Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03795 and CA264_03800 are separated by 352 nucleotides CA264_03800 and CA264_03805 are separated by 23 nucleotides CA264_03805 and CA264_03810 are separated by 99 nucleotides CA264_03810 and CA264_03815 are separated by 6 nucleotides
CA264_03795: CA264_03795 - 3-deoxy-manno-octulosonate cytidylyltransferase, at 888,054 to 888,788
_03795
CA264_03800: CA264_03800 - hypothetical protein, at 889,141 to 889,491
_03800
CA264_03805: CA264_03805 - serine protease, at 889,515 to 890,885
_03805
CA264_03810: CA264_03810 - hypothetical protein, at 890,985 to 891,761
_03810
CA264_03815: CA264_03815 - peptidoglycan-binding protein, at 891,768 to 892,748
_03815
Position (kb) 889
890
891 Strain fitness (log2 ratio) -1
0
1
2 at 888.780 kb on + strand at 888.795 kb on + strand at 888.796 kb on - strand at 888.803 kb on - strand at 888.821 kb on - strand at 888.905 kb on + strand at 888.991 kb on + strand at 889.042 kb on - strand at 889.042 kb on - strand at 889.058 kb on - strand at 889.073 kb on + strand at 889.076 kb on + strand at 889.077 kb on - strand at 889.077 kb on - strand at 889.078 kb on + strand at 889.095 kb on + strand at 889.140 kb on - strand at 889.145 kb on - strand at 889.238 kb on + strand, within CA264_03800 at 889.238 kb on + strand, within CA264_03800 at 889.310 kb on + strand, within CA264_03800 at 889.324 kb on + strand, within CA264_03800 at 889.324 kb on + strand, within CA264_03800 at 889.358 kb on - strand, within CA264_03800 at 889.376 kb on - strand, within CA264_03800 at 889.505 kb on + strand at 889.505 kb on + strand at 889.506 kb on - strand at 889.506 kb on - strand at 889.534 kb on - strand at 889.624 kb on + strand at 889.625 kb on - strand at 889.630 kb on - strand at 889.630 kb on - strand at 889.630 kb on - strand at 889.639 kb on - strand at 889.639 kb on - strand at 889.644 kb on - strand at 889.673 kb on - strand, within CA264_03805 at 889.769 kb on + strand, within CA264_03805 at 889.769 kb on + strand, within CA264_03805 at 889.769 kb on + strand, within CA264_03805 at 889.769 kb on + strand, within CA264_03805 at 889.851 kb on - strand, within CA264_03805 at 889.927 kb on - strand, within CA264_03805 at 889.959 kb on - strand, within CA264_03805 at 890.056 kb on + strand, within CA264_03805 at 890.056 kb on + strand, within CA264_03805 at 890.057 kb on - strand, within CA264_03805 at 890.059 kb on + strand, within CA264_03805 at 890.060 kb on - strand, within CA264_03805 at 890.060 kb on - strand, within CA264_03805 at 890.060 kb on - strand, within CA264_03805 at 890.060 kb on - strand, within CA264_03805 at 890.071 kb on + strand, within CA264_03805 at 890.072 kb on - strand, within CA264_03805 at 890.113 kb on - strand, within CA264_03805 at 890.137 kb on + strand, within CA264_03805 at 890.153 kb on + strand, within CA264_03805 at 890.337 kb on - strand, within CA264_03805 at 890.368 kb on - strand, within CA264_03805 at 890.368 kb on - strand, within CA264_03805 at 890.435 kb on + strand, within CA264_03805 at 890.449 kb on + strand, within CA264_03805 at 890.449 kb on + strand, within CA264_03805 at 890.449 kb on + strand, within CA264_03805 at 890.450 kb on - strand, within CA264_03805 at 890.458 kb on + strand, within CA264_03805 at 890.459 kb on - strand, within CA264_03805 at 890.530 kb on + strand, within CA264_03805 at 890.596 kb on + strand, within CA264_03805 at 890.596 kb on + strand, within CA264_03805 at 890.596 kb on + strand, within CA264_03805 at 890.597 kb on - strand, within CA264_03805 at 890.597 kb on - strand, within CA264_03805 at 890.846 kb on - strand at 890.848 kb on + strand at 890.848 kb on + strand at 890.848 kb on + strand at 890.848 kb on + strand at 890.849 kb on - strand at 890.902 kb on - strand at 890.923 kb on - strand at 890.925 kb on + strand at 890.946 kb on - strand at 890.946 kb on - strand at 890.946 kb on - strand at 890.946 kb on - strand at 890.951 kb on - strand at 890.951 kb on - strand at 890.951 kb on - strand at 890.963 kb on + strand at 890.963 kb on + strand at 891.067 kb on - strand, within CA264_03810 at 891.451 kb on - strand, within CA264_03810 at 891.529 kb on + strand, within CA264_03810 at 891.529 kb on + strand, within CA264_03810 at 891.530 kb on - strand, within CA264_03810 at 891.595 kb on + strand, within CA264_03810 at 891.595 kb on + strand, within CA264_03810 at 891.596 kb on - strand, within CA264_03810 at 891.608 kb on - strand, within CA264_03810 at 891.710 kb on - strand at 891.773 kb on - strand at 891.773 kb on - strand at 891.773 kb on - strand at 891.859 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 888,780 + -0.2 888,795 + +0.2 888,796 - -0.3 888,803 - +0.8 888,821 - -1.2 888,905 + -0.7 888,991 + -0.4 889,042 - -0.0 889,042 - -0.2 889,058 - -0.0 889,073 + -0.3 889,076 + +0.5 889,077 - +0.5 889,077 - +2.0 889,078 + -0.5 889,095 + -0.0 889,140 - -0.2 889,145 - +0.5 889,238 + CA264_03800 0.28 -1.6 889,238 + CA264_03800 0.28 +0.1 889,310 + CA264_03800 0.48 +0.1 889,324 + CA264_03800 0.52 +0.3 889,324 + CA264_03800 0.52 +0.1 889,358 - CA264_03800 0.62 -0.2 889,376 - CA264_03800 0.67 +0.3 889,505 + +0.0 889,505 + +0.1 889,506 - -0.2 889,506 - -0.1 889,534 - -0.0 889,624 + -0.3 889,625 - -0.2 889,630 - +1.3 889,630 - +0.3 889,630 - -0.1 889,639 - -0.7 889,639 - +1.3 889,644 - -0.6 889,673 - CA264_03805 0.12 +1.3 889,769 + CA264_03805 0.19 +1.0 889,769 + CA264_03805 0.19 +0.4 889,769 + CA264_03805 0.19 +0.1 889,769 + CA264_03805 0.19 +0.1 889,851 - CA264_03805 0.25 -0.5 889,927 - CA264_03805 0.30 -0.6 889,959 - CA264_03805 0.32 -0.8 890,056 + CA264_03805 0.39 -0.0 890,056 + CA264_03805 0.39 +0.3 890,057 - CA264_03805 0.40 +0.5 890,059 + CA264_03805 0.40 +1.0 890,060 - CA264_03805 0.40 +0.3 890,060 - CA264_03805 0.40 +0.0 890,060 - CA264_03805 0.40 -0.0 890,060 - CA264_03805 0.40 +0.2 890,071 + CA264_03805 0.41 -0.3 890,072 - CA264_03805 0.41 +0.1 890,113 - CA264_03805 0.44 -0.4 890,137 + CA264_03805 0.45 -0.0 890,153 + CA264_03805 0.47 +0.9 890,337 - CA264_03805 0.60 +0.3 890,368 - CA264_03805 0.62 -0.0 890,368 - CA264_03805 0.62 +0.5 890,435 + CA264_03805 0.67 -0.3 890,449 + CA264_03805 0.68 -0.2 890,449 + CA264_03805 0.68 +0.7 890,449 + CA264_03805 0.68 -0.9 890,450 - CA264_03805 0.68 -0.1 890,458 + CA264_03805 0.69 -0.1 890,459 - CA264_03805 0.69 -1.5 890,530 + CA264_03805 0.74 -0.5 890,596 + CA264_03805 0.79 +1.0 890,596 + CA264_03805 0.79 +0.2 890,596 + CA264_03805 0.79 -0.3 890,597 - CA264_03805 0.79 +0.0 890,597 - CA264_03805 0.79 -1.5 890,846 - +0.2 890,848 + -0.3 890,848 + +0.3 890,848 + -0.1 890,848 + +0.3 890,849 - +0.0 890,902 - -0.2 890,923 - -0.2 890,925 + +0.4 890,946 - +0.2 890,946 - -0.4 890,946 - +0.4 890,946 - -0.3 890,951 - -1.0 890,951 - -0.0 890,951 - +0.0 890,963 + +1.0 890,963 + -0.7 891,067 - CA264_03810 0.11 +0.2 891,451 - CA264_03810 0.60 +0.5 891,529 + CA264_03810 0.70 +1.0 891,529 + CA264_03810 0.70 +1.7 891,530 - CA264_03810 0.70 -0.7 891,595 + CA264_03810 0.79 +0.7 891,595 + CA264_03810 0.79 -0.6 891,596 - CA264_03810 0.79 +0.2 891,608 - CA264_03810 0.80 -1.2 891,710 - +0.3 891,773 - +0.1 891,773 - +0.7 891,773 - +0.8 891,859 + -0.7
Or see this region's nucleotide sequence