Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13605 and CA264_13610 are separated by 78 nucleotides CA264_13610 and CA264_13615 are separated by 73 nucleotides
CA264_13605: CA264_13605 - hypothetical protein, at 3,180,589 to 3,181,413
_13605
CA264_13610: CA264_13610 - sodium:proton antiporter, at 3,181,492 to 3,182,739
_13610
CA264_13615: CA264_13615 - hypothetical protein, at 3,182,813 to 3,184,903
_13615
Position (kb)
3181
3182
3183 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3180.690 kb on + strand, within CA264_13605 at 3180.690 kb on + strand, within CA264_13605 at 3180.865 kb on + strand, within CA264_13605 at 3180.865 kb on + strand, within CA264_13605 at 3180.865 kb on + strand, within CA264_13605 at 3180.866 kb on - strand, within CA264_13605 at 3180.866 kb on - strand, within CA264_13605 at 3180.873 kb on + strand, within CA264_13605 at 3181.059 kb on - strand, within CA264_13605 at 3181.078 kb on + strand, within CA264_13605 at 3181.078 kb on + strand, within CA264_13605 at 3181.109 kb on - strand, within CA264_13605 at 3181.149 kb on - strand, within CA264_13605 at 3181.153 kb on + strand, within CA264_13605 at 3181.238 kb on - strand, within CA264_13605 at 3181.239 kb on + strand, within CA264_13605 at 3181.288 kb on - strand, within CA264_13605 at 3181.293 kb on + strand, within CA264_13605 at 3181.412 kb on - strand at 3181.463 kb on + strand at 3181.539 kb on + strand at 3181.539 kb on + strand at 3181.571 kb on - strand at 3181.571 kb on - strand at 3181.604 kb on + strand at 3181.604 kb on + strand at 3181.638 kb on + strand, within CA264_13610 at 3181.674 kb on + strand, within CA264_13610 at 3181.674 kb on + strand, within CA264_13610 at 3181.674 kb on + strand, within CA264_13610 at 3181.675 kb on - strand, within CA264_13610 at 3181.719 kb on - strand, within CA264_13610 at 3181.739 kb on - strand, within CA264_13610 at 3181.742 kb on + strand, within CA264_13610 at 3181.743 kb on - strand, within CA264_13610 at 3181.753 kb on + strand, within CA264_13610 at 3181.754 kb on - strand, within CA264_13610 at 3181.771 kb on - strand, within CA264_13610 at 3181.771 kb on - strand, within CA264_13610 at 3181.771 kb on - strand, within CA264_13610 at 3181.790 kb on + strand, within CA264_13610 at 3181.790 kb on + strand, within CA264_13610 at 3181.791 kb on - strand, within CA264_13610 at 3181.801 kb on - strand, within CA264_13610 at 3181.890 kb on - strand, within CA264_13610 at 3181.939 kb on - strand, within CA264_13610 at 3182.053 kb on + strand, within CA264_13610 at 3182.053 kb on + strand, within CA264_13610 at 3182.196 kb on + strand, within CA264_13610 at 3182.196 kb on + strand, within CA264_13610 at 3182.310 kb on + strand, within CA264_13610 at 3182.320 kb on - strand, within CA264_13610 at 3182.342 kb on + strand, within CA264_13610 at 3182.342 kb on + strand, within CA264_13610 at 3182.342 kb on + strand, within CA264_13610 at 3182.342 kb on + strand, within CA264_13610 at 3182.360 kb on + strand, within CA264_13610 at 3182.382 kb on - strand, within CA264_13610 at 3182.384 kb on + strand, within CA264_13610 at 3182.410 kb on - strand, within CA264_13610 at 3182.442 kb on + strand, within CA264_13610 at 3182.442 kb on + strand, within CA264_13610 at 3182.442 kb on + strand, within CA264_13610 at 3182.442 kb on + strand, within CA264_13610 at 3182.442 kb on + strand, within CA264_13610 at 3182.442 kb on + strand, within CA264_13610 at 3182.442 kb on + strand, within CA264_13610 at 3182.443 kb on - strand, within CA264_13610 at 3182.659 kb on + strand at 3182.668 kb on - strand at 3182.684 kb on + strand at 3182.685 kb on - strand at 3182.710 kb on + strand at 3182.710 kb on + strand at 3182.711 kb on - strand at 3182.722 kb on + strand at 3182.762 kb on - strand at 3182.774 kb on - strand at 3182.777 kb on + strand at 3182.790 kb on - strand at 3182.793 kb on + strand at 3182.800 kb on - strand at 3182.812 kb on + strand at 3182.813 kb on - strand at 3182.829 kb on + strand at 3182.830 kb on - strand at 3182.988 kb on - strand at 3183.006 kb on + strand at 3183.014 kb on - strand at 3183.014 kb on - strand at 3183.081 kb on - strand, within CA264_13615 at 3183.113 kb on + strand, within CA264_13615 at 3183.114 kb on - strand, within CA264_13615 at 3183.121 kb on - strand, within CA264_13615 at 3183.228 kb on + strand, within CA264_13615 at 3183.253 kb on + strand, within CA264_13615 at 3183.253 kb on + strand, within CA264_13615 at 3183.253 kb on + strand, within CA264_13615 at 3183.255 kb on + strand, within CA264_13615 at 3183.389 kb on + strand, within CA264_13615 at 3183.404 kb on - strand, within CA264_13615 at 3183.474 kb on - strand, within CA264_13615 at 3183.494 kb on + strand, within CA264_13615 at 3183.495 kb on - strand, within CA264_13615 at 3183.511 kb on + strand, within CA264_13615 at 3183.533 kb on + strand, within CA264_13615 at 3183.534 kb on - strand, within CA264_13615 at 3183.576 kb on - strand, within CA264_13615 at 3183.623 kb on - strand, within CA264_13615 at 3183.690 kb on - strand, within CA264_13615 at 3183.690 kb on - strand, within CA264_13615
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 3,180,690 + CA264_13605 0.12 -0.4 3,180,690 + CA264_13605 0.12 +0.5 3,180,865 + CA264_13605 0.33 -0.1 3,180,865 + CA264_13605 0.33 +0.5 3,180,865 + CA264_13605 0.33 -0.7 3,180,866 - CA264_13605 0.34 +0.6 3,180,866 - CA264_13605 0.34 -0.1 3,180,873 + CA264_13605 0.34 +0.8 3,181,059 - CA264_13605 0.57 +0.2 3,181,078 + CA264_13605 0.59 +1.1 3,181,078 + CA264_13605 0.59 +0.8 3,181,109 - CA264_13605 0.63 +0.0 3,181,149 - CA264_13605 0.68 -0.3 3,181,153 + CA264_13605 0.68 -0.0 3,181,238 - CA264_13605 0.79 -0.4 3,181,239 + CA264_13605 0.79 +0.8 3,181,288 - CA264_13605 0.85 +0.1 3,181,293 + CA264_13605 0.85 +0.6 3,181,412 - +1.6 3,181,463 + +0.5 3,181,539 + -0.7 3,181,539 + +1.3 3,181,571 - +0.4 3,181,571 - -0.8 3,181,604 + -0.1 3,181,604 + -0.3 3,181,638 + CA264_13610 0.12 -0.0 3,181,674 + CA264_13610 0.15 +0.0 3,181,674 + CA264_13610 0.15 +0.5 3,181,674 + CA264_13610 0.15 -3.1 3,181,675 - CA264_13610 0.15 +0.6 3,181,719 - CA264_13610 0.18 -1.1 3,181,739 - CA264_13610 0.20 -0.2 3,181,742 + CA264_13610 0.20 -0.7 3,181,743 - CA264_13610 0.20 -0.4 3,181,753 + CA264_13610 0.21 +0.5 3,181,754 - CA264_13610 0.21 -1.5 3,181,771 - CA264_13610 0.22 -0.0 3,181,771 - CA264_13610 0.22 -0.8 3,181,771 - CA264_13610 0.22 +0.0 3,181,790 + CA264_13610 0.24 +0.3 3,181,790 + CA264_13610 0.24 -0.2 3,181,791 - CA264_13610 0.24 -0.1 3,181,801 - CA264_13610 0.25 -0.7 3,181,890 - CA264_13610 0.32 -0.5 3,181,939 - CA264_13610 0.36 -0.4 3,182,053 + CA264_13610 0.45 -0.1 3,182,053 + CA264_13610 0.45 +0.8 3,182,196 + CA264_13610 0.56 +0.2 3,182,196 + CA264_13610 0.56 -0.4 3,182,310 + CA264_13610 0.66 +0.5 3,182,320 - CA264_13610 0.66 -0.3 3,182,342 + CA264_13610 0.68 -0.0 3,182,342 + CA264_13610 0.68 +1.5 3,182,342 + CA264_13610 0.68 -0.5 3,182,342 + CA264_13610 0.68 -0.3 3,182,360 + CA264_13610 0.70 -0.7 3,182,382 - CA264_13610 0.71 +1.3 3,182,384 + CA264_13610 0.71 +0.5 3,182,410 - CA264_13610 0.74 +0.1 3,182,442 + CA264_13610 0.76 +0.7 3,182,442 + CA264_13610 0.76 +1.2 3,182,442 + CA264_13610 0.76 -0.2 3,182,442 + CA264_13610 0.76 +0.5 3,182,442 + CA264_13610 0.76 -0.5 3,182,442 + CA264_13610 0.76 -0.6 3,182,442 + CA264_13610 0.76 -1.6 3,182,443 - CA264_13610 0.76 +0.4 3,182,659 + -0.2 3,182,668 - -0.3 3,182,684 + +0.4 3,182,685 - -0.1 3,182,710 + -0.1 3,182,710 + +0.3 3,182,711 - -0.1 3,182,722 + -0.2 3,182,762 - -0.4 3,182,774 - +0.1 3,182,777 + +0.3 3,182,790 - -0.4 3,182,793 + -0.2 3,182,800 - -0.3 3,182,812 + +1.8 3,182,813 - +0.9 3,182,829 + +1.2 3,182,830 - -0.1 3,182,988 - -0.0 3,183,006 + -0.3 3,183,014 - -0.7 3,183,014 - -0.6 3,183,081 - CA264_13615 0.13 +0.7 3,183,113 + CA264_13615 0.14 +0.3 3,183,114 - CA264_13615 0.14 +0.5 3,183,121 - CA264_13615 0.15 -0.6 3,183,228 + CA264_13615 0.20 +0.4 3,183,253 + CA264_13615 0.21 +0.7 3,183,253 + CA264_13615 0.21 -0.3 3,183,253 + CA264_13615 0.21 -0.1 3,183,255 + CA264_13615 0.21 +0.2 3,183,389 + CA264_13615 0.28 -0.3 3,183,404 - CA264_13615 0.28 +0.6 3,183,474 - CA264_13615 0.32 +2.2 3,183,494 + CA264_13615 0.33 -0.0 3,183,495 - CA264_13615 0.33 +1.0 3,183,511 + CA264_13615 0.33 +0.1 3,183,533 + CA264_13615 0.34 +0.1 3,183,534 - CA264_13615 0.34 +0.4 3,183,576 - CA264_13615 0.36 -0.1 3,183,623 - CA264_13615 0.39 -0.3 3,183,690 - CA264_13615 0.42 +0.6 3,183,690 - CA264_13615 0.42 -0.6
Or see this region's nucleotide sequence