Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12845 and CA264_12850 are separated by 105 nucleotides CA264_12850 and CA264_12855 are separated by 170 nucleotides CA264_12855 and CA264_12860 overlap by 1 nucleotides CA264_12860 and CA264_12865 are separated by 10 nucleotides
CA264_12845: CA264_12845 - FAD-dependent oxidoreductase, at 2,994,391 to 2,995,536
_12845
CA264_12850: CA264_12850 - hypothetical protein, at 2,995,642 to 2,995,854
_12850
CA264_12855: CA264_12855 - hypothetical protein, at 2,996,025 to 2,996,267
_12855
CA264_12860: CA264_12860 - hypothetical protein, at 2,996,267 to 2,996,773
_12860
CA264_12865: CA264_12865 - Zn-dependent hydrolase, at 2,996,784 to 2,998,445
_12865
Position (kb)
2996
2997 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2995.341 kb on - strand, within CA264_12845 at 2995.364 kb on + strand, within CA264_12845 at 2995.387 kb on - strand, within CA264_12845 at 2995.470 kb on + strand at 2995.532 kb on + strand at 2995.532 kb on + strand at 2995.532 kb on + strand at 2995.533 kb on - strand at 2995.534 kb on + strand at 2995.534 kb on + strand at 2995.534 kb on + strand at 2995.534 kb on + strand at 2995.534 kb on + strand at 2995.535 kb on - strand at 2995.535 kb on - strand at 2995.535 kb on - strand at 2995.535 kb on - strand at 2995.535 kb on - strand at 2995.562 kb on - strand at 2995.562 kb on - strand at 2995.568 kb on + strand at 2995.568 kb on + strand at 2995.568 kb on + strand at 2995.568 kb on + strand at 2995.569 kb on - strand at 2995.569 kb on - strand at 2995.620 kb on + strand at 2995.620 kb on + strand at 2995.643 kb on + strand at 2995.644 kb on - strand at 2995.722 kb on - strand, within CA264_12850 at 2995.722 kb on - strand, within CA264_12850 at 2995.733 kb on + strand, within CA264_12850 at 2995.733 kb on + strand, within CA264_12850 at 2995.734 kb on - strand, within CA264_12850 at 2995.772 kb on + strand, within CA264_12850 at 2995.773 kb on - strand, within CA264_12850 at 2995.774 kb on + strand, within CA264_12850 at 2995.841 kb on + strand at 2995.903 kb on - strand at 2995.907 kb on + strand at 2996.010 kb on + strand at 2996.011 kb on - strand at 2996.024 kb on - strand at 2996.042 kb on + strand at 2996.042 kb on + strand at 2996.042 kb on + strand at 2996.043 kb on - strand at 2996.049 kb on + strand at 2996.049 kb on + strand at 2996.050 kb on - strand, within CA264_12855 at 2996.055 kb on - strand, within CA264_12855 at 2996.205 kb on + strand, within CA264_12855 at 2996.206 kb on - strand, within CA264_12855 at 2996.269 kb on - strand at 2996.538 kb on + strand, within CA264_12860 at 2996.539 kb on - strand, within CA264_12860 at 2996.562 kb on - strand, within CA264_12860 at 2996.634 kb on + strand, within CA264_12860 at 2996.634 kb on + strand, within CA264_12860 at 2996.634 kb on + strand, within CA264_12860 at 2996.727 kb on + strand at 2996.727 kb on + strand at 2996.728 kb on - strand at 2996.728 kb on - strand at 2996.803 kb on - strand at 2996.803 kb on - strand at 2996.803 kb on - strand at 2996.823 kb on + strand at 2996.823 kb on + strand at 2997.142 kb on + strand, within CA264_12865 at 2997.142 kb on + strand, within CA264_12865 at 2997.142 kb on + strand, within CA264_12865 at 2997.142 kb on + strand, within CA264_12865 at 2997.142 kb on + strand, within CA264_12865 at 2997.142 kb on + strand, within CA264_12865 at 2997.143 kb on - strand, within CA264_12865 at 2997.143 kb on - strand, within CA264_12865 at 2997.143 kb on - strand, within CA264_12865 at 2997.199 kb on + strand, within CA264_12865 at 2997.200 kb on - strand, within CA264_12865 at 2997.200 kb on - strand, within CA264_12865 at 2997.354 kb on + strand, within CA264_12865 at 2997.355 kb on - strand, within CA264_12865 at 2997.358 kb on + strand, within CA264_12865 at 2997.359 kb on - strand, within CA264_12865 at 2997.465 kb on + strand, within CA264_12865 at 2997.466 kb on - strand, within CA264_12865 at 2997.538 kb on + strand, within CA264_12865 at 2997.590 kb on + strand, within CA264_12865 at 2997.689 kb on - strand, within CA264_12865 at 2997.730 kb on + strand, within CA264_12865 at 2997.750 kb on - strand, within CA264_12865
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 2,995,341 - CA264_12845 0.83 +0.3 2,995,364 + CA264_12845 0.85 -0.3 2,995,387 - CA264_12845 0.87 +1.2 2,995,470 + -0.4 2,995,532 + +0.7 2,995,532 + +1.2 2,995,532 + +0.0 2,995,533 - +0.5 2,995,534 + +0.5 2,995,534 + -1.3 2,995,534 + -0.1 2,995,534 + -0.7 2,995,534 + -0.6 2,995,535 - -0.4 2,995,535 - +0.2 2,995,535 - -0.1 2,995,535 - +1.1 2,995,535 - +0.2 2,995,562 - +1.3 2,995,562 - -1.3 2,995,568 + -0.1 2,995,568 + +1.0 2,995,568 + -0.1 2,995,568 + +0.8 2,995,569 - -0.0 2,995,569 - -0.5 2,995,620 + +0.0 2,995,620 + +0.4 2,995,643 + -1.3 2,995,644 - -1.1 2,995,722 - CA264_12850 0.38 +0.1 2,995,722 - CA264_12850 0.38 -0.7 2,995,733 + CA264_12850 0.43 +0.4 2,995,733 + CA264_12850 0.43 +0.5 2,995,734 - CA264_12850 0.43 +0.0 2,995,772 + CA264_12850 0.61 -0.2 2,995,773 - CA264_12850 0.62 +0.3 2,995,774 + CA264_12850 0.62 +0.1 2,995,841 + -0.4 2,995,903 - +0.1 2,995,907 + -1.0 2,996,010 + +2.1 2,996,011 - -0.4 2,996,024 - +0.4 2,996,042 + +1.2 2,996,042 + -0.7 2,996,042 + +0.2 2,996,043 - +0.1 2,996,049 + -0.1 2,996,049 + -0.4 2,996,050 - CA264_12855 0.10 +0.1 2,996,055 - CA264_12855 0.12 -0.0 2,996,205 + CA264_12855 0.74 +0.3 2,996,206 - CA264_12855 0.74 +1.0 2,996,269 - +0.3 2,996,538 + CA264_12860 0.53 -0.3 2,996,539 - CA264_12860 0.54 +0.5 2,996,562 - CA264_12860 0.58 -0.4 2,996,634 + CA264_12860 0.72 +0.9 2,996,634 + CA264_12860 0.72 -0.9 2,996,634 + CA264_12860 0.72 +0.5 2,996,727 + -0.3 2,996,727 + +0.7 2,996,728 - +0.1 2,996,728 - -0.5 2,996,803 - -0.1 2,996,803 - -0.2 2,996,803 - +0.1 2,996,823 + +0.5 2,996,823 + +2.0 2,997,142 + CA264_12865 0.22 -0.0 2,997,142 + CA264_12865 0.22 -0.7 2,997,142 + CA264_12865 0.22 -0.2 2,997,142 + CA264_12865 0.22 -0.3 2,997,142 + CA264_12865 0.22 +0.1 2,997,142 + CA264_12865 0.22 -0.1 2,997,143 - CA264_12865 0.22 +0.1 2,997,143 - CA264_12865 0.22 +0.1 2,997,143 - CA264_12865 0.22 +0.5 2,997,199 + CA264_12865 0.25 -0.5 2,997,200 - CA264_12865 0.25 +0.3 2,997,200 - CA264_12865 0.25 -1.1 2,997,354 + CA264_12865 0.34 -0.2 2,997,355 - CA264_12865 0.34 +0.2 2,997,358 + CA264_12865 0.35 +0.5 2,997,359 - CA264_12865 0.35 -0.1 2,997,465 + CA264_12865 0.41 +0.3 2,997,466 - CA264_12865 0.41 -0.5 2,997,538 + CA264_12865 0.45 -0.9 2,997,590 + CA264_12865 0.48 -0.0 2,997,689 - CA264_12865 0.54 -0.7 2,997,730 + CA264_12865 0.57 -1.9 2,997,750 - CA264_12865 0.58 -0.3
Or see this region's nucleotide sequence