Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02585 and CA264_02590 are separated by 219 nucleotides CA264_02590 and CA264_02595 are separated by 195 nucleotides CA264_02595 and CA264_02600 are separated by 226 nucleotides
CA264_02585: CA264_02585 - hypothetical protein, at 600,986 to 601,609
_02585
CA264_02590: CA264_02590 - ribosomal subunit interface protein, at 601,829 to 602,134
_02590
CA264_02595: CA264_02595 - oxidoreductase, at 602,330 to 603,112
_02595
CA264_02600: CA264_02600 - DsbA family protein, at 603,339 to 603,968
_02600
Position (kb) 602
603
604 Strain fitness (log2 ratio) -2
-1
0
1
2 at 601.440 kb on + strand, within CA264_02585 at 601.440 kb on + strand, within CA264_02585 at 601.441 kb on - strand, within CA264_02585 at 601.445 kb on + strand, within CA264_02585 at 601.446 kb on - strand, within CA264_02585 at 601.446 kb on - strand, within CA264_02585 at 601.487 kb on + strand, within CA264_02585 at 601.559 kb on - strand at 601.559 kb on - strand at 601.647 kb on - strand at 601.667 kb on + strand at 601.668 kb on - strand at 601.668 kb on - strand at 601.669 kb on + strand at 601.669 kb on + strand at 601.669 kb on + strand at 601.674 kb on + strand at 601.680 kb on - strand at 601.759 kb on + strand at 601.815 kb on + strand at 601.835 kb on + strand at 601.836 kb on - strand at 601.836 kb on - strand at 601.837 kb on + strand at 601.857 kb on + strand at 601.869 kb on + strand, within CA264_02590 at 601.870 kb on - strand, within CA264_02590 at 601.885 kb on - strand, within CA264_02590 at 601.903 kb on - strand, within CA264_02590 at 601.903 kb on - strand, within CA264_02590 at 602.000 kb on - strand, within CA264_02590 at 602.049 kb on + strand, within CA264_02590 at 602.050 kb on - strand, within CA264_02590 at 602.078 kb on + strand, within CA264_02590 at 602.079 kb on - strand, within CA264_02590 at 602.177 kb on + strand at 602.177 kb on + strand at 602.178 kb on - strand at 602.180 kb on - strand at 602.187 kb on + strand at 602.187 kb on + strand at 602.285 kb on + strand at 602.286 kb on - strand at 602.287 kb on + strand at 602.287 kb on + strand at 602.287 kb on + strand at 602.287 kb on + strand at 602.291 kb on + strand at 602.292 kb on - strand at 602.292 kb on - strand at 602.299 kb on + strand at 602.300 kb on - strand at 602.300 kb on - strand at 602.300 kb on - strand at 602.302 kb on - strand at 602.316 kb on + strand at 602.317 kb on - strand at 602.342 kb on + strand at 602.388 kb on + strand at 602.388 kb on + strand at 602.398 kb on + strand at 602.435 kb on - strand, within CA264_02595 at 602.505 kb on + strand, within CA264_02595 at 602.506 kb on - strand, within CA264_02595 at 602.526 kb on + strand, within CA264_02595 at 603.052 kb on + strand at 603.106 kb on + strand at 603.117 kb on - strand at 603.117 kb on - strand at 603.131 kb on - strand at 603.137 kb on + strand at 603.144 kb on + strand at 603.145 kb on - strand at 603.152 kb on - strand at 603.226 kb on - strand at 603.226 kb on - strand at 603.302 kb on - strand at 603.360 kb on - strand at 603.372 kb on + strand at 603.530 kb on - strand, within CA264_02600 at 603.530 kb on - strand, within CA264_02600 at 603.530 kb on - strand, within CA264_02600 at 603.564 kb on + strand, within CA264_02600 at 603.564 kb on + strand, within CA264_02600 at 603.564 kb on + strand, within CA264_02600 at 603.564 kb on + strand, within CA264_02600 at 603.565 kb on - strand, within CA264_02600 at 603.607 kb on + strand, within CA264_02600 at 603.844 kb on + strand, within CA264_02600 at 603.868 kb on - strand, within CA264_02600 at 603.879 kb on + strand, within CA264_02600 at 603.880 kb on - strand, within CA264_02600 at 603.922 kb on - strand at 603.999 kb on + strand at 603.999 kb on + strand at 604.000 kb on - strand at 604.007 kb on + strand at 604.007 kb on + strand at 604.008 kb on - strand at 604.008 kb on - strand at 604.011 kb on + strand at 604.011 kb on + strand at 604.073 kb on + strand at 604.079 kb on + strand at 604.079 kb on + strand at 604.080 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 601,440 + CA264_02585 0.73 +1.7 601,440 + CA264_02585 0.73 -0.1 601,441 - CA264_02585 0.73 -0.0 601,445 + CA264_02585 0.74 -0.0 601,446 - CA264_02585 0.74 +0.1 601,446 - CA264_02585 0.74 -1.3 601,487 + CA264_02585 0.80 +1.1 601,559 - -0.3 601,559 - +0.3 601,647 - +2.3 601,667 + -1.4 601,668 - +0.1 601,668 - -0.5 601,669 + -2.6 601,669 + +0.4 601,669 + -0.7 601,674 + +0.7 601,680 - -0.1 601,759 + +0.5 601,815 + -0.4 601,835 + -0.4 601,836 - -0.1 601,836 - -0.1 601,837 + +0.3 601,857 + -0.6 601,869 + CA264_02590 0.13 -0.1 601,870 - CA264_02590 0.13 +1.3 601,885 - CA264_02590 0.18 -0.1 601,903 - CA264_02590 0.24 +1.3 601,903 - CA264_02590 0.24 -1.4 602,000 - CA264_02590 0.56 -0.1 602,049 + CA264_02590 0.72 +0.3 602,050 - CA264_02590 0.72 -0.2 602,078 + CA264_02590 0.81 -0.1 602,079 - CA264_02590 0.82 +0.5 602,177 + -0.7 602,177 + -0.0 602,178 - +0.6 602,180 - +0.3 602,187 + +0.3 602,187 + +0.3 602,285 + -0.6 602,286 - +0.2 602,287 + +0.3 602,287 + +0.4 602,287 + +1.2 602,287 + -0.2 602,291 + +0.4 602,292 - +0.0 602,292 - -0.5 602,299 + -0.3 602,300 - -0.2 602,300 - -0.0 602,300 - -0.2 602,302 - -0.5 602,316 + -0.2 602,317 - -0.3 602,342 + +0.6 602,388 + -0.1 602,388 + -0.2 602,398 + -0.5 602,435 - CA264_02595 0.13 +2.7 602,505 + CA264_02595 0.22 +0.2 602,506 - CA264_02595 0.22 -0.4 602,526 + CA264_02595 0.25 -1.5 603,052 + +0.3 603,106 + +1.9 603,117 - +1.9 603,117 - -0.2 603,131 - +0.0 603,137 + +0.2 603,144 + -0.3 603,145 - +0.3 603,152 - -0.2 603,226 - -0.1 603,226 - -0.9 603,302 - +0.3 603,360 - -0.5 603,372 + -0.6 603,530 - CA264_02600 0.30 +0.1 603,530 - CA264_02600 0.30 -1.0 603,530 - CA264_02600 0.30 -0.4 603,564 + CA264_02600 0.36 +0.2 603,564 + CA264_02600 0.36 -0.1 603,564 + CA264_02600 0.36 +0.0 603,564 + CA264_02600 0.36 +0.2 603,565 - CA264_02600 0.36 -0.0 603,607 + CA264_02600 0.43 -0.2 603,844 + CA264_02600 0.80 +0.3 603,868 - CA264_02600 0.84 -0.4 603,879 + CA264_02600 0.86 -1.8 603,880 - CA264_02600 0.86 -0.1 603,922 - +0.6 603,999 + +0.5 603,999 + +1.1 604,000 - +1.6 604,007 + +0.6 604,007 + -0.2 604,008 - -1.3 604,008 - -0.9 604,011 + +0.2 604,011 + -0.6 604,073 + -0.2 604,079 + -1.4 604,079 + -0.6 604,080 - +0.2
Or see this region's nucleotide sequence