Experiment: Hydantoin (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu6148 and Atu6149 are separated by 162 nucleotides Atu6149 and Atu6150 are separated by 2 nucleotides
Atu6147: Atu6147 - conserved hypothetical protein, at 165,760 to 166,743
Atu6147
Atu6148: Atu6148 - transposase, at 166,498 to 167,382
Atu6148
Atu6149: Atu6149 - hypothetical protein, at 167,545 to 167,880
Atu6149
Atu6150: Atu6150 - P-450 monooxygenase, at 167,883 to 169,142
Atu6150
Position (kb) 167
168 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 166.564 kb on + strand at 166.592 kb on - strand at 166.607 kb on - strand at 166.613 kb on + strand at 166.614 kb on + strand at 166.634 kb on + strand at 166.642 kb on - strand at 166.657 kb on + strand at 166.662 kb on + strand at 166.664 kb on - strand at 166.670 kb on - strand at 166.670 kb on - strand at 166.692 kb on - strand at 166.741 kb on - strand at 166.746 kb on - strand, within Atu6148 at 166.793 kb on + strand, within Atu6148 at 166.862 kb on - strand, within Atu6148 at 166.871 kb on - strand, within Atu6148 at 166.878 kb on - strand, within Atu6148 at 166.902 kb on + strand, within Atu6148 at 166.902 kb on + strand, within Atu6148 at 166.910 kb on - strand, within Atu6148 at 166.915 kb on + strand, within Atu6148 at 167.022 kb on + strand, within Atu6148 at 167.030 kb on - strand, within Atu6148 at 167.030 kb on - strand, within Atu6148 at 167.058 kb on + strand, within Atu6148 at 167.058 kb on + strand, within Atu6148 at 167.110 kb on + strand, within Atu6148 at 167.128 kb on - strand, within Atu6148 at 167.135 kb on + strand, within Atu6148 at 167.143 kb on - strand, within Atu6148 at 167.169 kb on + strand, within Atu6148 at 167.179 kb on - strand, within Atu6148 at 167.205 kb on + strand, within Atu6148 at 167.211 kb on - strand, within Atu6148 at 167.251 kb on + strand, within Atu6148 at 167.254 kb on - strand, within Atu6148 at 167.257 kb on - strand, within Atu6148 at 167.282 kb on - strand, within Atu6148 at 167.284 kb on + strand, within Atu6148 at 167.284 kb on + strand, within Atu6148 at 167.287 kb on - strand, within Atu6148 at 167.292 kb on - strand, within Atu6148 at 167.292 kb on - strand, within Atu6148 at 167.296 kb on + strand at 167.304 kb on - strand at 167.306 kb on + strand at 167.439 kb on + strand at 167.471 kb on + strand at 167.515 kb on + strand at 167.556 kb on + strand at 167.563 kb on - strand at 167.631 kb on + strand, within Atu6149 at 167.631 kb on + strand, within Atu6149 at 167.639 kb on - strand, within Atu6149 at 167.639 kb on - strand, within Atu6149 at 167.659 kb on + strand, within Atu6149 at 167.667 kb on - strand, within Atu6149 at 167.667 kb on - strand, within Atu6149 at 167.670 kb on + strand, within Atu6149 at 167.674 kb on + strand, within Atu6149 at 167.674 kb on + strand, within Atu6149 at 167.689 kb on - strand, within Atu6149 at 167.689 kb on - strand, within Atu6149 at 167.896 kb on + strand at 167.964 kb on + strand at 168.037 kb on - strand, within Atu6150 at 168.069 kb on + strand, within Atu6150 at 168.077 kb on - strand, within Atu6150 at 168.183 kb on - strand, within Atu6150 at 168.259 kb on - strand, within Atu6150 at 168.271 kb on - strand, within Atu6150 at 168.312 kb on - strand, within Atu6150 at 168.442 kb on + strand, within Atu6150 at 168.442 kb on + strand, within Atu6150 at 168.442 kb on + strand, within Atu6150 at 168.450 kb on - strand, within Atu6150 at 168.450 kb on - strand, within Atu6150 at 168.450 kb on - strand, within Atu6150 at 168.450 kb on - strand, within Atu6150 at 168.450 kb on - strand, within Atu6150 at 168.450 kb on - strand, within Atu6150 at 168.450 kb on - strand, within Atu6150 at 168.487 kb on - strand, within Atu6150 at 168.493 kb on - strand, within Atu6150 at 168.507 kb on + strand, within Atu6150 at 168.538 kb on + strand, within Atu6150 at 168.550 kb on - strand, within Atu6150 at 168.550 kb on - strand, within Atu6150 at 168.572 kb on + strand, within Atu6150 at 168.580 kb on - strand, within Atu6150 at 168.600 kb on + strand, within Atu6150 at 168.644 kb on + strand, within Atu6150 at 168.645 kb on + strand, within Atu6150 at 168.688 kb on + strand, within Atu6150 at 168.711 kb on + strand, within Atu6150 at 168.723 kb on - strand, within Atu6150 at 168.729 kb on - strand, within Atu6150 at 168.767 kb on + strand, within Atu6150 at 168.786 kb on - strand, within Atu6150 at 168.795 kb on + strand, within Atu6150 at 168.864 kb on - strand, within Atu6150 at 168.870 kb on - strand, within Atu6150
Per-strain Table
Position Strand Gene LocusTag Fraction Hydantoin (N) remove 166,564 + +2.4 166,592 - +0.4 166,607 - +0.4 166,613 + +0.8 166,614 + +3.2 166,634 + +0.5 166,642 - +2.1 166,657 + +0.3 166,662 + +1.5 166,664 - -0.1 166,670 - -1.2 166,670 - +0.4 166,692 - +3.9 166,741 - +0.8 166,746 - Atu6148 0.28 -0.6 166,793 + Atu6148 0.33 +1.0 166,862 - Atu6148 0.41 +1.5 166,871 - Atu6148 0.42 -1.4 166,878 - Atu6148 0.43 +0.5 166,902 + Atu6148 0.46 -1.1 166,902 + Atu6148 0.46 +0.7 166,910 - Atu6148 0.47 +1.6 166,915 + Atu6148 0.47 -0.1 167,022 + Atu6148 0.59 -0.7 167,030 - Atu6148 0.60 +0.9 167,030 - Atu6148 0.60 +1.3 167,058 + Atu6148 0.63 -0.3 167,058 + Atu6148 0.63 +0.8 167,110 + Atu6148 0.69 -0.9 167,128 - Atu6148 0.71 -0.0 167,135 + Atu6148 0.72 +0.4 167,143 - Atu6148 0.73 +0.9 167,169 + Atu6148 0.76 +1.9 167,179 - Atu6148 0.77 +0.5 167,205 + Atu6148 0.80 +2.4 167,211 - Atu6148 0.81 -0.1 167,251 + Atu6148 0.85 +1.3 167,254 - Atu6148 0.85 +0.2 167,257 - Atu6148 0.86 +0.1 167,282 - Atu6148 0.89 +1.4 167,284 + Atu6148 0.89 +1.9 167,284 + Atu6148 0.89 +0.3 167,287 - Atu6148 0.89 +0.1 167,292 - Atu6148 0.90 +1.4 167,292 - Atu6148 0.90 -0.8 167,296 + +0.7 167,304 - +0.3 167,306 + -0.5 167,439 + +0.5 167,471 + +1.0 167,515 + +0.6 167,556 + -0.4 167,563 - +0.4 167,631 + Atu6149 0.26 +0.1 167,631 + Atu6149 0.26 +1.4 167,639 - Atu6149 0.28 +1.4 167,639 - Atu6149 0.28 +1.1 167,659 + Atu6149 0.34 +2.4 167,667 - Atu6149 0.36 +0.7 167,667 - Atu6149 0.36 -0.7 167,670 + Atu6149 0.37 +0.6 167,674 + Atu6149 0.38 -0.8 167,674 + Atu6149 0.38 +1.7 167,689 - Atu6149 0.43 -0.1 167,689 - Atu6149 0.43 +1.3 167,896 + +1.9 167,964 + -0.2 168,037 - Atu6150 0.12 +3.7 168,069 + Atu6150 0.15 -0.4 168,077 - Atu6150 0.15 +2.9 168,183 - Atu6150 0.24 +1.3 168,259 - Atu6150 0.30 +2.0 168,271 - Atu6150 0.31 +0.7 168,312 - Atu6150 0.34 +0.6 168,442 + Atu6150 0.44 -0.4 168,442 + Atu6150 0.44 +0.3 168,442 + Atu6150 0.44 -0.6 168,450 - Atu6150 0.45 +1.0 168,450 - Atu6150 0.45 +0.9 168,450 - Atu6150 0.45 +0.9 168,450 - Atu6150 0.45 -0.4 168,450 - Atu6150 0.45 -1.7 168,450 - Atu6150 0.45 +1.7 168,450 - Atu6150 0.45 -0.6 168,487 - Atu6150 0.48 +0.3 168,493 - Atu6150 0.48 +3.2 168,507 + Atu6150 0.50 +0.6 168,538 + Atu6150 0.52 -0.6 168,550 - Atu6150 0.53 +0.2 168,550 - Atu6150 0.53 +3.4 168,572 + Atu6150 0.55 -1.5 168,580 - Atu6150 0.55 +1.9 168,600 + Atu6150 0.57 +0.6 168,644 + Atu6150 0.60 +0.8 168,645 + Atu6150 0.60 +0.1 168,688 + Atu6150 0.64 +2.4 168,711 + Atu6150 0.66 +2.1 168,723 - Atu6150 0.67 -0.5 168,729 - Atu6150 0.67 -0.4 168,767 + Atu6150 0.70 +0.7 168,786 - Atu6150 0.72 -0.5 168,795 + Atu6150 0.72 +0.8 168,864 - Atu6150 0.78 -0.0 168,870 - Atu6150 0.78 -0.1
Or see this region's nucleotide sequence