Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11040 and CA264_11045 are separated by 168 nucleotides CA264_11045 and CA264_11050 are separated by 96 nucleotides CA264_11050 and CA264_11055 are separated by 116 nucleotides
CA264_11040: CA264_11040 - tRNA nucleotidyltransferase, at 2,549,506 to 2,550,939
_11040
CA264_11045: CA264_11045 - threonylcarbamoyl-AMP synthase, at 2,551,108 to 2,551,680
_11045
CA264_11050: CA264_11050 - methylmalonyl-CoA epimerase, at 2,551,777 to 2,552,178
_11050
CA264_11055: CA264_11055 - cysteine desulfurase, at 2,552,295 to 2,553,509
_11055
Position (kb)
2551
2552
2553 Strain fitness (log2 ratio)
-2
-1
0
1 at 2551.040 kb on + strand at 2551.040 kb on + strand at 2551.078 kb on + strand at 2551.079 kb on - strand at 2551.079 kb on - strand at 2551.109 kb on + strand at 2551.110 kb on - strand at 2551.669 kb on + strand at 2551.783 kb on + strand at 2551.924 kb on + strand, within CA264_11050 at 2551.924 kb on + strand, within CA264_11050 at 2551.924 kb on + strand, within CA264_11050 at 2551.947 kb on + strand, within CA264_11050 at 2551.947 kb on + strand, within CA264_11050 at 2551.948 kb on - strand, within CA264_11050 at 2552.038 kb on + strand, within CA264_11050 at 2552.090 kb on + strand, within CA264_11050 at 2552.090 kb on + strand, within CA264_11050 at 2552.161 kb on - strand at 2552.167 kb on + strand at 2552.168 kb on - strand at 2552.190 kb on - strand at 2552.202 kb on + strand at 2552.239 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 2,551,040 + -0.5 2,551,040 + -0.3 2,551,078 + -0.0 2,551,079 - +0.2 2,551,079 - +0.1 2,551,109 + +0.3 2,551,110 - -0.5 2,551,669 + -1.6 2,551,783 + -2.3 2,551,924 + CA264_11050 0.37 -1.4 2,551,924 + CA264_11050 0.37 -0.6 2,551,924 + CA264_11050 0.37 -1.5 2,551,947 + CA264_11050 0.42 -0.7 2,551,947 + CA264_11050 0.42 -1.8 2,551,948 - CA264_11050 0.43 +0.5 2,552,038 + CA264_11050 0.65 -2.5 2,552,090 + CA264_11050 0.78 -1.5 2,552,090 + CA264_11050 0.78 -0.8 2,552,161 - -1.8 2,552,167 + -0.7 2,552,168 - -1.1 2,552,190 - -0.4 2,552,202 + +1.3 2,552,239 + -2.6
Or see this region's nucleotide sequence