Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06920 and CA264_06925 are separated by 130 nucleotides CA264_06925 and CA264_06930 are separated by 23 nucleotides CA264_06930 and CA264_06935 overlap by 38 nucleotides
CA264_06920: CA264_06920 - ketol-acid reductoisomerase, at 1,599,362 to 1,600,408
_06920
CA264_06925: CA264_06925 - acetolactate synthase small subunit, at 1,600,539 to 1,601,147
_06925
CA264_06930: CA264_06930 - acetolactate synthase, large subunit, biosynthetic type, at 1,601,171 to 1,602,904
_06930
CA264_06935: CA264_06935 - dihydroxy-acid dehydratase, at 1,602,867 to 1,604,585
_06935
Position (kb)
1601
1602
1603 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1600.181 kb on + strand, within CA264_06920 at 1600.198 kb on + strand, within CA264_06920 at 1600.199 kb on - strand, within CA264_06920 at 1600.238 kb on + strand, within CA264_06920 at 1600.238 kb on + strand, within CA264_06920 at 1600.382 kb on + strand at 1600.423 kb on + strand at 1600.430 kb on - strand at 1600.430 kb on - strand at 1600.492 kb on + strand at 1600.493 kb on - strand at 1600.574 kb on - strand at 1600.762 kb on + strand, within CA264_06925 at 1600.762 kb on + strand, within CA264_06925 at 1600.763 kb on - strand, within CA264_06925 at 1600.895 kb on + strand, within CA264_06925 at 1600.900 kb on + strand, within CA264_06925 at 1600.903 kb on - strand, within CA264_06925 at 1600.929 kb on + strand, within CA264_06925 at 1601.099 kb on - strand at 1601.147 kb on + strand at 1601.147 kb on + strand at 1601.148 kb on - strand at 1601.148 kb on - strand at 1601.148 kb on - strand at 1601.148 kb on - strand at 1601.151 kb on + strand at 1601.151 kb on + strand at 1601.151 kb on + strand at 1601.151 kb on + strand at 1601.151 kb on + strand at 1601.152 kb on - strand at 1601.152 kb on - strand at 1601.161 kb on + strand at 1601.172 kb on + strand at 1601.192 kb on + strand at 1601.193 kb on - strand at 1601.193 kb on - strand at 1601.259 kb on + strand at 1601.259 kb on + strand at 1601.301 kb on - strand at 1601.357 kb on + strand, within CA264_06930 at 1601.357 kb on + strand, within CA264_06930 at 1601.358 kb on - strand, within CA264_06930 at 1601.466 kb on - strand, within CA264_06930 at 1601.485 kb on + strand, within CA264_06930 at 1601.486 kb on - strand, within CA264_06930 at 1601.488 kb on + strand, within CA264_06930 at 1601.488 kb on + strand, within CA264_06930 at 1601.489 kb on - strand, within CA264_06930 at 1601.489 kb on - strand, within CA264_06930 at 1601.489 kb on - strand, within CA264_06930 at 1601.489 kb on - strand, within CA264_06930 at 1601.489 kb on - strand, within CA264_06930 at 1601.565 kb on + strand, within CA264_06930 at 1601.570 kb on - strand, within CA264_06930 at 1601.570 kb on - strand, within CA264_06930 at 1601.814 kb on + strand, within CA264_06930 at 1601.831 kb on + strand, within CA264_06930 at 1601.842 kb on + strand, within CA264_06930 at 1601.843 kb on - strand, within CA264_06930 at 1601.949 kb on - strand, within CA264_06930 at 1601.949 kb on - strand, within CA264_06930 at 1601.982 kb on + strand, within CA264_06930 at 1602.034 kb on + strand, within CA264_06930 at 1602.072 kb on + strand, within CA264_06930 at 1602.232 kb on + strand, within CA264_06930 at 1602.232 kb on + strand, within CA264_06930 at 1602.233 kb on - strand, within CA264_06930 at 1602.233 kb on - strand, within CA264_06930 at 1602.233 kb on - strand, within CA264_06930 at 1602.279 kb on + strand, within CA264_06930 at 1602.420 kb on + strand, within CA264_06930 at 1602.420 kb on + strand, within CA264_06930 at 1602.421 kb on - strand, within CA264_06930 at 1602.549 kb on + strand, within CA264_06930 at 1602.550 kb on - strand, within CA264_06930 at 1602.550 kb on - strand, within CA264_06930 at 1602.656 kb on + strand, within CA264_06930 at 1602.656 kb on + strand, within CA264_06930 at 1602.679 kb on - strand, within CA264_06930 at 1602.742 kb on + strand at 1602.743 kb on - strand at 1602.752 kb on + strand at 1602.753 kb on - strand at 1602.762 kb on + strand at 1602.762 kb on + strand at 1602.762 kb on + strand at 1602.762 kb on + strand at 1602.763 kb on - strand at 1602.763 kb on - strand at 1602.763 kb on - strand at 1602.776 kb on - strand at 1602.899 kb on + strand at 1602.926 kb on + strand at 1602.969 kb on + strand at 1603.123 kb on + strand, within CA264_06935 at 1603.124 kb on - strand, within CA264_06935 at 1603.124 kb on - strand, within CA264_06935 at 1603.236 kb on - strand, within CA264_06935 at 1603.278 kb on + strand, within CA264_06935 at 1603.279 kb on - strand, within CA264_06935 at 1603.311 kb on + strand, within CA264_06935 at 1603.326 kb on - strand, within CA264_06935 at 1603.338 kb on - strand, within CA264_06935 at 1603.364 kb on + strand, within CA264_06935 at 1603.364 kb on + strand, within CA264_06935 at 1603.365 kb on - strand, within CA264_06935 at 1603.441 kb on - strand, within CA264_06935 at 1603.649 kb on - strand, within CA264_06935 at 1603.725 kb on + strand, within CA264_06935
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 1,600,181 + CA264_06920 0.78 +0.3 1,600,198 + CA264_06920 0.80 +0.2 1,600,199 - CA264_06920 0.80 +0.5 1,600,238 + CA264_06920 0.84 -0.5 1,600,238 + CA264_06920 0.84 -0.9 1,600,382 + -0.6 1,600,423 + -0.4 1,600,430 - -0.2 1,600,430 - -1.3 1,600,492 + -0.8 1,600,493 - -0.1 1,600,574 - -2.1 1,600,762 + CA264_06925 0.37 -0.4 1,600,762 + CA264_06925 0.37 +0.0 1,600,763 - CA264_06925 0.37 +0.9 1,600,895 + CA264_06925 0.58 +1.2 1,600,900 + CA264_06925 0.59 -0.4 1,600,903 - CA264_06925 0.60 -0.2 1,600,929 + CA264_06925 0.64 +1.1 1,601,099 - -0.7 1,601,147 + -1.0 1,601,147 + -0.8 1,601,148 - -0.1 1,601,148 - +0.1 1,601,148 - -0.8 1,601,148 - -0.1 1,601,151 + +0.2 1,601,151 + -0.4 1,601,151 + -0.4 1,601,151 + -0.0 1,601,151 + +0.4 1,601,152 - -0.4 1,601,152 - -0.3 1,601,161 + +0.4 1,601,172 + -0.0 1,601,192 + +0.2 1,601,193 - -0.0 1,601,193 - +0.5 1,601,259 + +0.2 1,601,259 + -1.3 1,601,301 - -1.3 1,601,357 + CA264_06930 0.11 -0.0 1,601,357 + CA264_06930 0.11 -0.1 1,601,358 - CA264_06930 0.11 -0.9 1,601,466 - CA264_06930 0.17 -0.1 1,601,485 + CA264_06930 0.18 -0.5 1,601,486 - CA264_06930 0.18 +0.6 1,601,488 + CA264_06930 0.18 +0.5 1,601,488 + CA264_06930 0.18 -0.5 1,601,489 - CA264_06930 0.18 -0.6 1,601,489 - CA264_06930 0.18 -1.3 1,601,489 - CA264_06930 0.18 +0.5 1,601,489 - CA264_06930 0.18 +1.5 1,601,489 - CA264_06930 0.18 -0.4 1,601,565 + CA264_06930 0.23 +0.7 1,601,570 - CA264_06930 0.23 -0.3 1,601,570 - CA264_06930 0.23 -0.4 1,601,814 + CA264_06930 0.37 -0.7 1,601,831 + CA264_06930 0.38 -0.3 1,601,842 + CA264_06930 0.39 -1.1 1,601,843 - CA264_06930 0.39 -0.3 1,601,949 - CA264_06930 0.45 -0.1 1,601,949 - CA264_06930 0.45 -0.6 1,601,982 + CA264_06930 0.47 +0.4 1,602,034 + CA264_06930 0.50 -0.2 1,602,072 + CA264_06930 0.52 -0.1 1,602,232 + CA264_06930 0.61 +0.1 1,602,232 + CA264_06930 0.61 -1.0 1,602,233 - CA264_06930 0.61 +1.2 1,602,233 - CA264_06930 0.61 -0.5 1,602,233 - CA264_06930 0.61 -0.1 1,602,279 + CA264_06930 0.64 -0.6 1,602,420 + CA264_06930 0.72 +1.2 1,602,420 + CA264_06930 0.72 -0.6 1,602,421 - CA264_06930 0.72 +0.6 1,602,549 + CA264_06930 0.79 -0.2 1,602,550 - CA264_06930 0.80 +0.2 1,602,550 - CA264_06930 0.80 -0.2 1,602,656 + CA264_06930 0.86 +0.0 1,602,656 + CA264_06930 0.86 -0.5 1,602,679 - CA264_06930 0.87 -0.6 1,602,742 + -0.8 1,602,743 - -0.4 1,602,752 + -0.3 1,602,753 - -0.6 1,602,762 + -0.4 1,602,762 + +0.6 1,602,762 + +0.2 1,602,762 + +0.0 1,602,763 - -1.4 1,602,763 - -1.3 1,602,763 - -0.5 1,602,776 - +0.2 1,602,899 + -1.6 1,602,926 + -1.2 1,602,969 + -0.3 1,603,123 + CA264_06935 0.15 -0.4 1,603,124 - CA264_06935 0.15 +0.5 1,603,124 - CA264_06935 0.15 -0.5 1,603,236 - CA264_06935 0.21 -0.8 1,603,278 + CA264_06935 0.24 -0.5 1,603,279 - CA264_06935 0.24 -1.1 1,603,311 + CA264_06935 0.26 -0.5 1,603,326 - CA264_06935 0.27 -0.8 1,603,338 - CA264_06935 0.27 +0.6 1,603,364 + CA264_06935 0.29 -0.9 1,603,364 + CA264_06935 0.29 -0.9 1,603,365 - CA264_06935 0.29 -2.5 1,603,441 - CA264_06935 0.33 +0.5 1,603,649 - CA264_06935 0.45 -0.3 1,603,725 + CA264_06935 0.50 +2.2
Or see this region's nucleotide sequence