Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_03485

Experiment: m.b. benzoic 0.4 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_03480 and CA264_03485 are separated by 249 nucleotidesCA264_03485 and CA264_03490 are separated by 256 nucleotidesCA264_03490 and CA264_03495 are separated by 256 nucleotides CA264_03480: CA264_03480 - hypothetical protein, at 811,442 to 812,173 _03480 CA264_03485: CA264_03485 - dodecin, at 812,423 to 812,632 _03485 CA264_03490: CA264_03490 - hypothetical protein, at 812,889 to 813,335 _03490 CA264_03495: CA264_03495 - tRNA pseudouridine(38-40) synthase TruA, at 813,592 to 814,401 _03495 Position (kb) 812 813Strain fitness (log2 ratio) -2 -1 0 1at 811.471 kb on - strandat 811.471 kb on - strandat 811.479 kb on + strandat 811.480 kb on - strandat 811.564 kb on - strand, within CA264_03480at 811.641 kb on - strand, within CA264_03480at 811.742 kb on + strand, within CA264_03480at 811.762 kb on - strand, within CA264_03480at 811.925 kb on - strand, within CA264_03480at 811.983 kb on + strand, within CA264_03480at 811.983 kb on + strand, within CA264_03480at 811.983 kb on + strand, within CA264_03480at 811.984 kb on - strand, within CA264_03480at 811.984 kb on - strand, within CA264_03480at 811.989 kb on - strand, within CA264_03480at 812.024 kb on - strand, within CA264_03480at 812.024 kb on - strand, within CA264_03480at 812.041 kb on - strand, within CA264_03480at 812.067 kb on - strand, within CA264_03480at 812.161 kb on + strandat 812.161 kb on + strandat 812.173 kb on + strandat 812.174 kb on - strandat 812.184 kb on + strandat 812.184 kb on + strandat 812.185 kb on - strandat 812.186 kb on + strandat 812.186 kb on + strandat 812.186 kb on + strandat 812.186 kb on + strandat 812.187 kb on - strandat 812.187 kb on - strandat 812.211 kb on - strandat 812.217 kb on - strandat 812.219 kb on + strandat 812.277 kb on + strandat 812.278 kb on - strandat 812.281 kb on - strandat 812.316 kb on + strandat 812.335 kb on + strandat 812.344 kb on - strandat 812.354 kb on - strandat 812.425 kb on - strandat 812.438 kb on + strandat 812.512 kb on + strand, within CA264_03485at 812.528 kb on - strand, within CA264_03485at 812.613 kb on - strandat 812.613 kb on - strandat 812.616 kb on - strandat 812.616 kb on - strandat 812.632 kb on + strandat 812.633 kb on - strandat 812.641 kb on + strandat 812.641 kb on + strandat 812.755 kb on + strandat 812.756 kb on - strandat 812.756 kb on - strandat 812.756 kb on - strandat 812.756 kb on - strandat 812.760 kb on + strandat 812.761 kb on - strandat 812.763 kb on - strandat 812.772 kb on - strandat 812.789 kb on + strandat 812.789 kb on + strandat 812.789 kb on + strandat 812.789 kb on + strandat 812.790 kb on - strandat 812.852 kb on - strandat 813.022 kb on + strand, within CA264_03490at 813.118 kb on + strand, within CA264_03490at 813.218 kb on + strand, within CA264_03490at 813.219 kb on - strand, within CA264_03490at 813.219 kb on - strand, within CA264_03490at 813.263 kb on + strand, within CA264_03490at 813.264 kb on - strand, within CA264_03490at 813.275 kb on + strand, within CA264_03490at 813.281 kb on + strand, within CA264_03490at 813.281 kb on + strand, within CA264_03490at 813.335 kb on + strandat 813.335 kb on + strandat 813.335 kb on + strandat 813.336 kb on - strandat 813.339 kb on + strandat 813.340 kb on - strandat 813.340 kb on - strandat 813.412 kb on + strandat 813.414 kb on + strandat 813.414 kb on + strandat 813.415 kb on - strandat 813.429 kb on + strandat 813.430 kb on - strandat 813.430 kb on - strandat 813.430 kb on - strandat 813.461 kb on + strandat 813.462 kb on - strandat 813.462 kb on - strandat 813.564 kb on + strandat 813.619 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml
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811,471 - -1.0
811,471 - -1.4
811,479 + +0.4
811,480 - -0.5
811,564 - CA264_03480 0.17 +0.4
811,641 - CA264_03480 0.27 -0.5
811,742 + CA264_03480 0.41 +0.8
811,762 - CA264_03480 0.44 -0.2
811,925 - CA264_03480 0.66 -0.1
811,983 + CA264_03480 0.74 -2.0
811,983 + CA264_03480 0.74 -0.2
811,983 + CA264_03480 0.74 -0.8
811,984 - CA264_03480 0.74 -1.2
811,984 - CA264_03480 0.74 -0.6
811,989 - CA264_03480 0.75 -0.7
812,024 - CA264_03480 0.80 +0.1
812,024 - CA264_03480 0.80 +0.3
812,041 - CA264_03480 0.82 -0.2
812,067 - CA264_03480 0.85 +0.3
812,161 + -0.6
812,161 + -0.7
812,173 + -0.9
812,174 - +0.2
812,184 + -1.0
812,184 + +0.2
812,185 - -0.5
812,186 + -0.5
812,186 + -1.0
812,186 + +0.6
812,186 + -0.2
812,187 - -0.3
812,187 - +0.1
812,211 - -0.4
812,217 - -0.2
812,219 + +0.0
812,277 + +0.4
812,278 - -0.4
812,281 - -0.4
812,316 + -0.3
812,335 + -0.1
812,344 - -0.7
812,354 - +0.6
812,425 - -1.1
812,438 + +1.3
812,512 + CA264_03485 0.42 +0.3
812,528 - CA264_03485 0.50 -0.4
812,613 - -1.4
812,613 - -0.9
812,616 - +1.6
812,616 - -1.9
812,632 + +1.6
812,633 - -1.8
812,641 + -0.0
812,641 + +0.4
812,755 + +0.3
812,756 - -0.3
812,756 - -0.3
812,756 - -0.5
812,756 - -0.1
812,760 + +0.4
812,761 - -0.0
812,763 - -1.6
812,772 - -0.8
812,789 + -0.8
812,789 + -0.1
812,789 + -0.4
812,789 + -0.5
812,790 - -0.7
812,852 - -0.0
813,022 + CA264_03490 0.30 +1.1
813,118 + CA264_03490 0.51 +0.1
813,218 + CA264_03490 0.74 +0.1
813,219 - CA264_03490 0.74 -0.1
813,219 - CA264_03490 0.74 -0.7
813,263 + CA264_03490 0.84 -0.6
813,264 - CA264_03490 0.84 -0.6
813,275 + CA264_03490 0.86 -0.1
813,281 + CA264_03490 0.88 -0.6
813,281 + CA264_03490 0.88 +0.1
813,335 + +0.6
813,335 + -0.9
813,335 + -0.0
813,336 - +0.0
813,339 + -1.5
813,340 - +0.6
813,340 - -0.5
813,412 + -0.8
813,414 + -2.7
813,414 + -2.2
813,415 - -0.8
813,429 + -0.5
813,430 - -0.6
813,430 - -0.7
813,430 - -0.2
813,461 + +0.4
813,462 - -1.5
813,462 - -1.1
813,564 + -0.5
813,619 - -0.4

Or see this region's nucleotide sequence