Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03585 and CA264_03590 are separated by 184 nucleotides CA264_03590 and CA264_03595 are separated by 333 nucleotides CA264_03595 and CA264_03600 are separated by 524 nucleotides
CA264_03585: CA264_03585 - hypothetical protein, at 835,725 to 836,015
_03585
CA264_03590: CA264_03590 - hypothetical protein, at 836,200 to 836,601
_03590
CA264_03595: CA264_03595 - sodium:alanine symporter, at 836,935 to 838,389
_03595
CA264_03600: CA264_03600 - ATP-dependent helicase HrpB, at 838,914 to 841,460
_03600
Position (kb) 836
837
838
839 Strain fitness (log2 ratio) -2
-1
0
1 at 836.007 kb on - strand at 836.096 kb on + strand at 836.097 kb on - strand at 836.098 kb on + strand at 836.103 kb on - strand at 836.121 kb on + strand at 836.125 kb on + strand at 836.125 kb on + strand at 836.126 kb on - strand at 836.130 kb on + strand at 836.131 kb on - strand at 836.163 kb on - strand at 836.163 kb on - strand at 836.163 kb on - strand at 836.201 kb on + strand at 836.202 kb on - strand at 836.202 kb on - strand at 836.206 kb on - strand at 836.327 kb on - strand, within CA264_03590 at 836.358 kb on + strand, within CA264_03590 at 836.379 kb on - strand, within CA264_03590 at 836.421 kb on + strand, within CA264_03590 at 836.594 kb on + strand at 836.595 kb on - strand at 836.604 kb on - strand at 836.604 kb on - strand at 836.604 kb on - strand at 836.612 kb on - strand at 836.620 kb on + strand at 836.630 kb on + strand at 836.630 kb on + strand at 836.630 kb on + strand at 836.631 kb on - strand at 836.631 kb on - strand at 836.631 kb on - strand at 836.631 kb on - strand at 836.631 kb on - strand at 836.631 kb on - strand at 836.631 kb on - strand at 836.660 kb on + strand at 836.661 kb on - strand at 836.669 kb on - strand at 836.669 kb on - strand at 836.674 kb on - strand at 836.726 kb on + strand at 836.727 kb on - strand at 836.727 kb on - strand at 836.727 kb on - strand at 836.729 kb on + strand at 836.729 kb on + strand at 836.730 kb on - strand at 836.730 kb on - strand at 836.771 kb on + strand at 836.771 kb on + strand at 836.771 kb on + strand at 836.771 kb on + strand at 836.771 kb on + strand at 836.771 kb on + strand at 836.772 kb on - strand at 836.772 kb on - strand at 836.772 kb on - strand at 836.772 kb on - strand at 836.772 kb on - strand at 836.809 kb on - strand at 836.827 kb on - strand at 836.936 kb on + strand at 836.947 kb on + strand at 837.248 kb on + strand, within CA264_03595 at 837.273 kb on - strand, within CA264_03595 at 837.275 kb on + strand, within CA264_03595 at 837.275 kb on + strand, within CA264_03595 at 837.276 kb on - strand, within CA264_03595 at 837.276 kb on - strand, within CA264_03595 at 837.278 kb on + strand, within CA264_03595 at 837.319 kb on - strand, within CA264_03595 at 837.351 kb on - strand, within CA264_03595 at 837.354 kb on + strand, within CA264_03595 at 837.355 kb on - strand, within CA264_03595 at 837.414 kb on + strand, within CA264_03595 at 837.434 kb on - strand, within CA264_03595 at 837.443 kb on + strand, within CA264_03595 at 837.444 kb on - strand, within CA264_03595 at 837.465 kb on + strand, within CA264_03595 at 837.504 kb on - strand, within CA264_03595 at 837.520 kb on + strand, within CA264_03595 at 837.521 kb on - strand, within CA264_03595 at 837.580 kb on - strand, within CA264_03595 at 837.597 kb on + strand, within CA264_03595 at 837.603 kb on - strand, within CA264_03595 at 837.752 kb on + strand, within CA264_03595 at 837.753 kb on - strand, within CA264_03595 at 837.901 kb on - strand, within CA264_03595 at 837.971 kb on + strand, within CA264_03595 at 838.002 kb on - strand, within CA264_03595 at 838.002 kb on - strand, within CA264_03595 at 838.004 kb on + strand, within CA264_03595 at 838.004 kb on + strand, within CA264_03595 at 838.046 kb on + strand, within CA264_03595 at 838.046 kb on + strand, within CA264_03595 at 838.046 kb on + strand, within CA264_03595 at 838.046 kb on + strand, within CA264_03595 at 838.046 kb on + strand, within CA264_03595 at 838.046 kb on + strand, within CA264_03595 at 838.046 kb on + strand, within CA264_03595 at 838.047 kb on - strand, within CA264_03595 at 838.047 kb on - strand, within CA264_03595 at 838.047 kb on - strand, within CA264_03595 at 838.047 kb on - strand, within CA264_03595 at 838.048 kb on + strand, within CA264_03595 at 838.062 kb on + strand, within CA264_03595 at 838.063 kb on - strand, within CA264_03595 at 838.074 kb on - strand, within CA264_03595 at 838.074 kb on - strand, within CA264_03595 at 838.310 kb on + strand at 838.310 kb on + strand at 838.333 kb on + strand at 838.333 kb on + strand at 838.396 kb on + strand at 838.397 kb on - strand at 838.437 kb on + strand at 838.494 kb on + strand at 838.495 kb on - strand at 838.495 kb on - strand at 838.517 kb on + strand at 838.550 kb on + strand at 838.592 kb on - strand at 838.593 kb on + strand at 838.645 kb on + strand at 838.699 kb on - strand at 838.757 kb on - strand at 838.785 kb on + strand at 838.785 kb on + strand at 838.786 kb on - strand at 838.820 kb on - strand at 838.852 kb on + strand at 838.852 kb on + strand at 838.874 kb on + strand at 838.875 kb on - strand at 839.055 kb on + strand at 839.367 kb on - strand, within CA264_03600
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 836,007 - -0.0 836,096 + +0.5 836,097 - -1.7 836,098 + -1.4 836,103 - -1.7 836,121 + +0.4 836,125 + -0.9 836,125 + +0.1 836,126 - -0.1 836,130 + +1.3 836,131 - +0.5 836,163 - -0.1 836,163 - -0.7 836,163 - -0.2 836,201 + -1.4 836,202 - +0.0 836,202 - -1.0 836,206 - -0.5 836,327 - CA264_03590 0.32 +0.3 836,358 + CA264_03590 0.39 +1.1 836,379 - CA264_03590 0.45 +0.9 836,421 + CA264_03590 0.55 -0.7 836,594 + +0.6 836,595 - -1.6 836,604 - +0.8 836,604 - -0.8 836,604 - +0.3 836,612 - +0.8 836,620 + -0.2 836,630 + +0.1 836,630 + +0.3 836,630 + +0.5 836,631 - +0.5 836,631 - -1.3 836,631 - -0.5 836,631 - +0.9 836,631 - -0.1 836,631 - -0.3 836,631 - -0.3 836,660 + -0.4 836,661 - +0.3 836,669 - -0.3 836,669 - -0.9 836,674 - -0.4 836,726 + +0.8 836,727 - -0.3 836,727 - -0.6 836,727 - -1.3 836,729 + +0.0 836,729 + -0.5 836,730 - +1.0 836,730 - +0.3 836,771 + +1.1 836,771 + -0.9 836,771 + -0.8 836,771 + -0.3 836,771 + +0.1 836,771 + -0.3 836,772 - -0.1 836,772 - -0.2 836,772 - -1.1 836,772 - -0.1 836,772 - +0.5 836,809 - -0.4 836,827 - -1.4 836,936 + -0.5 836,947 + -0.1 837,248 + CA264_03595 0.22 +0.7 837,273 - CA264_03595 0.23 -0.9 837,275 + CA264_03595 0.23 +1.3 837,275 + CA264_03595 0.23 +0.9 837,276 - CA264_03595 0.23 -1.2 837,276 - CA264_03595 0.23 -0.5 837,278 + CA264_03595 0.24 +0.3 837,319 - CA264_03595 0.26 -0.5 837,351 - CA264_03595 0.29 -1.9 837,354 + CA264_03595 0.29 -0.1 837,355 - CA264_03595 0.29 -0.5 837,414 + CA264_03595 0.33 -0.6 837,434 - CA264_03595 0.34 -0.8 837,443 + CA264_03595 0.35 -0.6 837,444 - CA264_03595 0.35 +0.7 837,465 + CA264_03595 0.36 -0.5 837,504 - CA264_03595 0.39 -0.7 837,520 + CA264_03595 0.40 -1.0 837,521 - CA264_03595 0.40 -0.1 837,580 - CA264_03595 0.44 -0.6 837,597 + CA264_03595 0.45 -0.3 837,603 - CA264_03595 0.46 -1.2 837,752 + CA264_03595 0.56 -0.0 837,753 - CA264_03595 0.56 -0.5 837,901 - CA264_03595 0.66 +0.0 837,971 + CA264_03595 0.71 -0.1 838,002 - CA264_03595 0.73 -0.9 838,002 - CA264_03595 0.73 +1.3 838,004 + CA264_03595 0.73 -0.5 838,004 + CA264_03595 0.73 -1.1 838,046 + CA264_03595 0.76 -0.2 838,046 + CA264_03595 0.76 -0.0 838,046 + CA264_03595 0.76 -1.4 838,046 + CA264_03595 0.76 -1.4 838,046 + CA264_03595 0.76 +0.3 838,046 + CA264_03595 0.76 -0.6 838,046 + CA264_03595 0.76 -0.1 838,047 - CA264_03595 0.76 -0.4 838,047 - CA264_03595 0.76 -0.3 838,047 - CA264_03595 0.76 +0.1 838,047 - CA264_03595 0.76 -0.4 838,048 + CA264_03595 0.76 +0.1 838,062 + CA264_03595 0.77 +0.8 838,063 - CA264_03595 0.78 -0.2 838,074 - CA264_03595 0.78 +0.7 838,074 - CA264_03595 0.78 -0.5 838,310 + -1.3 838,310 + -0.6 838,333 + +0.1 838,333 + +0.6 838,396 + +1.0 838,397 - +0.6 838,437 + +0.1 838,494 + -1.3 838,495 - -0.8 838,495 - +0.0 838,517 + +1.3 838,550 + +0.0 838,592 - +1.0 838,593 + -0.7 838,645 + -0.2 838,699 - +0.3 838,757 - +0.1 838,785 + -0.2 838,785 + +0.7 838,786 - +0.5 838,820 - +0.3 838,852 + -2.6 838,852 + +1.0 838,874 + +0.2 838,875 - -1.1 839,055 + -0.6 839,367 - CA264_03600 0.18 -0.0
Or see this region's nucleotide sequence