Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09345 and CA264_09350 are separated by 193 nucleotides CA264_09350 and CA264_09355 are separated by 351 nucleotides
CA264_09345: CA264_09345 - 4-hydroxyphenylpyruvate dioxygenase, at 2,183,679 to 2,184,773
_09345
CA264_09350: CA264_09350 - phosphoglucomutase, at 2,184,967 to 2,186,700
_09350
CA264_09355: CA264_09355 - nitroreductase, at 2,187,052 to 2,187,639
_09355
Position (kb)
2184
2185
2186
2187 Strain fitness (log2 ratio)
-2
-1
0
1 at 2184.022 kb on + strand, within CA264_09345 at 2184.083 kb on + strand, within CA264_09345 at 2184.134 kb on - strand, within CA264_09345 at 2184.178 kb on - strand, within CA264_09345 at 2184.178 kb on - strand, within CA264_09345 at 2184.178 kb on - strand, within CA264_09345 at 2184.202 kb on + strand, within CA264_09345 at 2184.238 kb on - strand, within CA264_09345 at 2184.343 kb on - strand, within CA264_09345 at 2184.347 kb on + strand, within CA264_09345 at 2184.402 kb on + strand, within CA264_09345 at 2184.472 kb on + strand, within CA264_09345 at 2184.507 kb on + strand, within CA264_09345 at 2184.507 kb on + strand, within CA264_09345 at 2184.522 kb on + strand, within CA264_09345 at 2184.523 kb on - strand, within CA264_09345 at 2184.523 kb on - strand, within CA264_09345 at 2184.525 kb on + strand, within CA264_09345 at 2184.525 kb on + strand, within CA264_09345 at 2184.526 kb on - strand, within CA264_09345 at 2184.526 kb on - strand, within CA264_09345 at 2184.526 kb on - strand, within CA264_09345 at 2184.578 kb on + strand at 2184.579 kb on - strand, within CA264_09345 at 2184.579 kb on - strand, within CA264_09345 at 2184.618 kb on + strand, within CA264_09345 at 2184.669 kb on + strand at 2184.720 kb on - strand at 2184.771 kb on + strand at 2184.772 kb on - strand at 2184.800 kb on - strand at 2184.828 kb on + strand at 2184.829 kb on - strand at 2184.830 kb on + strand at 2184.830 kb on + strand at 2184.830 kb on + strand at 2184.830 kb on + strand at 2184.830 kb on + strand at 2184.830 kb on + strand at 2184.830 kb on + strand at 2184.831 kb on - strand at 2184.834 kb on + strand at 2184.834 kb on + strand at 2184.836 kb on + strand at 2184.945 kb on - strand at 2184.967 kb on - strand at 2186.698 kb on + strand at 2186.699 kb on - strand at 2186.709 kb on - strand at 2186.838 kb on + strand at 2186.995 kb on - strand at 2186.995 kb on - strand at 2187.000 kb on + strand at 2187.072 kb on + strand at 2187.074 kb on + strand at 2187.086 kb on + strand at 2187.086 kb on + strand at 2187.213 kb on + strand, within CA264_09355 at 2187.218 kb on + strand, within CA264_09355 at 2187.221 kb on - strand, within CA264_09355 at 2187.266 kb on + strand, within CA264_09355 at 2187.291 kb on + strand, within CA264_09355 at 2187.472 kb on + strand, within CA264_09355 at 2187.473 kb on - strand, within CA264_09355 at 2187.528 kb on - strand, within CA264_09355 at 2187.604 kb on - strand at 2187.657 kb on + strand at 2187.658 kb on - strand at 2187.658 kb on - strand at 2187.658 kb on - strand at 2187.658 kb on - strand at 2187.660 kb on + strand at 2187.663 kb on - strand at 2187.677 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 2,184,022 + CA264_09345 0.31 -0.2 2,184,083 + CA264_09345 0.37 -0.4 2,184,134 - CA264_09345 0.42 +0.2 2,184,178 - CA264_09345 0.46 -0.6 2,184,178 - CA264_09345 0.46 -0.1 2,184,178 - CA264_09345 0.46 +0.3 2,184,202 + CA264_09345 0.48 +0.7 2,184,238 - CA264_09345 0.51 -0.8 2,184,343 - CA264_09345 0.61 -0.4 2,184,347 + CA264_09345 0.61 +0.9 2,184,402 + CA264_09345 0.66 -0.7 2,184,472 + CA264_09345 0.72 -0.8 2,184,507 + CA264_09345 0.76 -1.3 2,184,507 + CA264_09345 0.76 +0.7 2,184,522 + CA264_09345 0.77 -0.3 2,184,523 - CA264_09345 0.77 -0.1 2,184,523 - CA264_09345 0.77 -0.1 2,184,525 + CA264_09345 0.77 -0.5 2,184,525 + CA264_09345 0.77 -0.2 2,184,526 - CA264_09345 0.77 -0.1 2,184,526 - CA264_09345 0.77 -0.0 2,184,526 - CA264_09345 0.77 -0.1 2,184,578 + +1.7 2,184,579 - CA264_09345 0.82 -0.6 2,184,579 - CA264_09345 0.82 -0.1 2,184,618 + CA264_09345 0.86 -1.1 2,184,669 + -0.1 2,184,720 - +0.2 2,184,771 + -0.4 2,184,772 - -0.1 2,184,800 - -0.1 2,184,828 + +0.3 2,184,829 - +0.3 2,184,830 + +0.1 2,184,830 + -0.2 2,184,830 + -2.1 2,184,830 + -0.7 2,184,830 + -0.3 2,184,830 + -1.3 2,184,830 + -0.5 2,184,831 - -0.0 2,184,834 + +0.1 2,184,834 + -0.5 2,184,836 + +0.4 2,184,945 - -1.9 2,184,967 - -0.7 2,186,698 + +0.2 2,186,699 - -0.4 2,186,709 - -0.2 2,186,838 + +0.2 2,186,995 - -0.5 2,186,995 - +0.0 2,187,000 + +1.5 2,187,072 + +1.4 2,187,074 + +0.1 2,187,086 + -0.4 2,187,086 + -0.7 2,187,213 + CA264_09355 0.27 +0.2 2,187,218 + CA264_09355 0.28 +0.1 2,187,221 - CA264_09355 0.29 -0.4 2,187,266 + CA264_09355 0.36 -2.1 2,187,291 + CA264_09355 0.41 -0.0 2,187,472 + CA264_09355 0.71 +0.8 2,187,473 - CA264_09355 0.72 +1.0 2,187,528 - CA264_09355 0.81 -0.3 2,187,604 - -0.7 2,187,657 + -0.0 2,187,658 - +0.0 2,187,658 - +0.1 2,187,658 - +0.8 2,187,658 - -0.2 2,187,660 + +0.4 2,187,663 - +0.2 2,187,677 - -0.1
Or see this region's nucleotide sequence