Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05200 and CA264_05205 are separated by 119 nucleotides CA264_05205 and CA264_05210 are separated by 58 nucleotides CA264_05210 and CA264_05215 are separated by 58 nucleotides CA264_05215 and CA264_05220 are separated by 223 nucleotides CA264_05220 and CA264_05225 are separated by 135 nucleotides CA264_05225 and CA264_05230 are separated by 1 nucleotides
CA264_05200: CA264_05200 - GDP-mannose 4,6-dehydratase, at 1,207,408 to 1,208,520
_05200
CA264_05205: CA264_05205 - tRNA-Asp, at 1,208,640 to 1,208,713
_05205
CA264_05210: CA264_05210 - tRNA-Asp, at 1,208,772 to 1,208,845
_05210
CA264_05215: CA264_05215 - tRNA-Asp, at 1,208,904 to 1,208,977
_05215
CA264_05220: CA264_05220 - acetyl-CoA carboxylase carboxyl transferase subunit alpha, at 1,209,201 to 1,210,151
_05220
CA264_05225: CA264_05225 - MBL fold metallo-hydrolase, at 1,210,287 to 1,211,129
_05225
CA264_05230: CA264_05230 - hypothetical protein, at 1,211,131 to 1,211,901
_05230
Position (kb)
1209
1210
1211 Strain fitness (log2 ratio)
-2
-1
0
1 at 1208.214 kb on - strand, within CA264_05200 at 1208.260 kb on + strand, within CA264_05200 at 1208.260 kb on + strand, within CA264_05200 at 1208.261 kb on - strand, within CA264_05200 at 1208.322 kb on - strand, within CA264_05200 at 1208.388 kb on + strand, within CA264_05200 at 1208.389 kb on - strand, within CA264_05200 at 1208.410 kb on + strand at 1208.477 kb on - strand at 1208.529 kb on + strand at 1208.534 kb on + strand at 1208.534 kb on + strand at 1208.535 kb on - strand at 1208.535 kb on - strand at 1208.535 kb on - strand at 1208.536 kb on + strand at 1208.536 kb on + strand at 1208.536 kb on + strand at 1208.537 kb on - strand at 1208.537 kb on - strand at 1208.540 kb on - strand at 1208.583 kb on - strand at 1208.583 kb on - strand at 1209.062 kb on + strand at 1209.071 kb on - strand at 1209.086 kb on - strand at 1209.089 kb on - strand at 1209.129 kb on + strand at 1210.124 kb on + strand at 1210.168 kb on - strand at 1210.181 kb on + strand at 1210.243 kb on - strand at 1210.248 kb on + strand at 1210.249 kb on - strand at 1210.249 kb on - strand at 1210.252 kb on + strand at 1210.254 kb on + strand at 1210.325 kb on - strand at 1210.349 kb on - strand at 1210.394 kb on + strand, within CA264_05225 at 1210.421 kb on + strand, within CA264_05225 at 1210.421 kb on + strand, within CA264_05225 at 1210.421 kb on + strand, within CA264_05225 at 1210.421 kb on + strand, within CA264_05225 at 1210.422 kb on - strand, within CA264_05225 at 1210.449 kb on - strand, within CA264_05225 at 1210.449 kb on - strand, within CA264_05225 at 1210.670 kb on + strand, within CA264_05225 at 1210.670 kb on + strand, within CA264_05225 at 1210.675 kb on - strand, within CA264_05225 at 1210.675 kb on - strand, within CA264_05225 at 1210.751 kb on + strand, within CA264_05225 at 1210.878 kb on + strand, within CA264_05225 at 1210.879 kb on - strand, within CA264_05225 at 1210.899 kb on + strand, within CA264_05225 at 1210.900 kb on - strand, within CA264_05225 at 1210.900 kb on - strand, within CA264_05225 at 1210.932 kb on - strand, within CA264_05225 at 1210.945 kb on - strand, within CA264_05225 at 1211.054 kb on - strand at 1211.054 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 1,208,214 - CA264_05200 0.72 -0.3 1,208,260 + CA264_05200 0.77 -0.5 1,208,260 + CA264_05200 0.77 +0.2 1,208,261 - CA264_05200 0.77 -1.0 1,208,322 - CA264_05200 0.82 -0.4 1,208,388 + CA264_05200 0.88 -0.1 1,208,389 - CA264_05200 0.88 -0.1 1,208,410 + -1.1 1,208,477 - -0.8 1,208,529 + -0.3 1,208,534 + +0.4 1,208,534 + -0.8 1,208,535 - +0.4 1,208,535 - +0.2 1,208,535 - -0.5 1,208,536 + +0.1 1,208,536 + +0.7 1,208,536 + -0.1 1,208,537 - -1.8 1,208,537 - -0.2 1,208,540 - +0.2 1,208,583 - -0.5 1,208,583 - -1.2 1,209,062 + +0.4 1,209,071 - -0.3 1,209,086 - -0.1 1,209,089 - +0.3 1,209,129 + -0.1 1,210,124 + +0.4 1,210,168 - -0.0 1,210,181 + -0.4 1,210,243 - +0.1 1,210,248 + +0.6 1,210,249 - +0.0 1,210,249 - -0.2 1,210,252 + -0.8 1,210,254 + -0.2 1,210,325 - +0.7 1,210,349 - +0.4 1,210,394 + CA264_05225 0.13 -0.1 1,210,421 + CA264_05225 0.16 -0.3 1,210,421 + CA264_05225 0.16 -0.6 1,210,421 + CA264_05225 0.16 -0.1 1,210,421 + CA264_05225 0.16 -0.1 1,210,422 - CA264_05225 0.16 -0.7 1,210,449 - CA264_05225 0.19 -0.0 1,210,449 - CA264_05225 0.19 +0.5 1,210,670 + CA264_05225 0.45 -0.4 1,210,670 + CA264_05225 0.45 +0.7 1,210,675 - CA264_05225 0.46 -0.5 1,210,675 - CA264_05225 0.46 +0.3 1,210,751 + CA264_05225 0.55 +0.1 1,210,878 + CA264_05225 0.70 +0.4 1,210,879 - CA264_05225 0.70 -0.2 1,210,899 + CA264_05225 0.73 -0.2 1,210,900 - CA264_05225 0.73 +0.4 1,210,900 - CA264_05225 0.73 -0.7 1,210,932 - CA264_05225 0.77 +0.9 1,210,945 - CA264_05225 0.78 +0.3 1,211,054 - -0.0 1,211,054 - -0.1
Or see this region's nucleotide sequence