Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13465 and CA264_13470 are separated by 59 nucleotides CA264_13470 and CA264_13475 are separated by 18 nucleotides CA264_13475 and CA264_13480 are separated by 151 nucleotides
CA264_13465: CA264_13465 - hypothetical protein, at 3,145,445 to 3,146,212
_13465
CA264_13470: CA264_13470 - cysteine synthase A, at 3,146,272 to 3,147,189
_13470
CA264_13475: CA264_13475 - serine acetyltransferase, at 3,147,208 to 3,148,041
_13475
CA264_13480: CA264_13480 - hypothetical protein, at 3,148,193 to 3,148,840
_13480
Position (kb)
3147
3148
3149 Strain fitness (log2 ratio)
-2
-1
0
1 at 3146.273 kb on + strand at 3146.273 kb on + strand at 3146.503 kb on - strand, within CA264_13470 at 3146.732 kb on - strand, within CA264_13470 at 3148.058 kb on + strand at 3148.078 kb on + strand at 3148.108 kb on - strand at 3148.113 kb on - strand at 3148.133 kb on + strand at 3148.133 kb on + strand at 3148.134 kb on - strand at 3148.175 kb on + strand at 3148.184 kb on - strand at 3148.465 kb on + strand, within CA264_13480 at 3148.465 kb on + strand, within CA264_13480 at 3148.564 kb on + strand, within CA264_13480 at 3148.630 kb on - strand, within CA264_13480 at 3148.687 kb on - strand, within CA264_13480 at 3148.852 kb on + strand at 3148.853 kb on - strand at 3148.910 kb on + strand at 3148.939 kb on + strand at 3148.955 kb on - strand at 3148.956 kb on + strand at 3148.956 kb on + strand at 3148.957 kb on - strand at 3148.979 kb on - strand at 3149.002 kb on + strand at 3149.003 kb on - strand at 3149.008 kb on + strand at 3149.009 kb on - strand at 3149.010 kb on + strand at 3149.011 kb on - strand at 3149.011 kb on - strand at 3149.019 kb on + strand at 3149.035 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 3,146,273 + -1.0 3,146,273 + -2.0 3,146,503 - CA264_13470 0.25 -0.2 3,146,732 - CA264_13470 0.50 -0.4 3,148,058 + +0.5 3,148,078 + +1.5 3,148,108 - +1.2 3,148,113 - +0.7 3,148,133 + +0.9 3,148,133 + +0.3 3,148,134 - +0.8 3,148,175 + +1.1 3,148,184 - +1.1 3,148,465 + CA264_13480 0.42 +0.6 3,148,465 + CA264_13480 0.42 -1.0 3,148,564 + CA264_13480 0.57 +0.3 3,148,630 - CA264_13480 0.67 +0.8 3,148,687 - CA264_13480 0.76 +1.2 3,148,852 + -0.3 3,148,853 - +0.3 3,148,910 + +0.6 3,148,939 + -0.5 3,148,955 - +0.5 3,148,956 + -0.1 3,148,956 + -0.8 3,148,957 - +0.0 3,148,979 - +0.6 3,149,002 + +1.3 3,149,003 - +0.0 3,149,008 + -0.3 3,149,009 - +0.2 3,149,010 + -0.4 3,149,011 - -0.1 3,149,011 - +0.8 3,149,019 + -0.1 3,149,035 + +1.1
Or see this region's nucleotide sequence