,932,946 - CA264_16850 0.67 +1.5 3,933,004 + CA264_16850 0.82 +0.4 3,933,022 - CA264_16850 0.87 +0.1 3,933,070 - -0.1 3,933,078 - +1.1 3,933,130 - -0.9 3,933,144 + +0.4 3,933,261 + CA264_16855 0.50 -0.3 3,933,261 + CA264_16855 0.50 +0.5 3,933,293 - CA264_16855 0.63 +0.2 3,933,398 + -0.1 3,933,398 + +0.6 3,933,398 + -0.3 3,933,420 + -0.4 3,933,421 - +0.5 3,933,422 + +1.3 3,933,422 + +0.1 3,933,425 + -1.7 3,933,425 + -0.1 3,933,426 - +1.3 3,933,426 - +0.4 3,933,427 + -0.0 3,933,427 + -0.2 3,933,427 + -0.4 3,933,428 - -0.1 3,933,428 - +1.7 3,933,538 - -0.6 3,933,538 - +1.1 3,933,613 + CA264_16860 0.23 +0.3 3,933,614 - CA264_16860 0.24 -0.3 3,933,614 - CA264_16860 0.24 -0.8 3,933,615 + CA264_16860 0.24 +0.1 3,933,656 + CA264_16860 0.47 +1.0 3,933,656 + CA264_16860 0.47 -0.3 3,933,657 - CA264_16860 0.48 -0.5 3,933,657 - CA264_16860 0.48 +0.0 3,933,712 + CA264_16860 0.78 +0.1 3,933,713 - CA264_16860 0.79 -0.2 3,933,728 + CA264_16860 0.87 +0.2 3,933,731 + CA264_16860 0.89 -0.8 3,933,770 + -0.2 3,933,771 - +0.4 3,933,771 - +0.5 3,933,860 + CA264_16865 0.18 -0.4 3,933,862 + CA264_16865 0.19 +0.2 3,933,863 - CA264_16865 0.20 -0.3 3,934,166 - -0.1 3,934,187 + +0.2 3,934,188 - -1.2 3,934,188 - +0.2 3,934,258 - -0.2 3,934,282 - -0.2 3,934,286 - -0.4 3,934,287 + +0.3 3,934,287 + +0.2 3,934,335 + CA264_16870 0.12 +0.1 3,934,335 + CA264_16870 0.12 +0.9 3,934,336 - CA264_16870 0.12 +0.2 3,934,381 + CA264_16870 0.25 +0.1 3,934,382 - CA264_16870 0.26 +0.1 3,934,543 - CA264_16870 0.74 -0.5 3,934,593 - CA264_16870 0.88 -0.2 3,934,613 + +0.7 3,934,731 + CA264_16875 0.34 -0.4 3,934,731 + CA264_16875 0.34 -0.2 3,934,731 + CA264_16875 0.34 +1.0 3,934,732 - CA264_16875 0.34 -0.1
Or see this region's nucleotide sequence